Protein–RNA interactions for Protein: Q9BY42

RTFDC1, Protein RTF2 homolog, humanhuman

Predicted RBP Predictions only

Length 306 aa.

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Protein RNA Prediction (catRAPID) Interaction (ENCODE eCLIP)
Gene UniProt Accession Transcript Symbol Ensembl Transcript ID Length Transcript Status Prediction Score Prediction z-Score p-Value Fold Change
RTFDC1Q9BY42 PHTF1-201ENST00000357783 2747 ntTSL 1 (best) BASIC18.04■□□□□ 0.48
RTFDC1Q9BY42 PPP1CB-202ENST00000358506 4771 ntAPPRIS P1 TSL 5 BASIC18.04■□□□□ 0.48
RTFDC1Q9BY42 COPS7B-224ENST00000620578 2500 ntTSL 2 BASIC18.04■□□□□ 0.48
RTFDC1Q9BY42 ENDOV-213ENST00000520367 2680 ntTSL 2 BASIC18.04■□□□□ 0.48
RTFDC1Q9BY42 CNKSR1-214ENST00000531191 2673 ntTSL 5 BASIC18.04■□□□□ 0.48
RTFDC1Q9BY42 KLK3-216ENST00000617027 1341 ntTSL 1 (best) BASIC18.03■□□□□ 0.48
RTFDC1Q9BY42 DGKZ-201ENST00000318201 3213 ntTSL 2 BASIC18.03■□□□□ 0.48
RTFDC1Q9BY42 SLC25A19-205ENST00000442286 1496 ntAPPRIS P1 TSL 5 BASIC18.03■□□□□ 0.48
RTFDC1Q9BY42 MGAT4B-202ENST00000337755 3027 ntTSL 2 BASIC18.03■□□□□ 0.48
RTFDC1Q9BY42 CNN1-201ENST00000252456 1633 ntAPPRIS P1 TSL 1 (best) BASIC18.03■□□□□ 0.48
RTFDC1Q9BY42 AC211486.1-201ENST00000275590 980 ntTSL 1 (best) BASIC18.03■□□□□ 0.48
RTFDC1Q9BY42 MBP-201ENST00000354542 575 ntTSL 2 BASIC18.03■□□□□ 0.48
RTFDC1Q9BY42 PSMB10-201ENST00000358514 1218 ntAPPRIS P1 TSL 1 (best) BASIC18.03■□□□□ 0.48
RTFDC1Q9BY42 TNNT2-202ENST00000360372 969 ntTSL 5 BASIC18.03■□□□□ 0.48
RTFDC1Q9BY42 TNNT2-204ENST00000367317 1050 ntAPPRIS ALT2 TSL 5 BASIC18.03■□□□□ 0.48
RTFDC1Q9BY42 TNNT2-209ENST00000421663 1084 ntAPPRIS ALT2 TSL 1 (best) BASIC18.03■□□□□ 0.48
RTFDC1Q9BY42 LINC00278-201ENST00000425031 528 ntTSL 2 BASIC18.03■□□□□ 0.48
RTFDC1Q9BY42 HLA-DQB2-232ENST00000437316 1214 ntAPPRIS P1 BASIC18.03■□□□□ 0.48
RTFDC1Q9BY42 TREX1-202ENST00000444177 1200 ntTSL 1 (best) BASIC18.03■□□□□ 0.48
RTFDC1Q9BY42 SNHG14-209ENST00000456576 544 ntTSL 1 (best) BASIC18.03■□□□□ 0.48
RTFDC1Q9BY42 AC092535.3-201ENST00000504969 468 ntTSL 3 BASIC18.03■□□□□ 0.48
RTFDC1Q9BY42 AC010754.1-201ENST00000582300 1061 ntTSL 3 BASIC18.03■□□□□ 0.48
RTFDC1Q9BY42 ZNF772-207ENST00000601768 482 ntTSL 3 BASIC18.03■□□□□ 0.48
RTFDC1Q9BY42 MIR6756-201ENST00000616240 63 ntBASIC18.03■□□□□ 0.48
RTFDC1Q9BY42 AC079325.2-202ENST00000641031 462 ntAPPRIS ALT2 BASIC18.03■□□□□ 0.48
RTFDC1Q9BY42 FLJ31104-201ENST00000500093 2289 ntTSL 1 (best) BASIC18.03■□□□□ 0.48
RTFDC1Q9BY42 MIR762HG-203ENST00000570025 1429 ntTSL 2 BASIC18.03■□□□□ 0.48
RTFDC1Q9BY42 ARHGAP9-203ENST00000424809 2569 ntTSL 2 BASIC18.03■□□□□ 0.48
RTFDC1Q9BY42 C6orf132-201ENST00000341865 6210 ntAPPRIS P2 TSL 5 BASIC18.03■□□□□ 0.48
RTFDC1Q9BY42 THAP10-201ENST00000249861 2399 ntAPPRIS P1 TSL 1 (best) BASIC18.03■□□□□ 0.48
RTFDC1Q9BY42 TMEM132E-201ENST00000321639 5631 ntAPPRIS ALT2 TSL 5 BASIC18.03■□□□□ 0.48
RTFDC1Q9BY42 ANKRD42-208ENST00000531895 1887 ntAPPRIS ALT2 TSL 1 (best) BASIC18.03■□□□□ 0.48
RTFDC1Q9BY42 LINC00996-201ENST00000477392 2043 ntTSL 1 (best) BASIC18.03■□□□□ 0.48
RTFDC1Q9BY42 SLC4A3-204ENST00000373760 4134 ntAPPRIS P1 TSL 5 BASIC18.03■□□□□ 0.48
RTFDC1Q9BY42 YTHDF2-209ENST00000542507 2825 ntAPPRIS P1 TSL 5 BASIC18.03■□□□□ 0.48
RTFDC1Q9BY42 PPHLN1-201ENST00000256678 1820 ntTSL 2 BASIC18.02■□□□□ 0.48
RTFDC1Q9BY42 MINDY1-201ENST00000312210 2400 ntTSL 2 BASIC18.02■□□□□ 0.48
RTFDC1Q9BY42 DKC1-201ENST00000369550 2577 ntAPPRIS P3 TSL 1 (best) BASIC18.02■□□□□ 0.48
RTFDC1Q9BY42 SEPT9-202ENST00000423034 3984 ntAPPRIS ALT1 TSL 1 (best) BASIC18.02■□□□□ 0.48
RTFDC1Q9BY42 MAEA-207ENST00000505177 1340 ntTSL 5 BASIC18.02■□□□□ 0.48
RTFDC1Q9BY42 HNRNPLL-212ENST00000608859 3035 ntTSL 5 BASIC18.02■□□□□ 0.48
RTFDC1Q9BY42 ABCB8-212ENST00000477719 1625 ntTSL 5 BASIC18.02■□□□□ 0.48
RTFDC1Q9BY42 HORMAD1-201ENST00000322343 1771 ntTSL 1 (best) BASIC18.02■□□□□ 0.48
RTFDC1Q9BY42 MITF-204ENST00000352241 4814 ntAPPRIS ALT1 TSL 1 (best) BASIC18.02■□□□□ 0.48
RTFDC1Q9BY42 PPP2R5D-206ENST00000472118 2963 ntAPPRIS ALT2 TSL 5 BASIC18.02■□□□□ 0.48
RTFDC1Q9BY42 EIF2AK4-201ENST00000263791 5499 ntAPPRIS P1 TSL 2 BASIC18.02■□□□□ 0.48
RTFDC1Q9BY42 SLC13A3-205ENST00000417157 876 ntTSL 1 (best) BASIC18.02■□□□□ 0.48
RTFDC1Q9BY42 LAMA4-208ENST00000431543 1080 ntTSL 1 (best) BASIC18.02■□□□□ 0.48
RTFDC1Q9BY42 PTPA-215ENST00000432124 567 ntTSL 4 BASIC18.02■□□□□ 0.48
RTFDC1Q9BY42 LINC00665-203ENST00000438368 1863 ntTSL 5 BASIC18.02■□□□□ 0.48
RTFDC1Q9BY42 RPSAP15-201ENST00000448168 861 ntBASIC18.02■□□□□ 0.48
RTFDC1Q9BY42 DUTP3-201ENST00000450025 415 ntBASIC18.02■□□□□ 0.48
RTFDC1Q9BY42 KRT8P31-201ENST00000504812 1408 ntBASIC18.02■□□□□ 0.48
RTFDC1Q9BY42 MPZL3-203ENST00000525386 973 ntTSL 1 (best) BASIC18.02■□□□□ 0.48
RTFDC1Q9BY42 LINC02417-201ENST00000542449 515 ntTSL 2 BASIC18.02■□□□□ 0.48
RTFDC1Q9BY42 RBM8B-201ENST00000555532 525 ntBASIC18.02■□□□□ 0.48
RTFDC1Q9BY42 JMJD8-203ENST00000562824 1015 ntAPPRIS ALT2 TSL 1 (best) BASIC18.02■□□□□ 0.48
RTFDC1Q9BY42 AC093752.3-201ENST00000567343 901 ntBASIC18.02■□□□□ 0.48
RTFDC1Q9BY42 AC040162.4-201ENST00000574912 1185 ntAPPRIS P1 TSL 3 BASIC18.02■□□□□ 0.48
RTFDC1Q9BY42 AC009084.3-201ENST00000623356 437 ntBASIC18.02■□□□□ 0.48
RTFDC1Q9BY42 CYP1B1-AS1-221ENST00000627172 995 ntTSL 5 BASIC18.02■□□□□ 0.48
RTFDC1Q9BY42 FBLN1-202ENST00000327858 2896 ntAPPRIS P1 TSL 1 (best) BASIC18.02■□□□□ 0.48
RTFDC1Q9BY42 PAPD5-202ENST00000436909 4635 ntAPPRIS P1 TSL 2 BASIC18.02■□□□□ 0.47
RTFDC1Q9BY42 RAB40B-206ENST00000571995 3859 ntAPPRIS P1 TSL 1 (best) BASIC18.02■□□□□ 0.47
RTFDC1Q9BY42 AC007292.2-201ENST00000593524 1812 ntBASIC18.02■□□□□ 0.47
RTFDC1Q9BY42 TMEM258-207ENST00000543510 1692 ntTSL 2 BASIC18.02■□□□□ 0.47
RTFDC1Q9BY42 AC126365.1-201ENST00000578585 1514 ntBASIC18.02■□□□□ 0.47
RTFDC1Q9BY42 SLC19A2-202ENST00000367804 2976 ntTSL 1 (best) BASIC18.02■□□□□ 0.47
RTFDC1Q9BY42 EDA-203ENST00000374552 5278 ntAPPRIS P3 TSL 1 (best) BASIC18.02■□□□□ 0.47
RTFDC1Q9BY42 THUMPD3-210ENST00000515662 2390 ntAPPRIS P1 TSL 1 (best) BASIC18.02■□□□□ 0.47
RTFDC1Q9BY42 ABR-203ENST00000536794 2213 ntTSL 2 BASIC18.02■□□□□ 0.47
RTFDC1Q9BY42 PHF10-205ENST00000612128 4395 ntTSL 1 (best) BASIC18.02■□□□□ 0.47
RTFDC1Q9BY42 VIPR2-201ENST00000262178 3944 ntAPPRIS P2 TSL 1 (best) BASIC18.02■□□□□ 0.47
RTFDC1Q9BY42 YY1AP1-211ENST00000368340 2927 ntAPPRIS ALT2 TSL 1 (best) BASIC18.02■□□□□ 0.47
RTFDC1Q9BY42 ACTL6A-202ENST00000429709 1901 ntAPPRIS P1 TSL 1 (best) BASIC18.02■□□□□ 0.47
RTFDC1Q9BY42 DSCAM-201ENST00000400454 8552 ntAPPRIS P1 TSL 1 (best) BASIC18.02■□□□□ 0.47
RTFDC1Q9BY42 SPAG8-209ENST00000484764 1618 ntAPPRIS ALT2 TSL 5 BASIC18.01■□□□□ 0.47
RTFDC1Q9BY42 FAM57B-202ENST00000380495 2313 ntAPPRIS P1 TSL 1 (best) BASIC18.01■□□□□ 0.47
RTFDC1Q9BY42 POM121C-208ENST00000615331 5835 ntAPPRIS P2 TSL 1 (best) BASIC18.01■□□□□ 0.47
RTFDC1Q9BY42 FOS-201ENST00000303562 2158 ntAPPRIS P1 TSL 1 (best) BASIC18.01■□□□□ 0.47
RTFDC1Q9BY42 ANKRD44-203ENST00000409153 2724 ntTSL 2 BASIC18.01■□□□□ 0.47
RTFDC1Q9BY42 FAM86B1-216ENST00000533852 2043 ntAPPRIS ALT2 TSL 5 BASIC18.01■□□□□ 0.47
RTFDC1Q9BY42 AC023024.1-201ENST00000558838 2590 ntTSL 1 (best) BASIC18.01■□□□□ 0.47
RTFDC1Q9BY42 AC018629.1-201ENST00000623381 1736 ntBASIC18.01■□□□□ 0.47
RTFDC1Q9BY42 TMBIM7P-203ENST00000641617 1718 ntBASIC18.01■□□□□ 0.47
RTFDC1Q9BY42 RHD-202ENST00000342055 1557 ntTSL 1 (best) BASIC18.01■□□□□ 0.47
RTFDC1Q9BY42 PSMD13-203ENST00000431206 1591 ntTSL 2 BASIC18.01■□□□□ 0.47
RTFDC1Q9BY42 TRAPPC11-201ENST00000334690 4552 ntAPPRIS P1 TSL 1 (best) BASIC18.01■□□□□ 0.47
RTFDC1Q9BY42 PSMD14-201ENST00000409682 1954 ntAPPRIS P1 TSL 1 (best) BASIC18.01■□□□□ 0.47
RTFDC1Q9BY42 RAB3IP-204ENST00000378815 2386 ntTSL 2 BASIC18.01■□□□□ 0.47
RTFDC1Q9BY42 CYP51A1P3-201ENST00000400072 1428 ntBASIC18.01■□□□□ 0.47
RTFDC1Q9BY42 KCTD1-207ENST00000580059 1425 ntAPPRIS P1 TSL 3 BASIC18.01■□□□□ 0.47
RTFDC1Q9BY42 TBC1D1-219ENST00000615497 2383 ntTSL 2 BASIC18.01■□□□□ 0.47
RTFDC1Q9BY42 HDHD3-201ENST00000238379 1834 ntAPPRIS P1 TSL 1 (best) BASIC18.01■□□□□ 0.47
RTFDC1Q9BY42 DMRTA1-201ENST00000325870 5569 ntAPPRIS P1 TSL 1 (best) BASIC18.01■□□□□ 0.47
RTFDC1Q9BY42 KRTAP19-5-201ENST00000334151 461 ntAPPRIS P1 BASIC18.01■□□□□ 0.47
RTFDC1Q9BY42 AL583805.1-201ENST00000391389 531 ntBASIC18.01■□□□□ 0.47
RTFDC1Q9BY42 RPS9-204ENST00000391753 709 ntAPPRIS P1 TSL 1 (best) BASIC18.01■□□□□ 0.47
RTFDC1Q9BY42 GEMIN7-202ENST00000391951 716 ntAPPRIS P1 TSL 2 BASIC18.01■□□□□ 0.47
RTFDC1Q9BY42 GSTP1-201ENST00000398603 700 ntTSL 3 BASIC18.01■□□□□ 0.47
Retrieved 100 of 98,524 protein–RNA pairs in 52.3 ms