Protein–RNA interactions for Protein: Q96RK4

BBS4, Bardet-Biedl syndrome 4 protein, humanhuman

Predictions only

Length 519 aa.

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Protein RNA Prediction (catRAPID) Interaction (ENCODE eCLIP)
Gene UniProt Accession Transcript Symbol Ensembl Transcript ID Length Transcript Status Prediction Score Prediction z-Score p-Value Fold Change
BBS4Q96RK4 DSCR3-204ENST00000399001 821 ntTSL 2 BASIC14.37□□□□□ -0.11
BBS4Q96RK4 FAM207CP-201ENST00000443486 507 ntBASIC14.37□□□□□ -0.11
BBS4Q96RK4 AC097717.1-202ENST00000457577 740 ntTSL 3 BASIC14.37□□□□□ -0.11
BBS4Q96RK4 SELENOT-203ENST00000477889 944 ntTSL 5 BASIC14.37□□□□□ -0.11
BBS4Q96RK4 AC025442.1-201ENST00000521596 481 ntTSL 2 BASIC14.37□□□□□ -0.11
BBS4Q96RK4 YEATS4-202ENST00000548020 1100 ntTSL 2 BASIC14.37□□□□□ -0.11
BBS4Q96RK4 C17orf49-209ENST00000552775 779 ntTSL 5 BASIC14.37□□□□□ -0.11
BBS4Q96RK4 LINC01220-201ENST00000558575 715 ntTSL 1 (best) BASIC14.37□□□□□ -0.11
BBS4Q96RK4 AL390726.5-201ENST00000562942 871 ntTSL 2 BASIC14.37□□□□□ -0.11
BBS4Q96RK4 AC009088.3-201ENST00000563605 357 ntTSL 3 BASIC14.37□□□□□ -0.11
BBS4Q96RK4 MIF4GD-206ENST00000579119 856 ntTSL 3 BASIC14.37□□□□□ -0.11
BBS4Q96RK4 LINC02560-201ENST00000596379 459 ntBASIC14.37□□□□□ -0.11
BBS4Q96RK4 AL096865.1-201ENST00000606796 927 ntBASIC14.37□□□□□ -0.11
BBS4Q96RK4 AC007431.3-201ENST00000623221 587 ntBASIC14.37□□□□□ -0.11
BBS4Q96RK4 NEK10-206ENST00000429845 4250 ntAPPRIS P1 TSL 5 BASIC14.37□□□□□ -0.11
BBS4Q96RK4 ACOT7-210ENST00000608083 1403 ntAPPRIS ALT2 TSL 1 (best) BASIC14.37□□□□□ -0.11
BBS4Q96RK4 RPS23-201ENST00000296674 3437 ntAPPRIS P1 TSL 1 (best) BASIC14.37□□□□□ -0.11
BBS4Q96RK4 MAP1S-201ENST00000324096 3419 ntAPPRIS P3 TSL 1 (best) BASIC14.37□□□□□ -0.11
BBS4Q96RK4 CSNK1A1-202ENST00000377843 2559 ntAPPRIS ALT1 TSL 1 (best) BASIC14.37□□□□□ -0.11
BBS4Q96RK4 FGF7P3-202ENST00000640245 1707 ntTSL 4 BASIC14.37□□□□□ -0.11
BBS4Q96RK4 ANO10-213ENST00000451430 2019 ntTSL 2 BASIC14.37□□□□□ -0.11
BBS4Q96RK4 ZNF655-212ENST00000424881 4666 ntAPPRIS ALT2 TSL 2 BASIC14.37□□□□□ -0.11
BBS4Q96RK4 BRD1-205ENST00000457780 4997 ntTSL 5 BASIC14.37□□□□□ -0.11
BBS4Q96RK4 CDC25B-203ENST00000344256 3071 ntTSL 2 BASIC14.37□□□□□ -0.11
BBS4Q96RK4 CPSF7-202ENST00000394888 3650 ntAPPRIS P4 TSL 2 BASIC14.37□□□□□ -0.11
BBS4Q96RK4 GRAPL-201ENST00000344415 1308 ntAPPRIS P2 TSL 1 (best) BASIC14.37□□□□□ -0.11
BBS4Q96RK4 CMTM3-203ENST00000460097 1797 ntTSL 2 BASIC14.37□□□□□ -0.11
BBS4Q96RK4 TOM1L2-205ENST00000478943 2098 ntTSL 2 BASIC14.37□□□□□ -0.11
BBS4Q96RK4 PIGT-202ENST00000279036 2245 ntAPPRIS P1 TSL 1 (best) BASIC14.37□□□□□ -0.11
BBS4Q96RK4 SERPINA3-203ENST00000467132 2660 ntAPPRIS P1 TSL 2 BASIC14.37□□□□□ -0.11
BBS4Q96RK4 UMODL1-206ENST00000408989 5262 ntAPPRIS P4 TSL 1 (best) BASIC14.36□□□□□ -0.11
BBS4Q96RK4 BCAR1-207ENST00000538440 3192 ntAPPRIS ALT2 TSL 2 BASIC14.36□□□□□ -0.11
BBS4Q96RK4 AC068946.1-202ENST00000318673 2745 ntAPPRIS P1 TSL 2 BASIC14.36□□□□□ -0.11
BBS4Q96RK4 RTKN-202ENST00000272430 2142 ntAPPRIS ALT1 TSL 1 (best) BASIC14.36□□□□□ -0.11
BBS4Q96RK4 LILRP2-201ENST00000413439 2127 ntTSL 1 (best) BASIC14.36□□□□□ -0.11
BBS4Q96RK4 ADAD1-201ENST00000296513 1961 ntAPPRIS P1 TSL 2 BASIC14.36□□□□□ -0.11
BBS4Q96RK4 DDX49-201ENST00000247003 1830 ntAPPRIS P1 TSL 1 (best) BASIC14.36□□□□□ -0.11
BBS4Q96RK4 RIC1-201ENST00000251879 4127 ntTSL 1 (best) BASIC14.36□□□□□ -0.11
BBS4Q96RK4 GOLGA6L2-201ENST00000312015 1379 ntAPPRIS ALT2 TSL 2 BASIC14.36□□□□□ -0.11
BBS4Q96RK4 SEC13-201ENST00000337354 1363 ntAPPRIS ALT1 TSL 1 (best) BASIC14.36□□□□□ -0.11
BBS4Q96RK4 ZNF890P-201ENST00000422060 1352 ntTSL 2 BASIC14.36□□□□□ -0.11
BBS4Q96RK4 CPSF7-205ENST00000439958 3524 ntAPPRIS ALT1 TSL 1 (best) BASIC14.36□□□□□ -0.11
BBS4Q96RK4 RP1L1-202ENST00000382483 7973 ntAPPRIS P1 TSL 1 (best) BASIC14.36□□□□□ -0.11
BBS4Q96RK4 ERG28-201ENST00000256319 2633 ntAPPRIS P1 TSL 1 (best) BASIC14.36□□□□□ -0.11
BBS4Q96RK4 PKN2-201ENST00000316005 2632 ntTSL 5 BASIC14.36□□□□□ -0.11
BBS4Q96RK4 RPH3AL-202ENST00000331302 2606 ntAPPRIS P2 TSL 2 BASIC14.36□□□□□ -0.11
BBS4Q96RK4 TPGS2-201ENST00000334295 4030 ntAPPRIS P3 TSL 1 (best) BASIC14.36□□□□□ -0.11
BBS4Q96RK4 DDX56-201ENST00000258772 2336 ntAPPRIS P1 TSL 1 (best) BASIC14.36□□□□□ -0.11
BBS4Q96RK4 HVCN1-202ENST00000356742 2189 ntAPPRIS P1 TSL 1 (best) BASIC14.36□□□□□ -0.11
BBS4Q96RK4 FOXB1-201ENST00000396057 2957 ntAPPRIS P1 TSL 1 (best) BASIC14.36□□□□□ -0.11
BBS4Q96RK4 C6orf120-201ENST00000332290 2667 ntAPPRIS P1 BASIC14.36□□□□□ -0.11
BBS4Q96RK4 MVB12B-206ENST00000489637 2666 ntTSL 1 (best) BASIC14.36□□□□□ -0.11
BBS4Q96RK4 ERCC1-201ENST00000013807 1278 ntTSL 1 (best) BASIC14.36□□□□□ -0.11
BBS4Q96RK4 TMEM41A-201ENST00000296254 1060 ntTSL 2 BASIC14.36□□□□□ -0.11
BBS4Q96RK4 LRRN1-201ENST00000319331 3823 ntAPPRIS P1 TSL 1 (best) BASIC14.36□□□□□ -0.11
BBS4Q96RK4 CXorf40A-201ENST00000359293 974 ntAPPRIS P3 TSL 2 BASIC14.36□□□□□ -0.11
BBS4Q96RK4 SOCS2P1-201ENST00000417727 557 ntBASIC14.36□□□□□ -0.11
BBS4Q96RK4 AL442647.2-201ENST00000429864 857 ntBASIC14.36□□□□□ -0.11
BBS4Q96RK4 BCRP1-201ENST00000444246 691 ntBASIC14.36□□□□□ -0.11
BBS4Q96RK4 MYCLP2-201ENST00000449268 967 ntBASIC14.36□□□□□ -0.11
BBS4Q96RK4 AP001582.1-201ENST00000525856 295 ntBASIC14.36□□□□□ -0.11
BBS4Q96RK4 AC092552.1-201ENST00000547243 906 ntBASIC14.36□□□□□ -0.11
BBS4Q96RK4 AC005262.2-201ENST00000587701 452 ntTSL 5 BASIC14.36□□□□□ -0.11
BBS4Q96RK4 ZNF83-215ENST00000600714 810 ntTSL 3 BASIC14.36□□□□□ -0.11
BBS4Q96RK4 LINC01515-215ENST00000608678 854 ntTSL 5 BASIC14.36□□□□□ -0.11
BBS4Q96RK4 APOBEC3H-206ENST00000613677 730 ntAPPRIS ALT2 TSL 5 BASIC14.36□□□□□ -0.11
BBS4Q96RK4 NDUFS7-218ENST00000618074 688 ntTSL 5 BASIC14.36□□□□□ -0.11
BBS4Q96RK4 NDUFS7-219ENST00000620479 754 ntTSL 5 BASIC14.36□□□□□ -0.11
BBS4Q96RK4 SLC35A3-209ENST00000638338 2890 ntTSL 5 BASIC14.36□□□□□ -0.11
BBS4Q96RK4 RBM47-203ENST00000381795 4473 ntAPPRIS P3 TSL 2 BASIC14.36□□□□□ -0.11
BBS4Q96RK4 TNPO2-202ENST00000425528 5122 ntAPPRIS P4 TSL 5 BASIC14.36□□□□□ -0.11
BBS4Q96RK4 CICP14-201ENST00000629111 2732 ntBASIC14.36□□□□□ -0.11
BBS4Q96RK4 CELF4-223ENST00000603232 1906 ntAPPRIS ALT1 TSL 1 (best) BASIC14.36□□□□□ -0.11
BBS4Q96RK4 ZEB2-225ENST00000558170 4012 ntAPPRIS P2 TSL 1 (best) BASIC14.36□□□□□ -0.11
BBS4Q96RK4 ZNF777-201ENST00000247930 3233 ntAPPRIS P1 TSL 1 (best) BASIC14.36□□□□□ -0.11
BBS4Q96RK4 EBLN3P-202ENST00000625445 4520 ntTSL 1 (best) BASIC14.36□□□□□ -0.11
BBS4Q96RK4 USP35-204ENST00000530267 2419 ntTSL 2 BASIC14.36□□□□□ -0.11
BBS4Q96RK4 PDIA4-201ENST00000286091 2903 ntAPPRIS P1 TSL 1 (best) BASIC14.36□□□□□ -0.11
BBS4Q96RK4 OIT3-202ENST00000622652 1602 ntTSL 1 (best) BASIC14.36□□□□□ -0.11
BBS4Q96RK4 PDP1-203ENST00000517764 2140 ntAPPRIS P3 TSL 2 BASIC14.36□□□□□ -0.11
BBS4Q96RK4 HIST1H2AC-203ENST00000602637 1462 ntAPPRIS P1 TSL 2 BASIC14.36□□□□□ -0.11
BBS4Q96RK4 C19orf57-201ENST00000346736 2489 ntAPPRIS P2 TSL 2 BASIC14.36□□□□□ -0.11
BBS4Q96RK4 SF1-209ENST00000433274 2317 ntTSL 2 BASIC14.36□□□□□ -0.11
BBS4Q96RK4 FAM160A2-203ENST00000524416 3327 ntTSL 2 BASIC14.36□□□□□ -0.11
BBS4Q96RK4 ITGA6-202ENST00000409080 5306 ntTSL 2 BASIC14.36□□□□□ -0.11
BBS4Q96RK4 ZBED1-203ENST00000381223 4510 ntAPPRIS P1 TSL 2 BASIC14.36□□□□□ -0.11
BBS4Q96RK4 POMK-203ENST00000614426 1527 ntAPPRIS P1 TSL 4 BASIC14.36□□□□□ -0.11
BBS4Q96RK4 MLST8-201ENST00000301724 1735 ntTSL 1 (best) BASIC14.35□□□□□ -0.11
BBS4Q96RK4 PRPF3-201ENST00000324862 2433 ntAPPRIS P1 TSL 1 (best) BASIC14.35□□□□□ -0.11
BBS4Q96RK4 ZNF563-201ENST00000293725 2754 ntAPPRIS P1 TSL 1 (best) BASIC14.35□□□□□ -0.11
BBS4Q96RK4 SEC24D-202ENST00000419654 2786 ntTSL 5 BASIC14.35□□□□□ -0.11
BBS4Q96RK4 AGT-201ENST00000366667 2291 ntAPPRIS P1 TSL 1 (best) BASIC14.35□□□□□ -0.11
BBS4Q96RK4 RPS6KC1-207ENST00000543470 4227 ntTSL 2 BASIC14.35□□□□□ -0.11
BBS4Q96RK4 HIPK4-201ENST00000291823 2452 ntAPPRIS P1 TSL 1 (best) BASIC14.35□□□□□ -0.11
BBS4Q96RK4 ZNF772-202ENST00000356584 1799 ntAPPRIS ALT2 TSL 2 BASIC14.35□□□□□ -0.11
BBS4Q96RK4 VSIG10L-201ENST00000335624 3397 ntAPPRIS P1 TSL 5 BASIC14.35□□□□□ -0.11
BBS4Q96RK4 EVC2-201ENST00000310917 4828 ntAPPRIS ALT2 TSL 1 (best) BASIC14.35□□□□□ -0.11
BBS4Q96RK4 EIF4G1-218ENST00000434061 5026 ntTSL 2 BASIC14.35□□□□□ -0.11
BBS4Q96RK4 CTNNBL1-209ENST00000621317 1990 ntAPPRIS ALT1 TSL 5 BASIC14.35□□□□□ -0.11
BBS4Q96RK4 TUBB4B-201ENST00000340384 1637 ntAPPRIS P1 TSL 1 (best) BASIC14.35□□□□□ -0.11
Retrieved 100 of 98,524 protein–RNA pairs in 51.4 ms