Protein–RNA interactions for Protein: Q8ND04

SMG8, Protein SMG8, humanhuman

Known RBP Predictions only

Length 991 aa.

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Protein RNA Prediction (catRAPID) Interaction (ENCODE eCLIP)
Gene UniProt Accession Transcript Symbol Ensembl Transcript ID Length Transcript Status Prediction Score Prediction z-Score p-Value Fold Change
SMG8Q8ND04 TCP11L1-201ENST00000334274 2817 ntAPPRIS P1 TSL 1 (best) BASIC16.12■□□□□ 0.17
SMG8Q8ND04 TMBIM1-201ENST00000258412 2371 ntAPPRIS P1 TSL 1 (best) BASIC16.12■□□□□ 0.17
SMG8Q8ND04 ZBED1P1-201ENST00000502364 1930 ntBASIC16.12■□□□□ 0.17
SMG8Q8ND04 PRICKLE1-211ENST00000639566 3341 ntAPPRIS P1 TSL 5 BASIC16.12■□□□□ 0.17
SMG8Q8ND04 PDE1C-202ENST00000396182 2420 ntTSL 1 (best) BASIC16.12■□□□□ 0.17
SMG8Q8ND04 MRPL55-214ENST00000366741 603 ntAPPRIS P1 TSL 2 BASIC16.12■□□□□ 0.17
SMG8Q8ND04 MRPL55-218ENST00000366747 603 ntAPPRIS P1 TSL 1 (best) BASIC16.12■□□□□ 0.17
SMG8Q8ND04 AC016825.1-201ENST00000433600 778 ntTSL 1 (best) BASIC16.12■□□□□ 0.17
SMG8Q8ND04 GLIS3-AS1-201ENST00000451340 734 ntTSL 1 (best) BASIC16.12■□□□□ 0.17
SMG8Q8ND04 PENK-202ENST00000451791 1029 ntAPPRIS P1 TSL 1 (best) BASIC16.12■□□□□ 0.17
SMG8Q8ND04 RPL18P13-201ENST00000478088 569 ntBASIC16.12■□□□□ 0.17
SMG8Q8ND04 AC129492.3-201ENST00000498285 460 ntAPPRIS P1 TSL 4 BASIC16.12■□□□□ 0.17
SMG8Q8ND04 AC013355.1-201ENST00000562625 723 ntBASIC16.12■□□□□ 0.17
SMG8Q8ND04 AC110285.1-205ENST00000572301 559 ntTSL 3 BASIC16.12■□□□□ 0.17
SMG8Q8ND04 C1QTNF1-AS1-202ENST00000581579 865 ntTSL 1 (best) BASIC16.12■□□□□ 0.17
SMG8Q8ND04 RN7SL163P-201ENST00000583100 276 ntBASIC16.12■□□□□ 0.17
SMG8Q8ND04 AC010323.1-201ENST00000598884 580 ntAPPRIS P1 TSL 4 BASIC16.12■□□□□ 0.17
SMG8Q8ND04 ZNF586-206ENST00000599802 581 ntTSL 3 BASIC16.12■□□□□ 0.17
SMG8Q8ND04 LINC01233-203ENST00000601708 494 ntTSL 3 BASIC16.12■□□□□ 0.17
SMG8Q8ND04 AC234782.2-201ENST00000614615 1240 ntTSL 2 BASIC16.12■□□□□ 0.17
SMG8Q8ND04 ZNFX1-AS1_1.1-201ENST00000615787 198 ntBASIC16.12■□□□□ 0.17
SMG8Q8ND04 TUBB3-215ENST00000625617 570 ntTSL 4 BASIC16.12■□□□□ 0.17
SMG8Q8ND04 TSC1-202ENST00000403810 1507 ntTSL 1 (best) BASIC16.12■□□□□ 0.17
SMG8Q8ND04 WDR1-202ENST00000382451 2722 ntTSL 1 (best) BASIC16.12■□□□□ 0.17
SMG8Q8ND04 MYEF2-201ENST00000267836 2958 ntAPPRIS ALT2 TSL 1 (best) BASIC16.12■□□□□ 0.17
SMG8Q8ND04 GABARAPL1-218ENST00000546017 2294 ntTSL 2 BASIC16.12■□□□□ 0.17
SMG8Q8ND04 AC013726.1-201ENST00000563747 2285 ntBASIC16.12■□□□□ 0.17
SMG8Q8ND04 NR4A1-204ENST00000394825 2528 ntAPPRIS P1 TSL 1 (best) BASIC16.12■□□□□ 0.17
SMG8Q8ND04 SMYD1-203ENST00000444564 1816 ntTSL 5 BASIC16.12■□□□□ 0.17
SMG8Q8ND04 FSD1L-206ENST00000481272 1804 ntTSL 2 BASIC16.12■□□□□ 0.17
SMG8Q8ND04 SPPL2B-207ENST00000610743 2583 ntAPPRIS ALT2 TSL 1 (best) BASIC16.12■□□□□ 0.17
SMG8Q8ND04 MYB-201ENST00000316528 3571 ntTSL 5 BASIC16.12■□□□□ 0.17
SMG8Q8ND04 MYB-241ENST00000616088 3573 ntTSL 5 BASIC16.12■□□□□ 0.17
SMG8Q8ND04 LINC00665-203ENST00000438368 1863 ntTSL 5 BASIC16.12■□□□□ 0.17
SMG8Q8ND04 GCLC-213ENST00000616923 3694 ntTSL 1 (best) BASIC16.12■□□□□ 0.17
SMG8Q8ND04 NFATC4-202ENST00000413692 5700 ntAPPRIS ALT2 TSL 1 (best) BASIC16.12■□□□□ 0.17
SMG8Q8ND04 CIAPIN1-201ENST00000394391 2182 ntAPPRIS P1 TSL 1 (best) BASIC16.11■□□□□ 0.17
SMG8Q8ND04 ALG3-207ENST00000455059 1697 ntTSL 5 BASIC16.11■□□□□ 0.17
SMG8Q8ND04 SRSF5-203ENST00000553521 2815 ntAPPRIS P1 TSL 1 (best) BASIC16.11■□□□□ 0.17
SMG8Q8ND04 PLCD3-212ENST00000619929 6107 ntAPPRIS P1 TSL 1 (best) BASIC16.11■□□□□ 0.17
SMG8Q8ND04 BDP1-202ENST00000380675 2861 ntAPPRIS ALT2 TSL 5 BASIC16.11■□□□□ 0.17
SMG8Q8ND04 AMZ2P1-202ENST00000430983 3425 ntTSL 2 BASIC16.11■□□□□ 0.17
SMG8Q8ND04 ETNPPL-201ENST00000296486 2099 ntAPPRIS P3 TSL 1 (best) BASIC16.11■□□□□ 0.17
SMG8Q8ND04 NRXN1-229ENST00000628515 3243 ntTSL 5 BASIC16.11■□□□□ 0.17
SMG8Q8ND04 NFATC4-203ENST00000422617 5491 ntAPPRIS ALT2 TSL 1 (best) BASIC16.11■□□□□ 0.17
SMG8Q8ND04 PSME1-201ENST00000206451 1006 ntAPPRIS P1 TSL 1 (best) BASIC16.11■□□□□ 0.17
SMG8Q8ND04 MIR663AHG-201ENST00000427348 1213 ntTSL 1 (best) BASIC16.11■□□□□ 0.17
SMG8Q8ND04 VAMP8-203ENST00000432071 664 ntTSL 3 BASIC16.11■□□□□ 0.17
SMG8Q8ND04 KLK11-204ENST00000453757 1174 ntAPPRIS ALT2 TSL 1 (best) BASIC16.11■□□□□ 0.17
SMG8Q8ND04 CICP12-201ENST00000455801 843 ntBASIC16.11■□□□□ 0.17
SMG8Q8ND04 TCEAL4-208ENST00000472484 1273 ntAPPRIS P3 TSL 1 (best) BASIC16.11■□□□□ 0.17
SMG8Q8ND04 RCAN1-212ENST00000492600 935 ntTSL 2 BASIC16.11■□□□□ 0.17
SMG8Q8ND04 AC005920.3-202ENST00000512717 789 ntTSL 3 BASIC16.11■□□□□ 0.17
SMG8Q8ND04 AC125603.3-201ENST00000550742 486 ntTSL 3 BASIC16.11■□□□□ 0.17
SMG8Q8ND04 VPS18-202ENST00000558474 873 ntTSL 3 BASIC16.11■□□□□ 0.17
SMG8Q8ND04 IKZF1-217ENST00000612658 962 ntTSL 1 (best) BASIC16.11■□□□□ 0.17
SMG8Q8ND04 PPA1-206ENST00000625364 644 ntTSL 5 BASIC16.11■□□□□ 0.17
SMG8Q8ND04 RHOT1-203ENST00000358365 3297 ntTSL 1 (best) BASIC16.11■□□□□ 0.17
SMG8Q8ND04 KL-201ENST00000380099 5006 ntAPPRIS P1 TSL 1 (best) BASIC16.11■□□□□ 0.17
SMG8Q8ND04 MAGI3-203ENST00000369615 6508 ntAPPRIS P1 TSL 5 BASIC16.11■□□□□ 0.17
SMG8Q8ND04 THOC6-207ENST00000574549 1300 ntTSL 1 (best) BASIC16.11■□□□□ 0.17
SMG8Q8ND04 AMT-239ENST00000636865 1914 ntTSL 5 BASIC16.11■□□□□ 0.17
SMG8Q8ND04 RGL3-201ENST00000380456 2542 ntAPPRIS P1 TSL 1 (best) BASIC16.11■□□□□ 0.17
SMG8Q8ND04 NDRG1-202ENST00000414097 3755 ntAPPRIS P1 TSL 2 BASIC16.11■□□□□ 0.17
SMG8Q8ND04 TCP10-201ENST00000366827 2250 ntAPPRIS ALT2 TSL 5 BASIC16.11■□□□□ 0.17
SMG8Q8ND04 TRMT2A-202ENST00000403707 2928 ntAPPRIS P3 TSL 1 (best) BASIC16.11■□□□□ 0.17
SMG8Q8ND04 PARD6G-201ENST00000353265 3868 ntAPPRIS P1 TSL 1 (best) BASIC16.11■□□□□ 0.17
SMG8Q8ND04 ARHGEF10-201ENST00000349830 5590 ntAPPRIS P3 TSL 1 (best) BASIC16.11■□□□□ 0.17
SMG8Q8ND04 GTF2H1-203ENST00000453096 2707 ntAPPRIS P1 TSL 2 BASIC16.1■□□□□ 0.17
SMG8Q8ND04 CCNA1-204ENST00000630422 1751 ntAPPRIS P1 TSL 2 BASIC16.1■□□□□ 0.17
SMG8Q8ND04 ADRA2A-201ENST00000280155 3745 ntAPPRIS P1 BASIC16.1■□□□□ 0.17
SMG8Q8ND04 GPR84-201ENST00000267015 1497 ntAPPRIS P1 TSL 1 (best) BASIC16.1■□□□□ 0.17
SMG8Q8ND04 ELAVL1-205ENST00000596459 1473 ntAPPRIS P1 TSL 2 BASIC16.1■□□□□ 0.17
SMG8Q8ND04 JAKMIP1-205ENST00000410077 1835 ntTSL 2 BASIC16.1■□□□□ 0.17
SMG8Q8ND04 FLAD1-201ENST00000292180 2160 ntTSL 1 (best) BASIC16.1■□□□□ 0.17
SMG8Q8ND04 MBD1-211ENST00000585595 2179 ntAPPRIS ALT2 TSL 2 BASIC16.1■□□□□ 0.17
SMG8Q8ND04 RASAL1-207ENST00000548055 2502 ntAPPRIS ALT2 TSL 1 (best) BASIC16.1■□□□□ 0.17
SMG8Q8ND04 TMEM9-204ENST00000367334 1529 ntAPPRIS P3 TSL 1 (best) BASIC16.1■□□□□ 0.17
SMG8Q8ND04 TMEM97-201ENST00000226230 2568 ntAPPRIS P1 TSL 1 (best) BASIC16.1■□□□□ 0.17
SMG8Q8ND04 MAPK3-212ENST00000484663 2567 ntTSL 1 (best) BASIC16.1■□□□□ 0.17
SMG8Q8ND04 TRPC6-206ENST00000532133 2648 ntTSL 5 BASIC16.1■□□□□ 0.17
SMG8Q8ND04 ILF3-210ENST00000588657 2697 ntAPPRIS ALT2 TSL 5 BASIC16.1■□□□□ 0.17
SMG8Q8ND04 OGFOD2-202ENST00000397389 2308 ntTSL 2 BASIC16.1■□□□□ 0.17
SMG8Q8ND04 RSPO1-202ENST00000401068 2320 ntAPPRIS P1 TSL 1 (best) BASIC16.1■□□□□ 0.17
SMG8Q8ND04 M6PR-202ENST00000536844 2305 ntTSL 3 BASIC16.1■□□□□ 0.17
SMG8Q8ND04 CCDC59-201ENST00000256151 1983 ntAPPRIS P1 TSL 1 (best) BASIC16.1■□□□□ 0.17
SMG8Q8ND04 MRPS12-201ENST00000308018 1207 ntAPPRIS P1 TSL 1 (best) BASIC16.1■□□□□ 0.17
SMG8Q8ND04 RPL13A-201ENST00000391857 1181 ntAPPRIS P1 TSL 1 (best) BASIC16.1■□□□□ 0.17
SMG8Q8ND04 SMARCE1-204ENST00000400122 1263 ntTSL 1 (best) BASIC16.1■□□□□ 0.17
SMG8Q8ND04 AC007731.4-201ENST00000420225 652 ntTSL 2 BASIC16.1■□□□□ 0.17
SMG8Q8ND04 AC127070.2-201ENST00000424075 555 ntTSL 2 BASIC16.1■□□□□ 0.17
SMG8Q8ND04 AL157373.2-201ENST00000437559 784 ntTSL 3 BASIC16.1■□□□□ 0.17
SMG8Q8ND04 OARD1-204ENST00000464633 717 ntTSL 2 BASIC16.1■□□□□ 0.17
SMG8Q8ND04 AC106794.1-201ENST00000506935 792 ntBASIC16.1■□□□□ 0.17
SMG8Q8ND04 ERICH5-202ENST00000545282 596 ntAPPRIS ALT2 TSL 2 BASIC16.1■□□□□ 0.17
SMG8Q8ND04 LINC02205-201ENST00000559752 239 ntTSL 5 BASIC16.1■□□□□ 0.17
SMG8Q8ND04 AC104758.2-201ENST00000562716 483 ntTSL 3 BASIC16.1■□□□□ 0.17
SMG8Q8ND04 MT1H-202ENST00000569155 697 ntTSL 1 (best) BASIC16.1■□□□□ 0.17
SMG8Q8ND04 RN7SL774P-201ENST00000577467 290 ntBASIC16.1■□□□□ 0.17
SMG8Q8ND04 SMARCE1-213ENST00000578044 1184 ntTSL 1 (best) BASIC16.1■□□□□ 0.17
Retrieved 100 of 98,524 protein–RNA pairs in 133.2 ms