Protein–RNA interactions for Protein: P04350

TUBB4A, Tubulin beta-4A chain, humanhuman

Predictions only

Length 444 aa.

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Protein RNA Prediction (catRAPID) Interaction (ENCODE eCLIP)
Gene UniProt Accession Transcript Symbol Ensembl Transcript ID Length Transcript Status Prediction Score Prediction z-Score p-Value Fold Change
TUBB4AP04350 AC254562.3-201ENST00000626627 631 ntTSL 5 BASIC16.19■□□□□ 0.18
TUBB4AP04350 COLCA2-206ENST00000638573 1080 ntAPPRIS ALT2 TSL 1 (best) BASIC16.19■□□□□ 0.18
TUBB4AP04350 THBS4-201ENST00000350881 3222 ntAPPRIS P3 TSL 1 (best) BASIC16.19■□□□□ 0.18
TUBB4AP04350 KCNH6-204ENST00000581784 3017 ntTSL 2 BASIC16.19■□□□□ 0.18
TUBB4AP04350 LINC01114-203ENST00000425879 2434 ntTSL 2 BASIC16.19■□□□□ 0.18
TUBB4AP04350 TUBGCP6-201ENST00000248846 5612 ntAPPRIS P1 TSL 1 (best) BASIC16.19■□□□□ 0.18
TUBB4AP04350 TATDN3-201ENST00000366973 2321 ntAPPRIS ALT1 TSL 1 (best) BASIC16.19■□□□□ 0.18
TUBB4AP04350 RSPO1-202ENST00000401068 2320 ntAPPRIS P1 TSL 1 (best) BASIC16.19■□□□□ 0.18
TUBB4AP04350 MOGAT3-201ENST00000223114 2132 ntAPPRIS P2 TSL 1 (best) BASIC16.19■□□□□ 0.18
TUBB4AP04350 UMODL1-206ENST00000408989 5262 ntAPPRIS P4 TSL 1 (best) BASIC16.19■□□□□ 0.18
TUBB4AP04350 MFAP3-201ENST00000322602 2891 ntAPPRIS P1 TSL 1 (best) BASIC16.19■□□□□ 0.18
TUBB4AP04350 PIKFYVE-202ENST00000308862 1640 ntTSL 1 (best) BASIC16.19■□□□□ 0.18
TUBB4AP04350 CRTC2-202ENST00000368630 1635 ntTSL 2 BASIC16.19■□□□□ 0.18
TUBB4AP04350 DEK-201ENST00000244776 1441 ntTSL 2 BASIC16.19■□□□□ 0.18
TUBB4AP04350 ATG10-202ENST00000355178 1438 ntTSL 2 BASIC16.19■□□□□ 0.18
TUBB4AP04350 POFUT1-202ENST00000375749 5235 ntAPPRIS P1 TSL 1 (best) BASIC16.19■□□□□ 0.18
TUBB4AP04350 BCAR1-209ENST00000546196 1340 ntBASIC16.19■□□□□ 0.18
TUBB4AP04350 TGM6-202ENST00000381423 2158 ntTSL 1 (best) BASIC16.19■□□□□ 0.18
TUBB4AP04350 SIMC1-205ENST00000443967 3572 ntAPPRIS ALT2 TSL 1 (best) BASIC16.18■□□□□ 0.18
TUBB4AP04350 ATRIP-204ENST00000412052 2721 ntTSL 1 (best) BASIC16.18■□□□□ 0.18
TUBB4AP04350 ATG9A-204ENST00000409422 2512 ntTSL 5 BASIC16.18■□□□□ 0.18
TUBB4AP04350 VSIR-201ENST00000394957 4689 ntAPPRIS P1 TSL 1 (best) BASIC16.18■□□□□ 0.18
TUBB4AP04350 ZNF561-AS1-204ENST00000587536 1799 ntTSL 2 BASIC16.18■□□□□ 0.18
TUBB4AP04350 BEND3P3-201ENST00000611030 2440 ntBASIC16.18■□□□□ 0.18
TUBB4AP04350 CLCN7-201ENST00000262318 3717 ntTSL 5 BASIC16.18■□□□□ 0.18
TUBB4AP04350 KIAA2026-201ENST00000381461 6884 ntTSL 5 BASIC16.18■□□□□ 0.18
TUBB4AP04350 BEND7-201ENST00000341083 2239 ntAPPRIS P3 TSL 2 BASIC16.18■□□□□ 0.18
TUBB4AP04350 UNC13A-202ENST00000519716 9838 ntAPPRIS P2 TSL 5 BASIC16.18■□□□□ 0.18
TUBB4AP04350 DNAJC7-201ENST00000316603 1468 ntTSL 1 (best) BASIC16.18■□□□□ 0.18
TUBB4AP04350 GPSM3-207ENST00000375043 1456 ntAPPRIS P1 TSL 1 (best) BASIC16.18■□□□□ 0.18
TUBB4AP04350 CLK3P2-201ENST00000427566 1453 ntBASIC16.18■□□□□ 0.18
TUBB4AP04350 AL669831.1-201ENST00000506640 6432 ntTSL 5 BASIC16.18■□□□□ 0.18
TUBB4AP04350 FKBP9-201ENST00000242209 3462 ntAPPRIS P1 TSL 1 (best) BASIC16.18■□□□□ 0.18
TUBB4AP04350 TM2D1-201ENST00000294613 1250 ntAPPRIS P1 TSL 1 (best) BASIC16.18■□□□□ 0.18
TUBB4AP04350 ART5-201ENST00000359918 1241 ntAPPRIS P1 TSL 1 (best) BASIC16.18■□□□□ 0.18
TUBB4AP04350 TM2D1-204ENST00000371180 1248 ntTSL 5 BASIC16.18■□□□□ 0.18
TUBB4AP04350 COPS7B-207ENST00000410024 1103 ntAPPRIS P1 TSL 2 BASIC16.18■□□□□ 0.18
TUBB4AP04350 AC096536.1-201ENST00000443284 440 ntTSL 2 BASIC16.18■□□□□ 0.18
TUBB4AP04350 AC009947.1-201ENST00000444350 727 ntBASIC16.18■□□□□ 0.18
TUBB4AP04350 AC007834.1-201ENST00000446473 728 ntTSL 3 BASIC16.18■□□□□ 0.18
TUBB4AP04350 SMN1-203ENST00000503079 1219 ntTSL 5 BASIC16.18■□□□□ 0.18
TUBB4AP04350 LINC01184-209ENST00000514573 609 ntTSL 3 BASIC16.18■□□□□ 0.18
TUBB4AP04350 RPL8-207ENST00000528957 1015 ntAPPRIS P1 TSL 1 (best) BASIC16.18■□□□□ 0.18
TUBB4AP04350 RAB30-AS1-207ENST00000533708 825 ntTSL 2 BASIC16.18■□□□□ 0.18
TUBB4AP04350 CSRP2-202ENST00000546966 754 ntAPPRIS P1 TSL 3 BASIC16.18■□□□□ 0.18
TUBB4AP04350 AP002472.1-201ENST00000577490 586 ntBASIC16.18■□□□□ 0.18
TUBB4AP04350 OR5AH1P-202ENST00000597822 431 ntTSL 3 BASIC16.18■□□□□ 0.18
TUBB4AP04350 TM2D1-212ENST00000606498 969 ntAPPRIS P1 TSL 5 BASIC16.18■□□□□ 0.18
TUBB4AP04350 AC099522.2-201ENST00000607001 744 ntBASIC16.18■□□□□ 0.18
TUBB4AP04350 CCDC6-201ENST00000263102 5811 ntAPPRIS P1 TSL 1 (best) BASIC16.18■□□□□ 0.18
TUBB4AP04350 TRAFD1-201ENST00000257604 3178 ntAPPRIS P2 TSL 2 BASIC16.18■□□□□ 0.18
TUBB4AP04350 L3MBTL1-206ENST00000427442 3157 ntAPPRIS ALT2 TSL 5 BASIC16.18■□□□□ 0.18
TUBB4AP04350 CNOT9-201ENST00000273064 4079 ntAPPRIS P1 TSL 1 (best) BASIC16.18■□□□□ 0.18
TUBB4AP04350 PDE8A-201ENST00000310298 3984 ntAPPRIS P4 TSL 1 (best) BASIC16.18■□□□□ 0.18
TUBB4AP04350 MGRN1-202ENST00000399577 6425 ntAPPRIS ALT2 TSL 1 (best) BASIC16.18■□□□□ 0.18
TUBB4AP04350 PLA2G3-201ENST00000215885 2697 ntAPPRIS P1 TSL 1 (best) BASIC16.18■□□□□ 0.18
TUBB4AP04350 DUSP28-202ENST00000405954 3461 ntAPPRIS P1 TSL 1 (best) BASIC16.18■□□□□ 0.18
TUBB4AP04350 OGFOD3-201ENST00000313056 4287 ntAPPRIS P1 TSL 2 BASIC16.18■□□□□ 0.18
TUBB4AP04350 CATSPERE-201ENST00000366531 3038 ntAPPRIS ALT2 TSL 2 BASIC16.18■□□□□ 0.18
TUBB4AP04350 DACH1-204ENST00000620444 4627 ntAPPRIS ALT2 TSL 5 BASIC16.18■□□□□ 0.18
TUBB4AP04350 PAM-201ENST00000304400 3156 ntAPPRIS P3 TSL 1 (best) BASIC16.18■□□□□ 0.18
TUBB4AP04350 MAGEA2-202ENST00000598543 1662 ntAPPRIS P1 TSL 1 (best) BASIC16.18■□□□□ 0.18
TUBB4AP04350 LMNA-213ENST00000473598 2015 ntTSL 2 BASIC16.18■□□□□ 0.18
TUBB4AP04350 CHPF2-204ENST00000495645 2709 ntTSL 2 BASIC16.18■□□□□ 0.18
TUBB4AP04350 APBB1-201ENST00000299402 2636 ntAPPRIS P3 TSL 5 BASIC16.17■□□□□ 0.18
TUBB4AP04350 C11orf21-201ENST00000381153 2956 ntAPPRIS ALT2 TSL 1 (best) BASIC16.17■□□□□ 0.18
TUBB4AP04350 PCDHGA11-201ENST00000398587 4647 ntAPPRIS P3 TSL 1 (best) BASIC16.17■□□□□ 0.18
TUBB4AP04350 DAGLB-201ENST00000297056 2897 ntAPPRIS P1 TSL 1 (best) BASIC16.17■□□□□ 0.18
TUBB4AP04350 H6PD-203ENST00000602477 5590 ntTSL 1 (best) BASIC16.17■□□□□ 0.18
TUBB4AP04350 AC215219.1-201ENST00000400706 1817 ntBASIC16.17■□□□□ 0.18
TUBB4AP04350 DDC-213ENST00000617822 1809 ntTSL 3 BASIC16.17■□□□□ 0.18
TUBB4AP04350 APOB-202ENST00000399256 3128 ntTSL 1 (best) BASIC16.17■□□□□ 0.18
TUBB4AP04350 BORCS8-203ENST00000477565 1489 ntAPPRIS ALT1 TSL 1 (best) BASIC16.17■□□□□ 0.18
TUBB4AP04350 DNAJC22-202ENST00000549441 4412 ntAPPRIS P1 TSL 2 BASIC16.17■□□□□ 0.18
TUBB4AP04350 MKS1-201ENST00000313863 2091 ntTSL 5 BASIC16.17■□□□□ 0.18
TUBB4AP04350 AC005324.3-201ENST00000455584 5514 ntAPPRIS P1 TSL 2 BASIC16.17■□□□□ 0.18
TUBB4AP04350 SEPT6-201ENST00000343984 2693 ntTSL 1 (best) BASIC16.17■□□□□ 0.18
TUBB4AP04350 MAGEA1-201ENST00000356661 1710 ntAPPRIS P1 TSL 1 (best) BASIC16.17■□□□□ 0.18
TUBB4AP04350 GHRLOS-201ENST00000439539 1708 ntTSL 1 (best) BASIC16.17■□□□□ 0.18
TUBB4AP04350 NPR1-202ENST00000368680 4236 ntAPPRIS P1 TSL 1 (best) BASIC16.17■□□□□ 0.18
TUBB4AP04350 KIF3A-201ENST00000378735 3266 ntAPPRIS ALT1 TSL 1 (best) BASIC16.17■□□□□ 0.18
TUBB4AP04350 WASH3P-204ENST00000558784 1644 ntTSL 5 BASIC16.17■□□□□ 0.18
TUBB4AP04350 CXCL12-201ENST00000343575 1857 ntAPPRIS P3 TSL 1 (best) BASIC16.17■□□□□ 0.18
TUBB4AP04350 ANKRD36BP2-202ENST00000421951 1899 ntTSL 3 BASIC16.17■□□□□ 0.18
TUBB4AP04350 CELA2A-201ENST00000359621 919 ntAPPRIS P1 TSL 1 (best) BASIC16.17■□□□□ 0.18
TUBB4AP04350 Metazoa_SRP.28-201ENST00000366402 260 ntBASIC16.17■□□□□ 0.18
TUBB4AP04350 RPP38-203ENST00000378202 1030 ntAPPRIS P1 TSL 1 (best) BASIC16.17■□□□□ 0.18
TUBB4AP04350 SDR39U1-212ENST00000555365 976 ntTSL 3 BASIC16.17■□□□□ 0.18
TUBB4AP04350 KRT19P2-202ENST00000557173 1012 ntBASIC16.17■□□□□ 0.18
TUBB4AP04350 MAP1LC3B-207ENST00000565788 625 ntTSL 2 BASIC16.17■□□□□ 0.18
TUBB4AP04350 YPEL3-209ENST00000566595 796 ntAPPRIS P1 TSL 2 BASIC16.17■□□□□ 0.18
TUBB4AP04350 NDRG4-247ENST00000568640 1281 ntTSL 2 BASIC16.17■□□□□ 0.18
TUBB4AP04350 CDC42EP4-206ENST00000581014 737 ntTSL 5 BASIC16.17■□□□□ 0.18
TUBB4AP04350 AC010503.1-201ENST00000596027 520 ntTSL 5 BASIC16.17■□□□□ 0.18
TUBB4AP04350 AC004834.1-204ENST00000640670 1055 ntTSL 5 BASIC16.17■□□□□ 0.18
TUBB4AP04350 CPEB2-209ENST00000538197 6878 ntAPPRIS P4 TSL 5 BASIC16.17■□□□□ 0.18
TUBB4AP04350 MKNK1-203ENST00000371945 2618 ntAPPRIS ALT2 TSL 1 (best) BASIC16.17■□□□□ 0.18
TUBB4AP04350 NR4A2-209ENST00000426264 2642 ntTSL 1 (best) BASIC16.17■□□□□ 0.18
TUBB4AP04350 POM121-201ENST00000358357 5320 ntAPPRIS P3 TSL 1 (best) BASIC16.17■□□□□ 0.18
TUBB4AP04350 SNHG18-201ENST00000508179 1799 ntTSL 2 BASIC16.17■□□□□ 0.18
Retrieved 100 of 98,524 protein–RNA pairs in 36.1 ms