Protein–RNA interactions for Protein: P05114

HMGN1, Non-histone chromosomal protein HMG-14, humanhuman

Predictions only

Length 100 aa.

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Protein RNA Prediction (catRAPID) Interaction (ENCODE eCLIP)
Gene UniProt Accession Transcript Symbol Ensembl Transcript ID Length Transcript Status Prediction Score Prediction z-Score p-Value Fold Change
HMGN1P05114 ST6GAL1-201ENST00000169298 4645 ntAPPRIS P1 TSL 1 (best) BASIC13.72□□□□□ -0.21
HMGN1P05114 NADSYN1-216ENST00000530055 2416 ntTSL 2 BASIC13.72□□□□□ -0.21
HMGN1P05114 SLC29A1-201ENST00000371708 2159 ntAPPRIS P1 TSL 1 (best) BASIC13.72□□□□□ -0.21
HMGN1P05114 ECHDC1-220ENST00000528402 1449 ntTSL 1 (best) BASIC13.72□□□□□ -0.21
HMGN1P05114 ZNF84-215ENST00000543758 3501 ntAPPRIS ALT2 TSL 5 BASIC13.72□□□□□ -0.21
HMGN1P05114 DDX20-201ENST00000369702 4212 ntAPPRIS P1 TSL 1 (best) BASIC13.72□□□□□ -0.21
HMGN1P05114 PLEKHO2-201ENST00000323544 3720 ntAPPRIS P1 TSL 1 (best) BASIC13.72□□□□□ -0.21
HMGN1P05114 SACM1L-201ENST00000389061 3723 ntAPPRIS P1 TSL 1 (best) BASIC13.72□□□□□ -0.21
HMGN1P05114 KCNT1-209ENST00000490355 3708 ntAPPRIS ALT2 TSL 5 BASIC13.72□□□□□ -0.21
HMGN1P05114 GPR132-203ENST00000539291 2779 ntAPPRIS P3 TSL 2 BASIC13.71□□□□□ -0.21
HMGN1P05114 IL6R-201ENST00000344086 3217 ntAPPRIS ALT2 TSL 1 (best) BASIC13.71□□□□□ -0.21
HMGN1P05114 MAGED4B-202ENST00000360134 2510 ntAPPRIS ALT2 TSL 1 (best) BASIC13.71□□□□□ -0.21
HMGN1P05114 BAIAP2-220ENST00000575712 2512 ntAPPRIS ALT2 TSL 1 (best) BASIC13.71□□□□□ -0.21
HMGN1P05114 FAM174A-201ENST00000312637 1356 ntAPPRIS P1 TSL 1 (best) BASIC13.71□□□□□ -0.21
HMGN1P05114 RNF183-203ENST00000441031 1366 ntAPPRIS P1 TSL 1 (best) BASIC13.71□□□□□ -0.21
HMGN1P05114 SPATS2-203ENST00000547865 1810 ntTSL 2 BASIC13.71□□□□□ -0.21
HMGN1P05114 PCM1-201ENST00000325083 6820 ntAPPRIS P1 TSL 1 (best) BASIC13.71□□□□□ -0.21
HMGN1P05114 C10orf71-201ENST00000374144 5230 ntAPPRIS P1 TSL 1 (best) BASIC13.71□□□□□ -0.21
HMGN1P05114 PCDHGA6-202ENST00000610583 5650 ntAPPRIS P1 BASIC13.71□□□□□ -0.21
HMGN1P05114 RHD-202ENST00000342055 1557 ntTSL 1 (best) BASIC13.71□□□□□ -0.21
HMGN1P05114 C21orf58-202ENST00000397679 2900 ntAPPRIS ALT2 TSL 2 BASIC13.71□□□□□ -0.21
HMGN1P05114 UBE2D1-201ENST00000373910 2659 ntAPPRIS P1 TSL 1 (best) BASIC13.71□□□□□ -0.21
HMGN1P05114 SLC12A5-211ENST00000616933 6166 ntTSL 5 BASIC13.71□□□□□ -0.21
HMGN1P05114 SFMBT2-203ENST00000379713 2402 ntTSL 2 BASIC13.71□□□□□ -0.21
HMGN1P05114 MYLK-208ENST00000475616 5745 ntAPPRIS ALT2 TSL 1 (best) BASIC13.71□□□□□ -0.21
HMGN1P05114 TMEM5-205ENST00000537373 1966 ntTSL 1 (best) BASIC13.71□□□□□ -0.21
HMGN1P05114 PCDHA11-201ENST00000398640 6115 ntAPPRIS P3 TSL 1 (best) BASIC13.71□□□□□ -0.21
HMGN1P05114 ENAH-203ENST00000366843 2758 ntAPPRIS ALT2 TSL 1 (best) BASIC13.71□□□□□ -0.21
HMGN1P05114 PDCD2L-201ENST00000246535 1171 ntAPPRIS P1 TSL 1 (best) BASIC13.71□□□□□ -0.21
HMGN1P05114 RAB2A-201ENST00000262646 3848 ntAPPRIS P1 TSL 1 (best) BASIC13.71□□□□□ -0.21
HMGN1P05114 NMU-201ENST00000264218 816 ntAPPRIS P1 TSL 1 (best) BASIC13.71□□□□□ -0.21
HMGN1P05114 PKIG-203ENST00000372887 769 ntTSL 3 BASIC13.71□□□□□ -0.21
HMGN1P05114 HFE-208ENST00000397022 1280 ntTSL 1 (best) BASIC13.71□□□□□ -0.21
HMGN1P05114 DSCR3-204ENST00000399001 821 ntTSL 2 BASIC13.71□□□□□ -0.21
HMGN1P05114 PLAC9P1-202ENST00000433290 400 ntTSL 2 BASIC13.71□□□□□ -0.21
HMGN1P05114 AC004865.2-202ENST00000444348 852 ntTSL 3 BASIC13.71□□□□□ -0.21
HMGN1P05114 LINC00899-202ENST00000444890 493 ntTSL 3 BASIC13.71□□□□□ -0.21
HMGN1P05114 PTPRG-AS1-205ENST00000475371 733 ntTSL 3 BASIC13.71□□□□□ -0.21
HMGN1P05114 AC092910.3-201ENST00000484076 969 ntTSL 1 (best) BASIC13.71□□□□□ -0.21
HMGN1P05114 CUTA-210ENST00000488034 769 ntAPPRIS ALT1 TSL 2 BASIC13.71□□□□□ -0.21
HMGN1P05114 HFE-214ENST00000488199 781 ntTSL 1 (best) BASIC13.71□□□□□ -0.21
HMGN1P05114 MIR130B-201ENST00000498589 1093 ntTSL 5 BASIC13.71□□□□□ -0.21
HMGN1P05114 AC022447.6-201ENST00000515522 438 ntBASIC13.71□□□□□ -0.21
HMGN1P05114 AKR1E2-212ENST00000532248 844 ntTSL 1 (best) BASIC13.71□□□□□ -0.21
HMGN1P05114 AP000721.1-201ENST00000535431 559 ntAPPRIS P1 TSL 5 BASIC13.71□□□□□ -0.21
HMGN1P05114 COQ7-202ENST00000544894 819 ntAPPRIS ALT2 TSL 1 (best) BASIC13.71□□□□□ -0.21
HMGN1P05114 AC051619.7-201ENST00000568314 623 ntBASIC13.71□□□□□ -0.21
HMGN1P05114 MIR3687-2-201ENST00000577708 61 ntBASIC13.71□□□□□ -0.21
HMGN1P05114 MIR3687-1-201ENST00000614492 61 ntBASIC13.71□□□□□ -0.21
HMGN1P05114 HOTTIP_1.1-201ENST00000620415 57 ntBASIC13.71□□□□□ -0.21
HMGN1P05114 MCCC2-209ENST00000629193 1128 ntTSL 1 (best) BASIC13.71□□□□□ -0.21
HMGN1P05114 HIST1H3D-202ENST00000635200 948 ntAPPRIS P1 TSL 3 BASIC13.71□□□□□ -0.21
HMGN1P05114 AL359644.1-202ENST00000637541 571 ntTSL 3 BASIC13.71□□□□□ -0.21
HMGN1P05114 C7orf49-201ENST00000393114 1482 ntAPPRIS P1 TSL 1 (best) BASIC13.71□□□□□ -0.21
HMGN1P05114 GEMIN7-201ENST00000270257 1657 ntAPPRIS P1 TSL 1 (best) BASIC13.71□□□□□ -0.21
HMGN1P05114 LINC00221-201ENST00000603633 1656 ntTSL 2 BASIC13.71□□□□□ -0.21
HMGN1P05114 CDK17-201ENST00000261211 4157 ntAPPRIS P1 TSL 1 (best) BASIC13.71□□□□□ -0.21
HMGN1P05114 FGFR1-202ENST00000335922 4157 ntTSL 1 (best) BASIC13.71□□□□□ -0.21
HMGN1P05114 LRRC20-204ENST00000373224 3095 ntAPPRIS P1 TSL 2 BASIC13.71□□□□□ -0.22
HMGN1P05114 RADIL-201ENST00000399583 3689 ntAPPRIS P1 TSL 5 BASIC13.71□□□□□ -0.22
HMGN1P05114 REPS1-221ENST00000626459 3665 ntTSL 5 BASIC13.71□□□□□ -0.22
HMGN1P05114 GPR83-201ENST00000243673 4282 ntAPPRIS P1 TSL 1 (best) BASIC13.71□□□□□ -0.22
HMGN1P05114 MPDU1-201ENST00000250124 1601 ntAPPRIS P1 TSL 1 (best) BASIC13.71□□□□□ -0.22
HMGN1P05114 C1R-201ENST00000535233 2211 ntTSL 2 BASIC13.71□□□□□ -0.22
HMGN1P05114 CCSER2-203ENST00000372088 7657 ntTSL 2 BASIC13.71□□□□□ -0.22
HMGN1P05114 ZNF570-201ENST00000330173 5559 ntAPPRIS P1 TSL 1 (best) BASIC13.71□□□□□ -0.22
HMGN1P05114 ADI1-201ENST00000327435 2391 ntAPPRIS P1 TSL 1 (best) BASIC13.71□□□□□ -0.22
HMGN1P05114 TATDN3-202ENST00000366974 2389 ntAPPRIS P3 TSL 1 (best) BASIC13.71□□□□□ -0.22
HMGN1P05114 SERTAD2-201ENST00000313349 5549 ntAPPRIS P1 TSL 1 (best) BASIC13.71□□□□□ -0.22
HMGN1P05114 ITGA6-202ENST00000409080 5306 ntTSL 2 BASIC13.71□□□□□ -0.22
HMGN1P05114 PREP-201ENST00000369110 2905 ntAPPRIS P1 TSL 1 (best) BASIC13.7□□□□□ -0.22
HMGN1P05114 KIAA0319-201ENST00000378214 6802 ntAPPRIS P3 TSL 1 (best) BASIC13.7□□□□□ -0.22
HMGN1P05114 CDH20-201ENST00000262717 3882 ntAPPRIS P1 TSL 2 BASIC13.7□□□□□ -0.22
HMGN1P05114 CCDC32-201ENST00000358005 1704 ntAPPRIS P1 TSL 2 BASIC13.7□□□□□ -0.22
HMGN1P05114 BEND5-201ENST00000371833 1716 ntAPPRIS P1 TSL 1 (best) BASIC13.7□□□□□ -0.22
HMGN1P05114 PTGES3-202ENST00000414274 1547 ntTSL 2 BASIC13.7□□□□□ -0.22
HMGN1P05114 SIGLECL1-208ENST00000614422 1516 ntAPPRIS P3 TSL 1 (best) BASIC13.7□□□□□ -0.22
HMGN1P05114 B3GNT3-202ENST00000595387 1349 ntAPPRIS P1 TSL 1 (best) BASIC13.7□□□□□ -0.22
HMGN1P05114 CYB561-201ENST00000360793 3001 ntAPPRIS P1 TSL 1 (best) BASIC13.7□□□□□ -0.22
HMGN1P05114 NFS1-203ENST00000374092 3012 ntAPPRIS P1 TSL 1 (best) BASIC13.7□□□□□ -0.22
HMGN1P05114 GABRA1-201ENST00000023897 2083 ntAPPRIS P1 TSL 1 (best) BASIC13.7□□□□□ -0.22
HMGN1P05114 MARK4-201ENST00000262891 3573 ntAPPRIS P1 TSL 1 (best) BASIC13.7□□□□□ -0.22
HMGN1P05114 COL4A3-202ENST00000396578 8097 ntAPPRIS P1 TSL 1 (best) BASIC13.7□□□□□ -0.22
HMGN1P05114 NEK2-201ENST00000366998 1865 ntTSL 1 (best) BASIC13.7□□□□□ -0.22
HMGN1P05114 FUK-202ENST00000378912 3925 ntTSL 2 BASIC13.7□□□□□ -0.22
HMGN1P05114 CRYBG2-201ENST00000308182 5245 ntAPPRIS P5 TSL 5 BASIC13.7□□□□□ -0.22
HMGN1P05114 ALG3-207ENST00000455059 1697 ntTSL 5 BASIC13.7□□□□□ -0.22
HMGN1P05114 CD300LG-206ENST00000588884 1459 ntAPPRIS ALT2 TSL 2 BASIC13.7□□□□□ -0.22
HMGN1P05114 FHOD3-201ENST00000257209 4967 ntAPPRIS P3 TSL 1 (best) BASIC13.7□□□□□ -0.22
HMGN1P05114 MYADM-205ENST00000391771 3111 ntAPPRIS P1 TSL 2 BASIC13.7□□□□□ -0.22
HMGN1P05114 FHDC1-202ENST00000511601 6583 ntAPPRIS P1 TSL 5 BASIC13.7□□□□□ -0.22
HMGN1P05114 TM4SF19-201ENST00000273695 1022 ntAPPRIS P1 TSL 1 (best) BASIC13.7□□□□□ -0.22
HMGN1P05114 CYB561D1-202ENST00000369868 1085 ntTSL 2 BASIC13.7□□□□□ -0.22
HMGN1P05114 COA5-202ENST00000409997 557 ntTSL 4 BASIC13.7□□□□□ -0.22
HMGN1P05114 RAD18-204ENST00000418463 563 ntTSL 4 BASIC13.7□□□□□ -0.22
HMGN1P05114 APCDD1L-AS1-201ENST00000420279 555 ntTSL 5 BASIC13.7□□□□□ -0.22
HMGN1P05114 RAD18-205ENST00000421052 582 ntTSL 3 BASIC13.7□□□□□ -0.22
HMGN1P05114 IQSEC2-204ENST00000485377 835 ntTSL 1 (best) BASIC13.7□□□□□ -0.22
HMGN1P05114 SWI5-205ENST00000495313 466 ntAPPRIS ALT2 TSL 3 BASIC13.7□□□□□ -0.22
HMGN1P05114 STT3A-AS1-201ENST00000530526 429 ntTSL 3 BASIC13.7□□□□□ -0.22
Retrieved 100 of 98,524 protein–RNA pairs in 33.3 ms