Protein–RNA interactions for Protein: Q9UBN7

HDAC6, Histone deacetylase 6, humanhuman

Predictions only

Length 1,215 aa.

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Protein RNA Prediction (catRAPID) Interaction (ENCODE eCLIP)
Gene UniProt Accession Transcript Symbol Ensembl Transcript ID Length Transcript Status Prediction Score Prediction z-Score p-Value Fold Change
HDAC6Q9UBN7 RPSAP36-202ENST00000494591 1261 ntBASIC17.07■□□□□ 0.32
HDAC6Q9UBN7 RPN1-207ENST00000497289 2137 ntTSL 2 BASIC17.07■□□□□ 0.32
HDAC6Q9UBN7 IL32-218ENST00000530890 774 ntAPPRIS ALT2 TSL 2 BASIC17.07■□□□□ 0.32
HDAC6Q9UBN7 AKIP1-210ENST00000534147 1022 ntAPPRIS P3 TSL 1 (best) BASIC17.07■□□□□ 0.32
HDAC6Q9UBN7 IGHV3OR16-9-202ENST00000558425 288 ntAPPRIS ALT2 BASIC17.07■□□□□ 0.32
HDAC6Q9UBN7 RN7SL48P-201ENST00000579283 293 ntBASIC17.07■□□□□ 0.32
HDAC6Q9UBN7 AL358473.2-201ENST00000610411 556 ntTSL 4 BASIC17.07■□□□□ 0.32
HDAC6Q9UBN7 WDR45-230ENST00000634559 1192 ntTSL 5 BASIC17.07■□□□□ 0.32
HDAC6Q9UBN7 LINC00592-202ENST00000640420 768 ntTSL 5 BASIC17.07■□□□□ 0.32
HDAC6Q9UBN7 LINC00116-201ENST00000414416 2051 ntAPPRIS P5 TSL 1 (best) BASIC17.07■□□□□ 0.32
HDAC6Q9UBN7 CPSF1-213ENST00000620219 4462 ntAPPRIS P1 TSL 1 (best) BASIC17.07■□□□□ 0.32
HDAC6Q9UBN7 DCUN1D4-203ENST00000451288 4269 ntTSL 2 BASIC17.07■□□□□ 0.32
HDAC6Q9UBN7 BTBD11-204ENST00000420571 3478 ntTSL 5 BASIC17.07■□□□□ 0.32
HDAC6Q9UBN7 HPCAL1-202ENST00000381765 1904 ntAPPRIS P1 TSL 2 BASIC17.07■□□□□ 0.32
HDAC6Q9UBN7 C6orf120-201ENST00000332290 2667 ntAPPRIS P1 BASIC17.07■□□□□ 0.32
HDAC6Q9UBN7 KCNQ4-201ENST00000347132 4099 ntAPPRIS P2 TSL 1 (best) BASIC17.07■□□□□ 0.32
HDAC6Q9UBN7 CEP70-213ENST00000489254 1811 ntAPPRIS ALT2 TSL 2 BASIC17.07■□□□□ 0.32
HDAC6Q9UBN7 PTGES3L-AARSD1-201ENST00000360221 1790 ntTSL 2 BASIC17.07■□□□□ 0.32
HDAC6Q9UBN7 AC139749.1-202ENST00000617529 3139 ntBASIC17.07■□□□□ 0.32
HDAC6Q9UBN7 NIPAL3-204ENST00000374399 1711 ntAPPRIS P1 TSL 1 (best) BASIC17.07■□□□□ 0.32
HDAC6Q9UBN7 PARN-202ENST00000420015 2360 ntTSL 2 BASIC17.07■□□□□ 0.32
HDAC6Q9UBN7 CREB3L2-204ENST00000456390 2360 ntTSL 2 BASIC17.07■□□□□ 0.32
HDAC6Q9UBN7 ZNF18-201ENST00000322748 2767 ntAPPRIS P3 TSL 2 BASIC17.06■□□□□ 0.32
HDAC6Q9UBN7 SALL3-205ENST00000575389 3996 ntTSL 5 BASIC17.06■□□□□ 0.32
HDAC6Q9UBN7 NDRG2-202ENST00000298687 2122 ntAPPRIS P4 TSL 1 (best) BASIC17.06■□□□□ 0.32
HDAC6Q9UBN7 HYAL2-201ENST00000357750 2055 ntAPPRIS P1 TSL 1 (best) BASIC17.06■□□□□ 0.32
HDAC6Q9UBN7 HDAC5-202ENST00000336057 5040 ntTSL 1 (best) BASIC17.06■□□□□ 0.32
HDAC6Q9UBN7 IPPK-201ENST00000287996 4401 ntAPPRIS P1 TSL 1 (best) BASIC17.06■□□□□ 0.32
HDAC6Q9UBN7 PKIG-204ENST00000372889 1489 ntAPPRIS P1 TSL 5 BASIC17.06■□□□□ 0.32
HDAC6Q9UBN7 FMNL1-206ENST00000587489 2487 ntTSL 1 (best) BASIC17.06■□□□□ 0.32
HDAC6Q9UBN7 NFIC-211ENST00000641145 8399 ntBASIC17.06■□□□□ 0.32
HDAC6Q9UBN7 MXD1-201ENST00000264444 5587 ntAPPRIS P1 TSL 1 (best) BASIC17.06■□□□□ 0.32
HDAC6Q9UBN7 ODF2-202ENST00000372791 2375 ntAPPRIS P3 TSL 1 (best) BASIC17.06■□□□□ 0.32
HDAC6Q9UBN7 RXRA-202ENST00000481739 1846 ntAPPRIS P1 TSL 1 (best) BASIC17.06■□□□□ 0.32
HDAC6Q9UBN7 TOM1-209ENST00000447733 2317 ntTSL 2 BASIC17.06■□□□□ 0.32
HDAC6Q9UBN7 DLX6-202ENST00000518156 2304 ntAPPRIS P2 TSL 1 (best) BASIC17.06■□□□□ 0.32
HDAC6Q9UBN7 C22orf34-201ENST00000343999 2816 ntTSL 2 BASIC17.06■□□□□ 0.32
HDAC6Q9UBN7 CRYAA-202ENST00000398132 826 ntTSL 2 BASIC17.06■□□□□ 0.32
HDAC6Q9UBN7 EPDR1-203ENST00000425345 947 ntAPPRIS ALT2 TSL 1 (best) BASIC17.06■□□□□ 0.32
HDAC6Q9UBN7 MTX1P1-201ENST00000440904 838 ntBASIC17.06■□□□□ 0.32
HDAC6Q9UBN7 RPL27A-202ENST00000524496 558 ntTSL 3 BASIC17.06■□□□□ 0.32
HDAC6Q9UBN7 AL133523.1-201ENST00000554537 331 ntTSL 3 BASIC17.06■□□□□ 0.32
HDAC6Q9UBN7 AP005329.1-201ENST00000578800 1035 ntTSL 2 BASIC17.06■□□□□ 0.32
HDAC6Q9UBN7 THAP4-206ENST00000612200 969 ntTSL 1 (best) BASIC17.06■□□□□ 0.32
HDAC6Q9UBN7 FP236240.1-204ENST00000624932 712 ntTSL 2 BASIC17.06■□□□□ 0.32
HDAC6Q9UBN7 SHTN1-201ENST00000260777 5308 ntAPPRIS ALT2 TSL 2 BASIC17.06■□□□□ 0.32
HDAC6Q9UBN7 RNF167-211ENST00000575111 1757 ntAPPRIS P3 TSL 1 (best) BASIC17.06■□□□□ 0.32
HDAC6Q9UBN7 CECR7-202ENST00000441006 2726 ntTSL 1 (best) BASIC17.06■□□□□ 0.32
HDAC6Q9UBN7 CAMK2D-211ENST00000511664 2210 ntTSL 2 BASIC17.06■□□□□ 0.32
HDAC6Q9UBN7 EIF2B3-201ENST00000360403 1659 ntAPPRIS P1 TSL 1 (best) BASIC17.06■□□□□ 0.32
HDAC6Q9UBN7 MARS-233ENST00000628866 2583 ntTSL 5 BASIC17.06■□□□□ 0.32
HDAC6Q9UBN7 HLA-DQB1-205ENST00000434651 1642 ntAPPRIS P1 BASIC17.06■□□□□ 0.32
HDAC6Q9UBN7 AGAP7P-201ENST00000582299 2062 ntBASIC17.06■□□□□ 0.32
HDAC6Q9UBN7 AGAP14-201ENST00000624701 2060 ntBASIC17.06■□□□□ 0.32
HDAC6Q9UBN7 XK-201ENST00000378616 5206 ntAPPRIS P1 TSL 1 (best) BASIC17.06■□□□□ 0.32
HDAC6Q9UBN7 GALNTL6-205ENST00000511251 2905 ntTSL 1 (best) BASIC17.06■□□□□ 0.32
HDAC6Q9UBN7 AC004834.1-201ENST00000640784 2412 ntTSL 3 BASIC17.06■□□□□ 0.32
HDAC6Q9UBN7 TMA16-201ENST00000358572 1978 ntAPPRIS P1 TSL 1 (best) BASIC17.06■□□□□ 0.32
HDAC6Q9UBN7 AL354989.2-201ENST00000435838 1540 ntBASIC17.06■□□□□ 0.32
HDAC6Q9UBN7 AC015818.8-201ENST00000587907 1519 ntBASIC17.06■□□□□ 0.32
HDAC6Q9UBN7 DNAJC16-201ENST00000375838 2357 ntTSL 5 BASIC17.06■□□□□ 0.32
HDAC6Q9UBN7 CALR-201ENST00000316448 1903 ntAPPRIS P1 TSL 1 (best) BASIC17.06■□□□□ 0.32
HDAC6Q9UBN7 WRAP53-202ENST00000396463 1905 ntAPPRIS P1 TSL 1 (best) BASIC17.06■□□□□ 0.32
HDAC6Q9UBN7 AL359258.3-201ENST00000622910 2331 ntBASIC17.05■□□□□ 0.32
HDAC6Q9UBN7 SPATA20-201ENST00000006658 2719 ntTSL 1 (best) BASIC17.05■□□□□ 0.32
HDAC6Q9UBN7 GDAP1L1-201ENST00000342560 2265 ntAPPRIS P1 TSL 1 (best) BASIC17.05■□□□□ 0.32
HDAC6Q9UBN7 CTSA-202ENST00000354880 1820 ntTSL 2 BASIC17.05■□□□□ 0.32
HDAC6Q9UBN7 CYB561A3-203ENST00000447532 1803 ntTSL 5 BASIC17.05■□□□□ 0.32
HDAC6Q9UBN7 NFE2-203ENST00000540264 1833 ntAPPRIS P1 TSL 1 (best) BASIC17.05■□□□□ 0.32
HDAC6Q9UBN7 LINC00528-201ENST00000600723 2160 ntBASIC17.05■□□□□ 0.32
HDAC6Q9UBN7 PACSIN2-204ENST00000403744 2110 ntAPPRIS P1 TSL 1 (best) BASIC17.05■□□□□ 0.32
HDAC6Q9UBN7 MFSD13A-201ENST00000238936 2852 ntAPPRIS P1 TSL 5 BASIC17.05■□□□□ 0.32
HDAC6Q9UBN7 INPP5B-204ENST00000373026 3230 ntAPPRIS ALT2 TSL 5 BASIC17.05■□□□□ 0.32
HDAC6Q9UBN7 SPIN2A-201ENST00000374906 1319 ntAPPRIS P1 TSL 1 (best) BASIC17.05■□□□□ 0.32
HDAC6Q9UBN7 MARCKS-201ENST00000612661 4275 ntAPPRIS P1 TSL 1 (best) BASIC17.05■□□□□ 0.32
HDAC6Q9UBN7 CSH1-201ENST00000316193 900 ntAPPRIS P1 TSL 1 (best) BASIC17.05■□□□□ 0.32
HDAC6Q9UBN7 NOSIP-201ENST00000339093 1000 ntAPPRIS ALT1 TSL 5 BASIC17.05■□□□□ 0.32
HDAC6Q9UBN7 SMIM11A-203ENST00000399299 1033 ntTSL 1 (best) BASIC17.05■□□□□ 0.32
HDAC6Q9UBN7 VAMP1-203ENST00000400911 1068 ntTSL 1 (best) BASIC17.05■□□□□ 0.32
HDAC6Q9UBN7 AC053503.1-201ENST00000429882 519 ntTSL 3 BASIC17.05■□□□□ 0.32
HDAC6Q9UBN7 H2AFV-206ENST00000437072 589 ntTSL 4 BASIC17.05■□□□□ 0.32
HDAC6Q9UBN7 OARD1-212ENST00000482515 832 ntTSL 2 BASIC17.05■□□□□ 0.32
HDAC6Q9UBN7 COX14-203ENST00000550487 739 ntAPPRIS P1 TSL 1 (best) BASIC17.05■□□□□ 0.32
HDAC6Q9UBN7 SDR39U1-212ENST00000555365 976 ntTSL 3 BASIC17.05■□□□□ 0.32
HDAC6Q9UBN7 AC026495.1-203ENST00000557528 906 ntTSL 5 BASIC17.05■□□□□ 0.32
HDAC6Q9UBN7 CYBA-208ENST00000567174 1085 ntTSL 2 BASIC17.05■□□□□ 0.32
HDAC6Q9UBN7 AC011447.3-204ENST00000585498 883 ntTSL 2 BASIC17.05■□□□□ 0.32
HDAC6Q9UBN7 EEF1DP1-201ENST00000585891 896 ntBASIC17.05■□□□□ 0.32
HDAC6Q9UBN7 CYGB-203ENST00000589145 788 ntTSL 3 BASIC17.05■□□□□ 0.32
HDAC6Q9UBN7 AC008403.1-201ENST00000595676 443 ntAPPRIS P1 TSL 2 BASIC17.05■□□□□ 0.32
HDAC6Q9UBN7 KATNBL1-201ENST00000256544 2723 ntAPPRIS P1 TSL 1 (best) BASIC17.05■□□□□ 0.32
HDAC6Q9UBN7 RPS9-205ENST00000402367 1617 ntTSL 3 BASIC17.05■□□□□ 0.32
HDAC6Q9UBN7 RHD-206ENST00000423810 1637 ntTSL 1 (best) BASIC17.05■□□□□ 0.32
HDAC6Q9UBN7 THOC5-203ENST00000397872 2676 ntAPPRIS P1 TSL 5 BASIC17.05■□□□□ 0.32
HDAC6Q9UBN7 MCM3AP-AS1-203ENST00000421927 2280 ntTSL 2 BASIC17.05■□□□□ 0.32
HDAC6Q9UBN7 AC007787.1-201ENST00000588095 1583 ntBASIC17.05■□□□□ 0.32
HDAC6Q9UBN7 STEAP3-202ENST00000393107 1871 ntAPPRIS P1 TSL 1 (best) BASIC17.05■□□□□ 0.32
HDAC6Q9UBN7 CD300C-201ENST00000330793 1517 ntAPPRIS P1 TSL 1 (best) BASIC17.05■□□□□ 0.32
HDAC6Q9UBN7 LRRC59-203ENST00000576448 1531 ntBASIC17.05■□□□□ 0.32
HDAC6Q9UBN7 KCNS1-201ENST00000306117 4538 ntAPPRIS P1 TSL 1 (best) BASIC17.05■□□□□ 0.32
Retrieved 100 of 98,524 protein–RNA pairs in 66.8 ms