Protein–RNA interactions for Protein: Q99616

CCL13, C-C motif chemokine 13, humanhuman

Predictions only

Length 98 aa.

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Protein RNA Prediction (catRAPID) Interaction (ENCODE eCLIP)
Gene UniProt Accession Transcript Symbol Ensembl Transcript ID Length Transcript Status Prediction Score Prediction z-Score p-Value Fold Change
CCL13Q99616 GCC1-201ENST00000321407 4149 ntAPPRIS P1 TSL 1 (best) BASIC12.67□□□□□ -0.38
CCL13Q99616 GNB2-202ENST00000393924 1524 ntAPPRIS P1 TSL 1 (best) BASIC12.67□□□□□ -0.38
CCL13Q99616 SYNRG-217ENST00000612223 8229 ntAPPRIS P4 TSL 1 (best) BASIC12.67□□□□□ -0.38
CCL13Q99616 CCDC140-201ENST00000295226 1699 ntAPPRIS P2 TSL 1 (best) BASIC12.67□□□□□ -0.38
CCL13Q99616 MCM7-202ENST00000343023 1968 ntTSL 1 (best) BASIC12.67□□□□□ -0.38
CCL13Q99616 ABTB1-202ENST00000453791 1961 ntTSL 1 (best) BASIC12.67□□□□□ -0.38
CCL13Q99616 RPTOR-203ENST00000570891 2286 ntTSL 1 (best) BASIC12.67□□□□□ -0.38
CCL13Q99616 NYNRIN-201ENST00000382554 7857 ntAPPRIS P1 TSL 5 BASIC12.67□□□□□ -0.38
CCL13Q99616 UBAP1-201ENST00000297661 2735 ntAPPRIS P1 TSL 1 (best) BASIC12.67□□□□□ -0.38
CCL13Q99616 TNFRSF11A-206ENST00000617039 3756 ntAPPRIS ALT2 TSL 1 (best) BASIC12.67□□□□□ -0.38
CCL13Q99616 KIAA1211L-201ENST00000397899 3907 ntAPPRIS P2 TSL 1 (best) BASIC12.67□□□□□ -0.38
CCL13Q99616 NIPAL4-201ENST00000311946 3274 ntAPPRIS P3 TSL 1 (best) BASIC12.66□□□□□ -0.38
CCL13Q99616 SUPT20H-212ENST00000475892 2836 ntTSL 1 (best) BASIC12.66□□□□□ -0.38
CCL13Q99616 TBC1D3G-201ENST00000569055 2065 ntAPPRIS P1 TSL 1 (best) BASIC12.66□□□□□ -0.38
CCL13Q99616 TBC1D3H-201ENST00000610350 2065 ntAPPRIS P1 TSL 1 (best) BASIC12.66□□□□□ -0.38
CCL13Q99616 TBC1D3L-202ENST00000617678 2065 ntAPPRIS P1 TSL 1 (best) BASIC12.66□□□□□ -0.38
CCL13Q99616 TP73-213ENST00000604479 1623 ntTSL 5 BASIC12.66□□□□□ -0.38
CCL13Q99616 NBEA-201ENST00000310336 10794 ntAPPRIS ALT1 TSL 1 (best) BASIC12.66□□□□□ -0.38
CCL13Q99616 AFF4-201ENST00000265343 9552 ntAPPRIS P1 TSL 1 (best) BASIC12.66□□□□□ -0.38
CCL13Q99616 ACSS2-202ENST00000360596 3065 ntAPPRIS P1 TSL 1 (best) BASIC12.66□□□□□ -0.38
CCL13Q99616 AL669831.1-201ENST00000506640 6432 ntTSL 5 BASIC12.66□□□□□ -0.38
CCL13Q99616 AJ011931.1-201ENST00000618749 2492 ntBASIC12.66□□□□□ -0.38
CCL13Q99616 ZNF586-203ENST00000396154 2163 ntAPPRIS P1 TSL 1 (best) BASIC12.66□□□□□ -0.38
CCL13Q99616 NCKAP5L-201ENST00000335999 4900 ntAPPRIS P1 TSL 5 BASIC12.66□□□□□ -0.38
CCL13Q99616 TRAK1-208ENST00000484786 2008 ntTSL 5 BASIC12.66□□□□□ -0.38
CCL13Q99616 PIGT-246ENST00000639499 2021 ntTSL 5 BASIC12.66□□□□□ -0.38
CCL13Q99616 FAM118B-210ENST00000627851 1862 ntTSL 5 BASIC12.66□□□□□ -0.38
CCL13Q99616 RAB29-201ENST00000235932 1723 ntAPPRIS P1 TSL 1 (best) BASIC12.66□□□□□ -0.38
CCL13Q99616 FGF7P3-202ENST00000640245 1707 ntTSL 4 BASIC12.66□□□□□ -0.38
CCL13Q99616 PDE8B-202ENST00000333194 2572 ntAPPRIS ALT2 TSL 1 (best) BASIC12.66□□□□□ -0.38
CCL13Q99616 MARS-233ENST00000628866 2583 ntTSL 5 BASIC12.66□□□□□ -0.38
CCL13Q99616 SCGN-202ENST00000377961 1447 ntAPPRIS P1 TSL 1 (best) BASIC12.66□□□□□ -0.38
CCL13Q99616 RET-201ENST00000340058 4149 ntAPPRIS ALT2 TSL 1 (best) BASIC12.66□□□□□ -0.38
CCL13Q99616 DEGS1-201ENST00000323699 2101 ntAPPRIS P1 TSL 1 (best) BASIC12.66□□□□□ -0.38
CCL13Q99616 PRKN-201ENST00000338468 1276 ntTSL 1 (best) BASIC12.66□□□□□ -0.38
CCL13Q99616 VCX3B-202ENST00000381032 1171 ntAPPRIS P2 TSL 5 BASIC12.66□□□□□ -0.38
CCL13Q99616 AC005229.1-201ENST00000392885 409 ntBASIC12.66□□□□□ -0.38
CCL13Q99616 AL606534.2-205ENST00000437691 346 ntTSL 5 BASIC12.66□□□□□ -0.38
CCL13Q99616 HEBP2-202ENST00000448741 661 ntTSL 5 BASIC12.66□□□□□ -0.38
CCL13Q99616 TMEM14B-204ENST00000461342 559 ntTSL 2 BASIC12.66□□□□□ -0.38
CCL13Q99616 CLRN2-201ENST00000511148 823 ntAPPRIS P1 TSL 1 (best) BASIC12.66□□□□□ -0.38
CCL13Q99616 RAMP2-202ENST00000587142 549 ntAPPRIS ALT1 TSL 1 (best) BASIC12.66□□□□□ -0.38
CCL13Q99616 RAMP2-203ENST00000588576 573 ntTSL 5 BASIC12.66□□□□□ -0.38
CCL13Q99616 IFNL3-202ENST00000613087 734 ntAPPRIS ALT2 TSL 1 (best) BASIC12.66□□□□□ -0.38
CCL13Q99616 ANXA2R-202ENST00000616064 1265 ntAPPRIS P1 BASIC12.66□□□□□ -0.38
CCL13Q99616 CCL4L2-214ENST00000617416 1258 ntTSL 1 (best) BASIC12.66□□□□□ -0.38
CCL13Q99616 FBXO45-202ENST00000440469 3689 ntTSL 2 BASIC12.66□□□□□ -0.38
CCL13Q99616 DRC3-216ENST00000584166 1953 ntTSL 5 BASIC12.66□□□□□ -0.38
CCL13Q99616 POM121-202ENST00000395270 7011 ntAPPRIS ALT2 TSL 1 (best) BASIC12.66□□□□□ -0.38
CCL13Q99616 VRK3-207ENST00000594092 1831 ntAPPRIS ALT2 TSL 1 (best) BASIC12.66□□□□□ -0.38
CCL13Q99616 EPB41L3-201ENST00000341928 4706 ntAPPRIS P3 TSL 1 (best) BASIC12.66□□□□□ -0.38
CCL13Q99616 TPD52-201ENST00000379096 4041 ntAPPRIS ALT1 TSL 1 (best) BASIC12.66□□□□□ -0.38
CCL13Q99616 MAX-205ENST00000358664 1546 ntAPPRIS P1 TSL 1 (best) BASIC12.66□□□□□ -0.38
CCL13Q99616 CHRDL1-205ENST00000482160 1537 ntTSL 2 BASIC12.66□□□□□ -0.38
CCL13Q99616 SPATA33-210ENST00000611218 1546 ntAPPRIS ALT2 TSL 2 BASIC12.66□□□□□ -0.38
CCL13Q99616 FECH-201ENST00000262093 3853 ntAPPRIS P3 TSL 1 (best) BASIC12.66□□□□□ -0.38
CCL13Q99616 CBS-204ENST00000398165 2605 ntAPPRIS P1 TSL 1 (best) BASIC12.66□□□□□ -0.38
CCL13Q99616 PRICKLE1-201ENST00000345127 5902 ntAPPRIS P1 TSL 1 (best) BASIC12.66□□□□□ -0.38
CCL13Q99616 GPD2-208ENST00000438166 2457 ntAPPRIS P1 TSL 1 (best) BASIC12.66□□□□□ -0.38
CCL13Q99616 SRPRA-206ENST00000532259 2453 ntTSL 2 BASIC12.66□□□□□ -0.38
CCL13Q99616 SLC16A1-207ENST00000538576 4374 ntAPPRIS P1 TSL 2 BASIC12.66□□□□□ -0.38
CCL13Q99616 HSD17B6-205ENST00000554643 1751 ntAPPRIS P1 TSL 5 BASIC12.66□□□□□ -0.38
CCL13Q99616 KIF22-208ENST00000569382 2020 ntTSL 5 BASIC12.66□□□□□ -0.38
CCL13Q99616 SRPK1-204ENST00000373825 4592 ntAPPRIS P1 TSL 1 (best) BASIC12.66□□□□□ -0.38
CCL13Q99616 MAPKBP1-215ENST00000514566 5394 ntTSL 1 (best) BASIC12.66□□□□□ -0.38
CCL13Q99616 WDR20-205ENST00000424963 2695 ntTSL 5 BASIC12.65□□□□□ -0.38
CCL13Q99616 TCHH-201ENST00000368804 6900 ntAPPRIS P1 TSL 5 BASIC12.65□□□□□ -0.38
CCL13Q99616 TM4SF4-201ENST00000305354 2101 ntAPPRIS P1 TSL 1 (best) BASIC12.65□□□□□ -0.38
CCL13Q99616 SELPLG-201ENST00000228463 1704 ntAPPRIS ALT2 TSL 2 BASIC12.65□□□□□ -0.38
CCL13Q99616 NCAPH2-201ENST00000299821 1996 ntAPPRIS ALT2 TSL 1 (best) BASIC12.65□□□□□ -0.38
CCL13Q99616 GPM6A-210ENST00000506894 2614 ntTSL 1 (best) BASIC12.65□□□□□ -0.38
CCL13Q99616 AC092718.8-201ENST00000640345 2892 ntAPPRIS P1 TSL 5 BASIC12.65□□□□□ -0.38
CCL13Q99616 TM4SF19-AS1-203ENST00000452051 1829 ntTSL 2 BASIC12.65□□□□□ -0.38
CCL13Q99616 PTPRU-205ENST00000460170 5337 ntTSL 1 (best) BASIC12.65□□□□□ -0.38
CCL13Q99616 CLPTM1-202ENST00000541297 2732 ntTSL 2 BASIC12.65□□□□□ -0.38
CCL13Q99616 RASGEF1C-206ENST00000522500 2055 ntTSL 2 BASIC12.65□□□□□ -0.38
CCL13Q99616 ELP6-201ENST00000296149 1401 ntAPPRIS P1 TSL 1 (best) BASIC12.65□□□□□ -0.38
CCL13Q99616 SULT2B1-202ENST00000323090 1447 ntAPPRIS ALT2 TSL 1 (best) BASIC12.65□□□□□ -0.38
CCL13Q99616 FOS-202ENST00000535987 1402 ntTSL 2 BASIC12.65□□□□□ -0.38
CCL13Q99616 ESRRB-207ENST00000556177 1427 ntAPPRIS P1 TSL 1 (best) BASIC12.65□□□□□ -0.38
CCL13Q99616 CAP1-205ENST00000372802 2964 ntAPPRIS ALT1 TSL 5 BASIC12.65□□□□□ -0.38
CCL13Q99616 LINC02228-204ENST00000642115 2962 ntBASIC12.65□□□□□ -0.38
CCL13Q99616 FRMD5-209ENST00000484674 2319 ntTSL 2 BASIC12.65□□□□□ -0.38
CCL13Q99616 DUS2-207ENST00000565263 2310 ntAPPRIS P1 TSL 1 (best) BASIC12.65□□□□□ -0.38
CCL13Q99616 SCLT1-209ENST00000511426 1696 ntAPPRIS ALT2 TSL 1 (best) BASIC12.65□□□□□ -0.38
CCL13Q99616 MUTYH-234ENST00000528013 1662 ntTSL 5 BASIC12.65□□□□□ -0.38
CCL13Q99616 CLDN22-201ENST00000323319 2581 ntAPPRIS P1 BASIC12.65□□□□□ -0.38
CCL13Q99616 C4orf19-201ENST00000284437 1949 ntAPPRIS P1 TSL 1 (best) BASIC12.65□□□□□ -0.38
CCL13Q99616 AC087164.1-202ENST00000583062 2158 ntTSL 1 (best) BASIC12.65□□□□□ -0.38
CCL13Q99616 SBF1P1-201ENST00000444527 5631 ntBASIC12.65□□□□□ -0.38
CCL13Q99616 ATP6V1F-201ENST00000249289 704 ntAPPRIS P1 TSL 1 (best) BASIC12.65□□□□□ -0.38
CCL13Q99616 CMA1-202ENST00000250378 937 ntAPPRIS P1 TSL 1 (best) BASIC12.65□□□□□ -0.38
CCL13Q99616 ZNRD1-201ENST00000332435 864 ntAPPRIS P1 TSL 1 (best) BASIC12.65□□□□□ -0.38
CCL13Q99616 UCHL3-201ENST00000377595 844 ntAPPRIS P1 TSL 1 (best) BASIC12.65□□□□□ -0.38
CCL13Q99616 AC007319.1-202ENST00000412276 829 ntTSL 5 BASIC12.65□□□□□ -0.38
CCL13Q99616 RHCE-206ENST00000413854 1198 ntTSL 1 (best) BASIC12.65□□□□□ -0.38
CCL13Q99616 COPS6-202ENST00000418625 1107 ntAPPRIS ALT2 TSL 5 BASIC12.65□□□□□ -0.38
CCL13Q99616 KRT43P-201ENST00000434019 910 ntBASIC12.65□□□□□ -0.38
CCL13Q99616 TMEM107-204ENST00000437139 747 ntAPPRIS ALT1 TSL 1 (best) BASIC12.65□□□□□ -0.38
CCL13Q99616 TMEM14B-212ENST00000475942 992 ntTSL 2 BASIC12.65□□□□□ -0.38
Retrieved 100 of 98,524 protein–RNA pairs in 30.3 ms