Protein–RNA interactions for Protein: O15439

ABCC4, Multidrug resistance-associated protein 4, humanhuman

Predictions only

Length 1,325 aa.

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Protein RNA Prediction (catRAPID) Interaction (ENCODE eCLIP)
Gene UniProt Accession Transcript Symbol Ensembl Transcript ID Length Transcript Status Prediction Score Prediction z-Score p-Value Fold Change
ABCC4O15439 CDC42EP4-202ENST00000439510 2879 ntTSL 2 BASIC19.02■□□□□ 0.63
ABCC4O15439 PNMA1-201ENST00000316836 2590 ntAPPRIS P1 BASIC19.02■□□□□ 0.63
ABCC4O15439 CSNK1A1-202ENST00000377843 2559 ntAPPRIS ALT1 TSL 1 (best) BASIC19.02■□□□□ 0.63
ABCC4O15439 KNSTRN-202ENST00000416151 1899 ntTSL 3 BASIC19.02■□□□□ 0.63
ABCC4O15439 INE2-201ENST00000630399 1874 ntBASIC19.02■□□□□ 0.63
ABCC4O15439 CRISPLD2-203ENST00000564567 1651 ntTSL 1 (best) BASIC19.01■□□□□ 0.63
ABCC4O15439 DYRK1A-203ENST00000398956 1590 ntTSL 1 (best) BASIC19.01■□□□□ 0.63
ABCC4O15439 TANGO2-205ENST00000401886 1559 ntTSL 5 BASIC19.01■□□□□ 0.63
ABCC4O15439 ARHGAP26-201ENST00000274498 6862 ntAPPRIS P3 TSL 1 (best) BASIC19.01■□□□□ 0.63
ABCC4O15439 AL138767.1-201ENST00000354527 744 ntTSL 3 BASIC19.01■□□□□ 0.63
ABCC4O15439 AC244250.1-201ENST00000438185 451 ntTSL 2 BASIC19.01■□□□□ 0.63
ABCC4O15439 REEP1-202ENST00000453231 940 ntTSL 2 BASIC19.01■□□□□ 0.63
ABCC4O15439 ADM-202ENST00000524948 584 ntTSL 2 BASIC19.01■□□□□ 0.63
ABCC4O15439 AC104241.2-201ENST00000532748 789 ntTSL 3 BASIC19.01■□□□□ 0.63
ABCC4O15439 MAP1LC3B2-202ENST00000556529 660 ntAPPRIS P1 TSL 3 BASIC19.01■□□□□ 0.63
ABCC4O15439 AC136428.1-201ENST00000569103 349 ntAPPRIS P1 TSL 5 BASIC19.01■□□□□ 0.63
ABCC4O15439 AC106872.11-201ENST00000605838 421 ntBASIC19.01■□□□□ 0.63
ABCC4O15439 LINC00854-216ENST00000636331 718 ntAPPRIS P5 TSL 5 BASIC19.01■□□□□ 0.63
ABCC4O15439 GLT1D1-201ENST00000281703 2725 ntTSL 2 BASIC19.01■□□□□ 0.63
ABCC4O15439 GLIPR1L2-204ENST00000550916 2609 ntAPPRIS ALT2 TSL 1 (best) BASIC19.01■□□□□ 0.63
ABCC4O15439 SLC35C2-204ENST00000372230 2246 ntAPPRIS P1 TSL 1 (best) BASIC19.01■□□□□ 0.63
ABCC4O15439 TUBA8-202ENST00000330423 2018 ntAPPRIS P1 TSL 1 (best) BASIC19.01■□□□□ 0.63
ABCC4O15439 ATG5-201ENST00000343245 3092 ntAPPRIS P1 TSL 1 (best) BASIC19.01■□□□□ 0.63
ABCC4O15439 PRF1-201ENST00000373209 2492 ntAPPRIS P1 TSL 1 (best) BASIC19.01■□□□□ 0.63
ABCC4O15439 AC232323.1-201ENST00000540724 2099 ntBASIC19.01■□□□□ 0.63
ABCC4O15439 SNX11-202ENST00000393405 2733 ntAPPRIS P1 TSL 2 BASIC19.01■□□□□ 0.63
ABCC4O15439 BRD2-201ENST00000374825 4894 ntAPPRIS P3 TSL 1 (best) BASIC19.01■□□□□ 0.63
ABCC4O15439 TEN1-CDK3-202ENST00000569284 3287 ntAPPRIS P1 TSL 2 BASIC19.01■□□□□ 0.63
ABCC4O15439 SCLY-202ENST00000409736 1774 ntTSL 1 (best) BASIC19.01■□□□□ 0.63
ABCC4O15439 PMM2-201ENST00000268261 2313 ntAPPRIS P1 TSL 1 (best) BASIC19.01■□□□□ 0.63
ABCC4O15439 SHE-201ENST00000304760 6243 ntAPPRIS P1 TSL 1 (best) BASIC19.01■□□□□ 0.63
ABCC4O15439 LINC02495-201ENST00000508601 4167 ntTSL 2 BASIC19.01■□□□□ 0.63
ABCC4O15439 TNFRSF14-AS1-201ENST00000416860 3522 ntTSL 2 BASIC19.01■□□□□ 0.63
ABCC4O15439 TAS1R1-201ENST00000333172 2892 ntAPPRIS P1 TSL 1 (best) BASIC19.01■□□□□ 0.63
ABCC4O15439 VWA2-202ENST00000392982 2794 ntAPPRIS P1 TSL 1 (best) BASIC19.01■□□□□ 0.63
ABCC4O15439 FKBP5-201ENST00000357266 3772 ntAPPRIS P1 TSL 1 (best) BASIC19.01■□□□□ 0.63
ABCC4O15439 AC007292.2-201ENST00000593524 1812 ntBASIC19.01■□□□□ 0.63
ABCC4O15439 PAX4-201ENST00000338516 1085 ntAPPRIS ALT2 TSL 5 BASIC19■□□□□ 0.63
ABCC4O15439 ANAPC11-202ENST00000357385 881 ntTSL 1 (best) BASIC19■□□□□ 0.63
ABCC4O15439 TISP43-201ENST00000409793 538 ntTSL 4 BASIC19■□□□□ 0.63
ABCC4O15439 TMEM107-203ENST00000431792 455 ntTSL 3 BASIC19■□□□□ 0.63
ABCC4O15439 PTPA-218ENST00000435132 618 ntTSL 2 BASIC19■□□□□ 0.63
ABCC4O15439 ZSCAN32-210ENST00000573830 668 ntTSL 3 BASIC19■□□□□ 0.63
ABCC4O15439 AC004637.1-201ENST00000586675 482 ntTSL 3 BASIC19■□□□□ 0.63
ABCC4O15439 AC092634.5-202ENST00000587736 928 ntTSL 2 BASIC19■□□□□ 0.63
ABCC4O15439 AL451050.2-201ENST00000606967 682 ntBASIC19■□□□□ 0.63
ABCC4O15439 AL358215.2-201ENST00000639693 946 ntTSL 5 BASIC19■□□□□ 0.63
ABCC4O15439 LINC01285-201ENST00000412422 2289 ntTSL 2 BASIC19■□□□□ 0.63
ABCC4O15439 KRT20-201ENST00000167588 1737 ntAPPRIS P1 TSL 1 (best) BASIC19■□□□□ 0.63
ABCC4O15439 MAGEA2-204ENST00000611674 1728 ntAPPRIS P1 TSL 2 BASIC19■□□□□ 0.63
ABCC4O15439 PICALM-204ENST00000526033 3613 ntAPPRIS ALT1 TSL 1 (best) BASIC19■□□□□ 0.63
ABCC4O15439 PLIN1-201ENST00000300055 2953 ntAPPRIS P1 TSL 1 (best) BASIC19■□□□□ 0.63
ABCC4O15439 LIMK2-204ENST00000406516 2657 ntTSL 5 BASIC19■□□□□ 0.63
ABCC4O15439 LINGO1-204ENST00000561030 2677 ntTSL 1 (best) BASIC19■□□□□ 0.63
ABCC4O15439 AAMP-202ENST00000420660 1761 ntTSL 2 BASIC19■□□□□ 0.63
ABCC4O15439 CCNA1-204ENST00000630422 1751 ntAPPRIS P1 TSL 2 BASIC19■□□□□ 0.63
ABCC4O15439 SBNO2-202ENST00000438103 4537 ntAPPRIS ALT2 TSL 2 BASIC19■□□□□ 0.63
ABCC4O15439 MKS1-202ENST00000393119 2397 ntAPPRIS P1 TSL 1 (best) BASIC19■□□□□ 0.63
ABCC4O15439 STBD1-201ENST00000237642 3420 ntAPPRIS P1 TSL 1 (best) BASIC19■□□□□ 0.63
ABCC4O15439 GPANK1-203ENST00000375896 1910 ntAPPRIS P1 TSL 1 (best) BASIC19■□□□□ 0.63
ABCC4O15439 ABHD16A-202ENST00000440843 1906 ntTSL 2 BASIC19■□□□□ 0.63
ABCC4O15439 CROCCP1-201ENST00000426910 5675 ntBASIC19■□□□□ 0.63
ABCC4O15439 TMEM230-201ENST00000202834 1472 ntAPPRIS P1 TSL 1 (best) BASIC19■□□□□ 0.63
ABCC4O15439 MSTO1-201ENST00000245564 2431 ntAPPRIS P1 TSL 1 (best) BASIC19■□□□□ 0.63
ABCC4O15439 TBCD-202ENST00000539345 3975 ntTSL 5 BASIC19■□□□□ 0.63
ABCC4O15439 HOGA1-203ENST00000370647 1999 ntTSL 1 (best) BASIC19■□□□□ 0.63
ABCC4O15439 DACH1-202ENST00000613252 5233 ntAPPRIS P2 TSL 1 (best) BASIC19■□□□□ 0.63
ABCC4O15439 CDC37-201ENST00000222005 1608 ntAPPRIS P1 TSL 1 (best) BASIC19■□□□□ 0.63
ABCC4O15439 AP3D1-202ENST00000355272 5034 ntAPPRIS ALT2 TSL 1 (best) BASIC19■□□□□ 0.63
ABCC4O15439 C11orf52-201ENST00000278601 1141 ntAPPRIS P1 TSL 1 (best) BASIC19■□□□□ 0.63
ABCC4O15439 BATF-201ENST00000286639 980 ntAPPRIS P1 TSL 1 (best) BASIC19■□□□□ 0.63
ABCC4O15439 KNCN-202ENST00000396314 608 ntAPPRIS P3 TSL 4 BASIC19■□□□□ 0.63
ABCC4O15439 AC092506.1-202ENST00000401022 528 ntBASIC19■□□□□ 0.63
ABCC4O15439 LIMS4-201ENST00000413601 1215 ntTSL 1 (best) BASIC19■□□□□ 0.63
ABCC4O15439 POM121L10P-201ENST00000436994 1285 ntBASIC19■□□□□ 0.63
ABCC4O15439 RNF41-210ENST00000552244 716 ntTSL 3 BASIC19■□□□□ 0.63
ABCC4O15439 AC025810.1-201ENST00000569986 981 ntTSL 1 (best) BASIC19■□□□□ 0.63
ABCC4O15439 AC008750.3-201ENST00000601148 437 ntTSL 5 BASIC19■□□□□ 0.63
ABCC4O15439 NCOA6-206ENST00000612493 4082 ntAPPRIS ALT2 TSL 5 BASIC18.99■□□□□ 0.63
ABCC4O15439 RPA3-201ENST00000223129 2020 ntAPPRIS P1 TSL 1 (best) BASIC18.99■□□□□ 0.63
ABCC4O15439 FBXL19-204ENST00000471231 3641 ntTSL 2 BASIC18.99■□□□□ 0.63
ABCC4O15439 BCAR1-207ENST00000538440 3192 ntAPPRIS ALT2 TSL 2 BASIC18.99■□□□□ 0.63
ABCC4O15439 MGEA5-203ENST00000370094 3314 ntTSL 1 (best) BASIC18.99■□□□□ 0.63
ABCC4O15439 PIP5K1C-202ENST00000537021 3326 ntAPPRIS ALT2 TSL 1 (best) BASIC18.99■□□□□ 0.63
ABCC4O15439 WDR45-224ENST00000485908 1301 ntTSL 5 BASIC18.99■□□□□ 0.63
ABCC4O15439 ARHGEF16-201ENST00000378371 2219 ntTSL 1 (best) BASIC18.99■□□□□ 0.63
ABCC4O15439 ANO1-201ENST00000316296 2118 ntTSL 2 BASIC18.99■□□□□ 0.63
ABCC4O15439 CALD1-206ENST00000424922 2124 ntTSL 1 (best) BASIC18.99■□□□□ 0.63
ABCC4O15439 JKAMP-207ENST00000554271 2137 ntTSL 2 BASIC18.99■□□□□ 0.63
ABCC4O15439 MARCH1-203ENST00000503008 5877 ntAPPRIS P1 TSL 1 (best) BASIC18.99■□□□□ 0.63
ABCC4O15439 CBX3-202ENST00000396386 1857 ntAPPRIS P1 TSL 1 (best) BASIC18.99■□□□□ 0.63
ABCC4O15439 NKPD1-201ENST00000317951 4233 ntAPPRIS P1 TSL 2 BASIC18.99■□□□□ 0.63
ABCC4O15439 SFXN1-201ENST00000321442 4231 ntAPPRIS P1 TSL 1 (best) BASIC18.99■□□□□ 0.63
ABCC4O15439 MED16-203ENST00000325464 2922 ntAPPRIS P2 TSL 5 BASIC18.99■□□□□ 0.63
ABCC4O15439 SLC35A3-221ENST00000640600 3341 ntTSL 5 BASIC18.99■□□□□ 0.63
ABCC4O15439 LYSMD4-204ENST00000409796 2672 ntAPPRIS P1 TSL 1 (best) BASIC18.99■□□□□ 0.63
ABCC4O15439 CTDSP2-201ENST00000398073 4795 ntAPPRIS P1 TSL 1 (best) BASIC18.99■□□□□ 0.63
ABCC4O15439 CACNA1B-203ENST00000371355 9647 ntAPPRIS ALT2 TSL 5 BASIC18.99■□□□□ 0.63
ABCC4O15439 KCNH3-201ENST00000257981 3867 ntAPPRIS P1 TSL 1 (best) BASIC18.99■□□□□ 0.63
ABCC4O15439 TPM3-205ENST00000328159 1771 ntTSL 2 BASIC18.99■□□□□ 0.63
Retrieved 100 of 98,524 protein–RNA pairs in 54.3 ms