Protein–RNA interactions for Protein: Q9NWS1

PARPBP, PCNA-interacting partner, humanhuman

Predictions only

Length 579 aa.

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Protein RNA Prediction (catRAPID) Interaction (ENCODE eCLIP)
Gene UniProt Accession Transcript Symbol Ensembl Transcript ID Length Transcript Status Prediction Score Prediction z-Score p-Value Fold Change
PARPBPQ9NWS1 AL109954.1-202ENST00000564051 2148 ntBASIC13.58□□□□□ -0.24
PARPBPQ9NWS1 CD300C-201ENST00000330793 1517 ntAPPRIS P1 TSL 1 (best) BASIC13.58□□□□□ -0.24
PARPBPQ9NWS1 EIF3K-203ENST00000545173 1327 ntAPPRIS ALT1 TSL 2 BASIC13.58□□□□□ -0.24
PARPBPQ9NWS1 IL17RD-201ENST00000296318 8720 ntAPPRIS P1 TSL 1 (best) BASIC13.58□□□□□ -0.24
PARPBPQ9NWS1 ANKMY2-201ENST00000306999 2555 ntAPPRIS P1 TSL 1 (best) BASIC13.58□□□□□ -0.24
PARPBPQ9NWS1 STARD8-201ENST00000252336 4862 ntAPPRIS P3 TSL 1 (best) BASIC13.58□□□□□ -0.24
PARPBPQ9NWS1 PMS1-221ENST00000624204 3417 ntTSL 2 BASIC13.58□□□□□ -0.24
PARPBPQ9NWS1 FYN-205ENST00000368682 3234 ntAPPRIS ALT1 TSL 5 BASIC13.58□□□□□ -0.24
PARPBPQ9NWS1 CBLN4-201ENST00000064571 3024 ntAPPRIS P1 TSL 1 (best) BASIC13.58□□□□□ -0.24
PARPBPQ9NWS1 KLHDC7A-201ENST00000400664 5145 ntAPPRIS P1 BASIC13.58□□□□□ -0.24
PARPBPQ9NWS1 UBE2I-201ENST00000325437 2832 ntAPPRIS P1 TSL 3 BASIC13.58□□□□□ -0.24
PARPBPQ9NWS1 LONP1-213ENST00000590729 2626 ntTSL 1 (best) BASIC13.58□□□□□ -0.24
PARPBPQ9NWS1 ASAH1-249ENST00000637528 2215 ntTSL 5 BASIC13.58□□□□□ -0.24
PARPBPQ9NWS1 AL162457.1-201ENST00000317652 2000 ntTSL 2 BASIC13.57□□□□□ -0.24
PARPBPQ9NWS1 GNB1L-201ENST00000329517 6706 ntAPPRIS P1 TSL 1 (best) BASIC13.57□□□□□ -0.24
PARPBPQ9NWS1 MCFD2-201ENST00000319466 4182 ntAPPRIS P1 TSL 1 (best) BASIC13.57□□□□□ -0.24
PARPBPQ9NWS1 MGRN1-206ENST00000586183 1841 ntAPPRIS ALT2 TSL 5 BASIC13.57□□□□□ -0.24
PARPBPQ9NWS1 SPG21-203ENST00000433215 1613 ntAPPRIS P1 TSL 1 (best) BASIC13.57□□□□□ -0.24
PARPBPQ9NWS1 MAPKAP1-201ENST00000265960 3395 ntAPPRIS P1 TSL 1 (best) BASIC13.57□□□□□ -0.24
PARPBPQ9NWS1 TXNDC2-206ENST00000611534 2066 ntAPPRIS ALT2 TSL 5 BASIC13.57□□□□□ -0.24
PARPBPQ9NWS1 RAPGEF1-202ENST00000372190 6045 ntAPPRIS P4 TSL 1 (best) BASIC13.57□□□□□ -0.24
PARPBPQ9NWS1 C12orf73-207ENST00000549478 1446 ntAPPRIS P1 TSL 1 (best) BASIC13.57□□□□□ -0.24
PARPBPQ9NWS1 SRC-202ENST00000373558 4304 ntTSL 5 BASIC13.57□□□□□ -0.24
PARPBPQ9NWS1 MAD1L1-203ENST00000402746 2355 ntTSL 2 BASIC13.57□□□□□ -0.24
PARPBPQ9NWS1 C7orf49-201ENST00000393114 1482 ntAPPRIS P1 TSL 1 (best) BASIC13.57□□□□□ -0.24
PARPBPQ9NWS1 ZNF19-208ENST00000565637 2612 ntTSL 2 BASIC13.57□□□□□ -0.24
PARPBPQ9NWS1 TERT-201ENST00000310581 4018 ntAPPRIS P3 TSL 1 (best) BASIC13.57□□□□□ -0.24
PARPBPQ9NWS1 B9D1-201ENST00000261499 908 ntAPPRIS P1 TSL 1 (best) BASIC13.57□□□□□ -0.24
PARPBPQ9NWS1 LST1-202ENST00000303757 604 ntTSL 1 (best) BASIC13.57□□□□□ -0.24
PARPBPQ9NWS1 VHLL-201ENST00000339922 676 ntAPPRIS P1 BASIC13.57□□□□□ -0.24
PARPBPQ9NWS1 VAPA-201ENST00000340541 1227 ntTSL 5 BASIC13.57□□□□□ -0.24
PARPBPQ9NWS1 MGST3-203ENST00000367885 680 ntTSL 2 BASIC13.57□□□□□ -0.24
PARPBPQ9NWS1 PFDN6-202ENST00000374607 598 ntAPPRIS P1 TSL 2 BASIC13.57□□□□□ -0.24
PARPBPQ9NWS1 PFDN6-203ENST00000374610 521 ntAPPRIS P1 TSL 2 BASIC13.57□□□□□ -0.24
PARPBPQ9NWS1 B9D1-203ENST00000395615 805 ntTSL 3 BASIC13.57□□□□□ -0.24
PARPBPQ9NWS1 AL139094.1-201ENST00000405549 1188 ntBASIC13.57□□□□□ -0.24
PARPBPQ9NWS1 AC005034.1-201ENST00000426657 489 ntBASIC13.57□□□□□ -0.24
PARPBPQ9NWS1 AC099754.1-201ENST00000435884 454 ntTSL 3 BASIC13.57□□□□□ -0.24
PARPBPQ9NWS1 PNKD-204ENST00000436005 978 ntTSL 5 BASIC13.57□□□□□ -0.24
PARPBPQ9NWS1 AL355864.2-201ENST00000447420 863 ntBASIC13.57□□□□□ -0.24
PARPBPQ9NWS1 GS1-24F4.2-201ENST00000500823 1110 ntTSL 1 (best) BASIC13.57□□□□□ -0.24
PARPBPQ9NWS1 AC022137.2-201ENST00000503482 481 ntBASIC13.57□□□□□ -0.24
PARPBPQ9NWS1 FUZ-207ENST00000526575 482 ntTSL 4 BASIC13.57□□□□□ -0.24
PARPBPQ9NWS1 CD4-210ENST00000541982 1187 ntTSL 1 (best) BASIC13.57□□□□□ -0.24
PARPBPQ9NWS1 AC243562.3-201ENST00000559866 1212 ntTSL 1 (best) BASIC13.57□□□□□ -0.24
PARPBPQ9NWS1 FXYD6-216ENST00000584230 566 ntAPPRIS ALT1 TSL 3 BASIC13.57□□□□□ -0.24
PARPBPQ9NWS1 PFAS-212ENST00000625942 396 ntTSL 5 BASIC13.57□□□□□ -0.24
PARPBPQ9NWS1 NRP2-201ENST00000272849 5909 ntTSL 1 (best) BASIC13.57□□□□□ -0.24
PARPBPQ9NWS1 CTNNBL1-209ENST00000621317 1990 ntAPPRIS ALT1 TSL 5 BASIC13.57□□□□□ -0.24
PARPBPQ9NWS1 NDUFV1-202ENST00000415352 1512 ntAPPRIS ALT1 TSL 2 BASIC13.57□□□□□ -0.24
PARPBPQ9NWS1 UBE3A-220ENST00000630424 5075 ntAPPRIS P3 TSL 5 BASIC13.57□□□□□ -0.24
PARPBPQ9NWS1 AC134312.5-201ENST00000568031 1313 ntBASIC13.57□□□□□ -0.24
PARPBPQ9NWS1 NSUN5P1-206ENST00000457988 1836 ntTSL 2 BASIC13.57□□□□□ -0.24
PARPBPQ9NWS1 CEP70-213ENST00000489254 1811 ntAPPRIS ALT2 TSL 2 BASIC13.57□□□□□ -0.24
PARPBPQ9NWS1 POP4-201ENST00000221770 2321 ntTSL 1 (best) BASIC13.57□□□□□ -0.24
PARPBPQ9NWS1 ZC3HAV1-203ENST00000464606 4776 ntAPPRIS ALT2 TSL 5 BASIC13.57□□□□□ -0.24
PARPBPQ9NWS1 C16orf54-201ENST00000329410 2585 ntAPPRIS P1 TSL 1 (best) BASIC13.57□□□□□ -0.24
PARPBPQ9NWS1 CPT2-201ENST00000371486 3094 ntAPPRIS P1 TSL 1 (best) BASIC13.57□□□□□ -0.24
PARPBPQ9NWS1 NRBP1-201ENST00000233557 2887 ntAPPRIS P1 TSL 2 BASIC13.57□□□□□ -0.24
PARPBPQ9NWS1 PATZ1-203ENST00000351933 3638 ntTSL 1 (best) BASIC13.57□□□□□ -0.24
PARPBPQ9NWS1 PHF14-215ENST00000634607 3407 ntAPPRIS P1 TSL 5 BASIC13.57□□□□□ -0.24
PARPBPQ9NWS1 SLC4A5-201ENST00000346834 6233 ntAPPRIS P4 TSL 5 BASIC13.57□□□□□ -0.24
PARPBPQ9NWS1 RBFOX3-211ENST00000583458 2934 ntAPPRIS ALT2 TSL 5 BASIC13.57□□□□□ -0.24
PARPBPQ9NWS1 TPRX1-201ENST00000322175 1924 ntTSL 1 (best) BASIC13.56□□□□□ -0.24
PARPBPQ9NWS1 BRAP-201ENST00000327551 1947 ntTSL 1 (best) BASIC13.56□□□□□ -0.24
PARPBPQ9NWS1 COX10-AS1-202ENST00000449363 1944 ntTSL 2 BASIC13.56□□□□□ -0.24
PARPBPQ9NWS1 SCAP-206ENST00000428413 3749 ntTSL 5 BASIC13.56□□□□□ -0.24
PARPBPQ9NWS1 SAMD4A-202ENST00000392067 6833 ntAPPRIS P1 TSL 2 BASIC13.56□□□□□ -0.24
PARPBPQ9NWS1 UBA6-AS1-201ENST00000498917 1445 ntTSL 1 (best) BASIC13.56□□□□□ -0.24
PARPBPQ9NWS1 PPP1R27-202ENST00000570394 1443 ntTSL 2 BASIC13.56□□□□□ -0.24
PARPBPQ9NWS1 PPIL6-202ENST00000424445 4031 ntTSL 5 BASIC13.56□□□□□ -0.24
PARPBPQ9NWS1 CGN-201ENST00000271636 5091 ntAPPRIS P1 TSL 1 (best) BASIC13.56□□□□□ -0.24
PARPBPQ9NWS1 FGD5-AS1-202ENST00000424349 3792 ntTSL 1 (best) BASIC13.56□□□□□ -0.24
PARPBPQ9NWS1 AATBC-201ENST00000400385 4598 ntTSL 2 BASIC13.56□□□□□ -0.24
PARPBPQ9NWS1 LAP3-201ENST00000226299 2213 ntAPPRIS P1 TSL 1 (best) BASIC13.56□□□□□ -0.24
PARPBPQ9NWS1 TEN1-CDK3-202ENST00000569284 3287 ntAPPRIS P1 TSL 2 BASIC13.56□□□□□ -0.24
PARPBPQ9NWS1 RTEL1-203ENST00000360203 4623 ntAPPRIS P1 TSL 5 BASIC13.56□□□□□ -0.24
PARPBPQ9NWS1 TTC22-202ENST00000371276 3345 ntAPPRIS P1 TSL 5 BASIC13.56□□□□□ -0.24
PARPBPQ9NWS1 KLHDC3-203ENST00000332245 1494 ntTSL 2 BASIC13.56□□□□□ -0.24
PARPBPQ9NWS1 RPS6KC1-207ENST00000543470 4227 ntTSL 2 BASIC13.56□□□□□ -0.24
PARPBPQ9NWS1 AC138028.2-202ENST00000567968 4528 ntTSL 2 BASIC13.56□□□□□ -0.24
PARPBPQ9NWS1 SMARCA2-208ENST00000382194 5679 ntAPPRIS P1 TSL 5 BASIC13.56□□□□□ -0.24
PARPBPQ9NWS1 DMTN-204ENST00000415253 2394 ntTSL 5 BASIC13.56□□□□□ -0.24
PARPBPQ9NWS1 LIPE-AS1-205ENST00000594688 2383 ntTSL 2 BASIC13.56□□□□□ -0.24
PARPBPQ9NWS1 RAB41-201ENST00000276066 1071 ntAPPRIS P2 TSL 1 (best) BASIC13.56□□□□□ -0.24
PARPBPQ9NWS1 CACNG5-201ENST00000307139 926 ntAPPRIS P1 TSL 1 (best) BASIC13.56□□□□□ -0.24
PARPBPQ9NWS1 ZNRD1-201ENST00000332435 864 ntAPPRIS P1 TSL 1 (best) BASIC13.56□□□□□ -0.24
PARPBPQ9NWS1 NDUFB8-202ENST00000370320 684 ntTSL 3 BASIC13.56□□□□□ -0.24
PARPBPQ9NWS1 RAB41-202ENST00000374473 1074 ntAPPRIS ALT2 TSL 5 BASIC13.56□□□□□ -0.24
PARPBPQ9NWS1 DSCR3-204ENST00000399001 821 ntTSL 2 BASIC13.56□□□□□ -0.24
PARPBPQ9NWS1 KRTAP10-1-201ENST00000400375 1215 ntAPPRIS P1 BASIC13.56□□□□□ -0.24
PARPBPQ9NWS1 AL121601.1-201ENST00000426367 326 ntTSL 2 BASIC13.56□□□□□ -0.24
PARPBPQ9NWS1 GNB3-202ENST00000435982 1110 ntAPPRIS ALT1 TSL 1 (best) BASIC13.56□□□□□ -0.24
PARPBPQ9NWS1 SFTPC-202ENST00000437090 773 ntTSL 3 BASIC13.56□□□□□ -0.24
PARPBPQ9NWS1 SNHG11-209ENST00000440918 556 ntTSL 3 BASIC13.56□□□□□ -0.24
PARPBPQ9NWS1 GIMAP3P-201ENST00000495150 836 ntBASIC13.56□□□□□ -0.24
PARPBPQ9NWS1 LINC01585-201ENST00000500496 1295 ntTSL 1 (best) BASIC13.56□□□□□ -0.24
PARPBPQ9NWS1 LINC00824-206ENST00000523173 920 ntTSL 2 BASIC13.56□□□□□ -0.24
PARPBPQ9NWS1 AC068587.3-201ENST00000526613 355 ntBASIC13.56□□□□□ -0.24
PARPBPQ9NWS1 FKBP5-203ENST00000539068 3827 ntAPPRIS P1 TSL 1 (best) BASIC13.56□□□□□ -0.24
Retrieved 100 of 98,524 protein–RNA pairs in 43.2 ms