Protein–RNA interactions for Protein: P07858

CTSB, Cathepsin B, humanhuman

Predictions only

Length 339 aa.

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Protein RNA Prediction (catRAPID) Interaction (ENCODE eCLIP)
Gene UniProt Accession Transcript Symbol Ensembl Transcript ID Length Transcript Status Prediction Score Prediction z-Score p-Value Fold Change
CTSBP07858 PAX4-207ENST00000611453 1235 ntTSL 5 BASIC14.2□□□□□ -0.14
CTSBP07858 AL136301.1-201ENST00000615830 422 ntBASIC14.2□□□□□ -0.14
CTSBP07858 AC024941.2-201ENST00000625763 493 ntTSL 2 BASIC14.2□□□□□ -0.14
CTSBP07858 REPIN1-209ENST00000479668 3182 ntTSL 2 BASIC14.2□□□□□ -0.14
CTSBP07858 HVCN1-202ENST00000356742 2189 ntAPPRIS P1 TSL 1 (best) BASIC14.2□□□□□ -0.14
CTSBP07858 GLIPR1L2-204ENST00000550916 2609 ntAPPRIS ALT2 TSL 1 (best) BASIC14.2□□□□□ -0.14
CTSBP07858 COL9A1-204ENST00000370496 1372 ntTSL 1 (best) BASIC14.2□□□□□ -0.14
CTSBP07858 HSFX2-201ENST00000598963 1365 ntAPPRIS P1 TSL 1 (best) BASIC14.2□□□□□ -0.14
CTSBP07858 AC020907.1-201ENST00000616460 1350 ntBASIC14.2□□□□□ -0.14
CTSBP07858 AL359915.2-205ENST00000418015 1529 ntTSL 2 BASIC14.2□□□□□ -0.14
CTSBP07858 RGS6-218ENST00000556437 1689 ntAPPRIS ALT1 TSL 1 (best) BASIC14.2□□□□□ -0.14
CTSBP07858 SMYD1-203ENST00000444564 1816 ntTSL 5 BASIC14.2□□□□□ -0.14
CTSBP07858 AC007292.2-201ENST00000593524 1812 ntBASIC14.2□□□□□ -0.14
CTSBP07858 FAM189A2-201ENST00000257515 2423 ntAPPRIS P1 TSL 1 (best) BASIC14.2□□□□□ -0.14
CTSBP07858 USP35-204ENST00000530267 2419 ntTSL 2 BASIC14.2□□□□□ -0.14
CTSBP07858 ALDOA-228ENST00000627059 2402 ntAPPRIS ALT1 TSL 5 BASIC14.2□□□□□ -0.14
CTSBP07858 UGT8-201ENST00000310836 4084 ntAPPRIS P1 TSL 1 (best) BASIC14.2□□□□□ -0.14
CTSBP07858 GDF6-201ENST00000287020 3701 ntAPPRIS P1 TSL 1 (best) BASIC14.19□□□□□ -0.14
CTSBP07858 MAP3K11-201ENST00000309100 3566 ntAPPRIS P1 TSL 1 (best) BASIC14.19□□□□□ -0.14
CTSBP07858 SEPT9-228ENST00000590294 2816 ntAPPRIS ALT2 TSL 5 BASIC14.19□□□□□ -0.14
CTSBP07858 EDN3-201ENST00000311585 2655 ntAPPRIS ALT2 TSL 1 (best) BASIC14.19□□□□□ -0.14
CTSBP07858 LINC00327-203ENST00000576696 1308 ntTSL 1 (best) BASIC14.19□□□□□ -0.14
CTSBP07858 SLC8A3-202ENST00000356921 5250 ntAPPRIS P3 TSL 1 (best) BASIC14.19□□□□□ -0.14
CTSBP07858 TMEM209-202ENST00000462753 2322 ntAPPRIS ALT1 TSL 5 BASIC14.19□□□□□ -0.14
CTSBP07858 ZFP41-201ENST00000330701 4797 ntAPPRIS P1 TSL 2 BASIC14.19□□□□□ -0.14
CTSBP07858 BIRC2-214ENST00000621637 3331 ntTSL 5 BASIC14.19□□□□□ -0.14
CTSBP07858 LINC01101-201ENST00000622953 1884 ntBASIC14.19□□□□□ -0.14
CTSBP07858 CNOT8-204ENST00000517876 2708 ntAPPRIS P1 TSL 5 BASIC14.19□□□□□ -0.14
CTSBP07858 NEK7-202ENST00000367385 4149 ntAPPRIS P1 TSL 5 BASIC14.19□□□□□ -0.14
CTSBP07858 TSPO-201ENST00000329563 955 ntAPPRIS P1 TSL 3 BASIC14.19□□□□□ -0.14
CTSBP07858 CFLAR-203ENST00000341222 1283 ntTSL 1 (best) BASIC14.19□□□□□ -0.14
CTSBP07858 HIST3H3-201ENST00000366696 481 ntAPPRIS P1 BASIC14.19□□□□□ -0.14
CTSBP07858 TREML1-201ENST00000373127 1194 ntAPPRIS ALT2 TSL 1 (best) BASIC14.19□□□□□ -0.14
CTSBP07858 CDKN1A-202ENST00000373711 793 ntAPPRIS P1 TSL 5 BASIC14.19□□□□□ -0.14
CTSBP07858 ZFAND4-203ENST00000374366 3821 ntTSL 1 (best) BASIC14.19□□□□□ -0.14
CTSBP07858 ARHGAP39-202ENST00000377307 4673 ntAPPRIS P3 TSL 5 BASIC14.19□□□□□ -0.14
CTSBP07858 SMS-201ENST00000379404 1174 ntTSL 3 BASIC14.19□□□□□ -0.14
CTSBP07858 MIR1247-201ENST00000408206 136 ntBASIC14.19□□□□□ -0.14
CTSBP07858 DYNC1I1-203ENST00000413338 958 ntTSL 2 BASIC14.19□□□□□ -0.14
CTSBP07858 AC006033.1-201ENST00000440505 426 ntBASIC14.19□□□□□ -0.14
CTSBP07858 MRPS25-203ENST00000444840 1281 ntTSL 2 BASIC14.19□□□□□ -0.14
CTSBP07858 AC025154.1-201ENST00000552806 560 ntTSL 5 BASIC14.19□□□□□ -0.14
CTSBP07858 JKAMP-207ENST00000554271 2137 ntTSL 2 BASIC14.19□□□□□ -0.14
CTSBP07858 TXNDC17-202ENST00000570330 459 ntTSL 2 BASIC14.19□□□□□ -0.14
CTSBP07858 AC007861.2-201ENST00000573819 571 ntTSL 4 BASIC14.19□□□□□ -0.14
CTSBP07858 TSPO-206ENST00000583777 636 ntTSL 1 (best) BASIC14.19□□□□□ -0.14
CTSBP07858 MRPL34-203ENST00000595444 863 ntAPPRIS ALT2 TSL 3 BASIC14.19□□□□□ -0.14
CTSBP07858 LINC01672-205ENST00000635092 633 ntTSL 5 BASIC14.19□□□□□ -0.14
CTSBP07858 ABTB1-202ENST00000453791 1961 ntTSL 1 (best) BASIC14.19□□□□□ -0.14
CTSBP07858 DLGAP2-215ENST00000637795 3380 ntTSL 5 BASIC14.19□□□□□ -0.14
CTSBP07858 LINC01136-203ENST00000457348 2539 ntTSL 2 BASIC14.19□□□□□ -0.14
CTSBP07858 HDAC5-201ENST00000225983 5326 ntAPPRIS P3 TSL 5 BASIC14.19□□□□□ -0.14
CTSBP07858 ZSWIM8-223ENST00000605216 6004 ntAPPRIS P2 TSL 1 (best) BASIC14.19□□□□□ -0.14
CTSBP07858 FKBP6-201ENST00000252037 1500 ntAPPRIS P3 TSL 1 (best) BASIC14.19□□□□□ -0.14
CTSBP07858 MAGED4B-207ENST00000485287 2618 ntTSL 1 (best) BASIC14.19□□□□□ -0.14
CTSBP07858 HOGA1-202ENST00000370646 2488 ntAPPRIS P1 TSL 1 (best) BASIC14.19□□□□□ -0.14
CTSBP07858 PUDP-202ENST00000412827 1376 ntTSL 2 BASIC14.19□□□□□ -0.14
CTSBP07858 VSIG10-202ENST00000359236 4946 ntAPPRIS P1 TSL 1 (best) BASIC14.19□□□□□ -0.14
CTSBP07858 AHDC1-202ENST00000374011 6438 ntAPPRIS P1 TSL 5 BASIC14.19□□□□□ -0.14
CTSBP07858 MYH14-203ENST00000425460 6811 ntAPPRIS P3 TSL 5 BASIC14.19□□□□□ -0.14
CTSBP07858 COL25A1-203ENST00000399132 2724 ntAPPRIS P4 TSL 5 BASIC14.19□□□□□ -0.14
CTSBP07858 KIAA1147-202ENST00000536163 7296 ntAPPRIS P1 TSL 1 (best) BASIC14.19□□□□□ -0.14
CTSBP07858 CALD1-206ENST00000424922 2124 ntTSL 1 (best) BASIC14.18□□□□□ -0.14
CTSBP07858 PLTP-201ENST00000354050 1731 ntTSL 1 (best) BASIC14.18□□□□□ -0.14
CTSBP07858 C9orf172-201ENST00000436881 4387 ntAPPRIS P1 BASIC14.18□□□□□ -0.14
CTSBP07858 CD27-201ENST00000266557 1338 ntAPPRIS P1 TSL 1 (best) BASIC14.18□□□□□ -0.14
CTSBP07858 CAPN2-201ENST00000295006 3573 ntAPPRIS P1 TSL 1 (best) BASIC14.18□□□□□ -0.14
CTSBP07858 CNOT3-204ENST00000447684 2765 ntTSL 2 BASIC14.18□□□□□ -0.14
CTSBP07858 LAT2-202ENST00000344995 2363 ntAPPRIS P2 TSL 1 (best) BASIC14.18□□□□□ -0.14
CTSBP07858 PABPC4-202ENST00000372857 3048 ntTSL 1 (best) BASIC14.18□□□□□ -0.14
CTSBP07858 GPER1-202ENST00000397088 2639 ntAPPRIS P1 TSL 1 (best) BASIC14.18□□□□□ -0.14
CTSBP07858 NMUR1-201ENST00000305141 3298 ntAPPRIS P1 TSL 1 (best) BASIC14.18□□□□□ -0.14
CTSBP07858 ZNF286A-218ENST00000583566 1806 ntAPPRIS P1 TSL 1 (best) BASIC14.18□□□□□ -0.14
CTSBP07858 NFATC4-202ENST00000413692 5700 ntAPPRIS ALT2 TSL 1 (best) BASIC14.18□□□□□ -0.14
CTSBP07858 TNRC18P2-201ENST00000417666 2714 ntBASIC14.18□□□□□ -0.14
CTSBP07858 MARS-233ENST00000628866 2583 ntTSL 5 BASIC14.18□□□□□ -0.14
CTSBP07858 GSTT2B-201ENST00000290765 1099 ntAPPRIS P1 TSL 1 (best) BASIC14.18□□□□□ -0.14
CTSBP07858 CLRN1-203ENST00000328863 738 ntTSL 1 (best) BASIC14.18□□□□□ -0.14
CTSBP07858 FAM24B-202ENST00000368898 745 ntAPPRIS P1 TSL 1 (best) BASIC14.18□□□□□ -0.14
CTSBP07858 GATD1-203ENST00000397472 790 ntTSL 1 (best) BASIC14.18□□□□□ -0.14
CTSBP07858 SERF2-209ENST00000409646 559 ntTSL 4 BASIC14.18□□□□□ -0.14
CTSBP07858 GPAA1P2-201ENST00000417923 928 ntBASIC14.18□□□□□ -0.14
CTSBP07858 FAM153B-214ENST00000512862 1071 ntAPPRIS ALT2 TSL 2 BASIC14.18□□□□□ -0.14
CTSBP07858 AC113192.2-201ENST00000525320 308 ntTSL 3 BASIC14.18□□□□□ -0.14
CTSBP07858 BLOC1S1-205ENST00000551926 531 ntTSL 5 BASIC14.18□□□□□ -0.14
CTSBP07858 NIP7-208ENST00000569637 1099 ntTSL 2 BASIC14.18□□□□□ -0.14
CTSBP07858 AC108134.4-201ENST00000570700 302 ntTSL 3 BASIC14.18□□□□□ -0.14
CTSBP07858 ECSIT-201ENST00000252440 1501 ntAPPRIS ALT2 TSL 1 (best) BASIC14.18□□□□□ -0.14
CTSBP07858 RCOR3-203ENST00000419091 2041 ntAPPRIS P1 TSL 2 BASIC14.18□□□□□ -0.14
CTSBP07858 ARID1A-205ENST00000457599 6268 ntAPPRIS ALT2 TSL 5 BASIC14.18□□□□□ -0.14
CTSBP07858 DAB2IP-205ENST00000408936 6784 ntAPPRIS ALT2 TSL 5 BASIC14.18□□□□□ -0.14
CTSBP07858 CTSD-201ENST00000236671 2123 ntAPPRIS P2 TSL 1 (best) BASIC14.18□□□□□ -0.14
CTSBP07858 CHD1L-203ENST00000369259 2358 ntTSL 1 (best) BASIC14.18□□□□□ -0.14
CTSBP07858 CBS-204ENST00000398165 2605 ntAPPRIS P1 TSL 1 (best) BASIC14.18□□□□□ -0.14
CTSBP07858 TP53I11-208ENST00000525680 2647 ntAPPRIS P1 TSL 2 BASIC14.18□□□□□ -0.14
CTSBP07858 AC010547.4-201ENST00000561754 1378 ntAPPRIS P1 TSL 5 BASIC14.18□□□□□ -0.14
CTSBP07858 MARVELD1-201ENST00000285605 3221 ntAPPRIS P1 TSL 2 BASIC14.18□□□□□ -0.14
CTSBP07858 TIMP2-201ENST00000262768 3652 ntAPPRIS P1 TSL 1 (best) BASIC14.18□□□□□ -0.14
CTSBP07858 AL391244.1-206ENST00000447725 1843 ntTSL 5 BASIC14.18□□□□□ -0.14
CTSBP07858 IRF8-201ENST00000268638 3030 ntAPPRIS P1 TSL 1 (best) BASIC14.17□□□□□ -0.14
Retrieved 100 of 98,524 protein–RNA pairs in 46.2 ms