Protein–RNA interactions for Protein: Q8N3V7

SYNPO, Synaptopodin, humanhuman

Predictions only

Length 929 aa.

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Protein RNA Prediction (catRAPID) Interaction (ENCODE eCLIP)
Gene UniProt Accession Transcript Symbol Ensembl Transcript ID Length Transcript Status Prediction Score Prediction z-Score p-Value Fold Change
SYNPOQ8N3V7 UBL7-AS1-203ENST00000564621 1612 ntTSL 1 (best) BASIC15.28■□□□□ 0.04
SYNPOQ8N3V7 EIF2S2-201ENST00000374980 2656 ntAPPRIS P1 TSL 1 (best) BASIC15.28■□□□□ 0.04
SYNPOQ8N3V7 EPS15L1-207ENST00000594975 2489 ntTSL 2 BASIC15.27■□□□□ 0.04
SYNPOQ8N3V7 SLC38A5-213ENST00000620913 1993 ntAPPRIS P1 TSL 5 BASIC15.27■□□□□ 0.04
SYNPOQ8N3V7 ZBTB45P1-201ENST00000452761 1456 ntBASIC15.27■□□□□ 0.04
SYNPOQ8N3V7 GPBAR1-203ENST00000521462 1465 ntAPPRIS P1 TSL 2 BASIC15.27■□□□□ 0.04
SYNPOQ8N3V7 PDE1B-201ENST00000243052 3444 ntAPPRIS P1 TSL 1 (best) BASIC15.27■□□□□ 0.04
SYNPOQ8N3V7 DIRAS2-201ENST00000375765 4386 ntAPPRIS P1 TSL 1 (best) BASIC15.27■□□□□ 0.04
SYNPOQ8N3V7 TMEM40-202ENST00000314124 2308 ntAPPRIS P3 TSL 2 BASIC15.27■□□□□ 0.04
SYNPOQ8N3V7 GRID2IP-201ENST00000435185 3215 ntTSL 5 BASIC15.27■□□□□ 0.04
SYNPOQ8N3V7 SYN1-202ENST00000340666 3172 ntAPPRIS ALT2 TSL 1 (best) BASIC15.27■□□□□ 0.04
SYNPOQ8N3V7 GRAMD2B-217ENST00000515200 3109 ntTSL 5 BASIC15.27■□□□□ 0.04
SYNPOQ8N3V7 APP-204ENST00000357903 3543 ntAPPRIS ALT2 TSL 1 (best) BASIC15.27■□□□□ 0.04
SYNPOQ8N3V7 ARHGAP9-203ENST00000424809 2569 ntTSL 2 BASIC15.27■□□□□ 0.04
SYNPOQ8N3V7 RHOXF1-201ENST00000217999 769 ntAPPRIS P1 TSL 1 (best) BASIC15.27■□□□□ 0.04
SYNPOQ8N3V7 OR1J1-201ENST00000259357 969 ntAPPRIS P1 BASIC15.27■□□□□ 0.04
SYNPOQ8N3V7 NDUFB8-201ENST00000299166 671 ntAPPRIS P1 TSL 1 (best) BASIC15.27■□□□□ 0.04
SYNPOQ8N3V7 LCK-206ENST00000373564 2137 ntTSL 5 BASIC15.27■□□□□ 0.04
SYNPOQ8N3V7 RN7SKP175-201ENST00000408472 289 ntBASIC15.27■□□□□ 0.04
SYNPOQ8N3V7 TMEM177-203ENST00000409951 1216 ntTSL 1 (best) BASIC15.27■□□□□ 0.04
SYNPOQ8N3V7 ACTG1P2-201ENST00000415776 1125 ntBASIC15.27■□□□□ 0.04
SYNPOQ8N3V7 ACTG1P11-201ENST00000425411 1125 ntBASIC15.27■□□□□ 0.04
SYNPOQ8N3V7 VAMP8-203ENST00000432071 664 ntTSL 3 BASIC15.27■□□□□ 0.04
SYNPOQ8N3V7 AP000356.1-201ENST00000438893 364 ntTSL 3 BASIC15.27■□□□□ 0.04
SYNPOQ8N3V7 ARMCX3-AS1-201ENST00000454228 490 ntTSL 3 BASIC15.27■□□□□ 0.04
SYNPOQ8N3V7 AC091390.4-201ENST00000484974 491 ntTSL 3 BASIC15.27■□□□□ 0.04
SYNPOQ8N3V7 AP003065.1-201ENST00000540912 562 ntTSL 4 BASIC15.27■□□□□ 0.04
SYNPOQ8N3V7 CD63-214ENST00000552692 949 ntAPPRIS P1 TSL 1 (best) BASIC15.27■□□□□ 0.04
SYNPOQ8N3V7 AL132642.1-201ENST00000557646 553 ntTSL 4 BASIC15.27■□□□□ 0.04
SYNPOQ8N3V7 DUX4L46-201ENST00000566845 751 ntBASIC15.27■□□□□ 0.04
SYNPOQ8N3V7 LINC01229-204ENST00000568751 720 ntTSL 3 BASIC15.27■□□□□ 0.04
SYNPOQ8N3V7 AC008736.2-201ENST00000587554 516 ntTSL 2 BASIC15.27■□□□□ 0.04
SYNPOQ8N3V7 NEAT1-203ENST00000601801 487 ntTSL 4 BASIC15.27■□□□□ 0.04
SYNPOQ8N3V7 AC008825.2-201ENST00000603374 718 ntBASIC15.27■□□□□ 0.04
SYNPOQ8N3V7 AL358472.3-201ENST00000608147 415 ntBASIC15.27■□□□□ 0.04
SYNPOQ8N3V7 AP000346.4-201ENST00000614827 381 ntBASIC15.27■□□□□ 0.04
SYNPOQ8N3V7 AC068790.8-201ENST00000618862 504 ntAPPRIS P1 TSL 3 BASIC15.27■□□□□ 0.04
SYNPOQ8N3V7 AC002472.3-201ENST00000640124 621 ntBASIC15.27■□□□□ 0.04
SYNPOQ8N3V7 CCDC140-201ENST00000295226 1699 ntAPPRIS P2 TSL 1 (best) BASIC15.27■□□□□ 0.03
SYNPOQ8N3V7 SEC14L4-204ENST00000381982 1603 ntTSL 1 (best) BASIC15.27■□□□□ 0.03
SYNPOQ8N3V7 SIKE1-203ENST00000369528 5506 ntAPPRIS ALT1 TSL 1 (best) BASIC15.27■□□□□ 0.03
SYNPOQ8N3V7 CDK18-201ENST00000360066 3141 ntAPPRIS P1 TSL 1 (best) BASIC15.27■□□□□ 0.03
SYNPOQ8N3V7 SMARCD2-202ENST00000323347 1935 ntTSL 2 BASIC15.27■□□□□ 0.03
SYNPOQ8N3V7 KITLG-202ENST00000347404 1948 ntTSL 1 (best) BASIC15.27■□□□□ 0.03
SYNPOQ8N3V7 TMEM9-204ENST00000367334 1529 ntAPPRIS P3 TSL 1 (best) BASIC15.27■□□□□ 0.03
SYNPOQ8N3V7 NBPF15-202ENST00000488031 4535 ntAPPRIS P1 TSL 5 BASIC15.27■□□□□ 0.03
SYNPOQ8N3V7 SLIT3-201ENST00000332966 4895 ntAPPRIS ALT2 TSL 1 (best) BASIC15.27■□□□□ 0.03
SYNPOQ8N3V7 BRMS1-201ENST00000359957 1445 ntAPPRIS P1 TSL 1 (best) BASIC15.26■□□□□ 0.03
SYNPOQ8N3V7 TOPAZ1-201ENST00000309765 5334 ntAPPRIS P1 TSL 5 BASIC15.26■□□□□ 0.03
SYNPOQ8N3V7 HMGA1-202ENST00000347617 1773 ntAPPRIS ALT1 TSL 1 (best) BASIC15.26■□□□□ 0.03
SYNPOQ8N3V7 GLUD2-201ENST00000328078 2493 ntAPPRIS P1 BASIC15.26■□□□□ 0.03
SYNPOQ8N3V7 LENG8-209ENST00000616932 2825 ntAPPRIS ALT2 TSL 5 BASIC15.26■□□□□ 0.03
SYNPOQ8N3V7 GRB7-204ENST00000394211 2093 ntAPPRIS P1 TSL 1 (best) BASIC15.26■□□□□ 0.03
SYNPOQ8N3V7 GHRLOS-201ENST00000439539 1708 ntTSL 1 (best) BASIC15.26■□□□□ 0.03
SYNPOQ8N3V7 SYNRG-222ENST00000614941 3406 ntTSL 1 (best) BASIC15.26■□□□□ 0.03
SYNPOQ8N3V7 CKAP4-201ENST00000378026 3093 ntAPPRIS P1 TSL 1 (best) BASIC15.26■□□□□ 0.03
SYNPOQ8N3V7 STAT1-202ENST00000392322 2716 ntAPPRIS ALT1 TSL 1 (best) BASIC15.26■□□□□ 0.03
SYNPOQ8N3V7 NOTO-201ENST00000398468 2749 ntAPPRIS P1 TSL 2 BASIC15.26■□□□□ 0.03
SYNPOQ8N3V7 AFAP1L2-202ENST00000369271 3964 ntAPPRIS ALT2 TSL 1 (best) BASIC15.26■□□□□ 0.03
SYNPOQ8N3V7 CXorf40B-202ENST00000370404 1316 ntAPPRIS P2 TSL 2 BASIC15.26■□□□□ 0.03
SYNPOQ8N3V7 AURKC-203ENST00000448930 1318 ntAPPRIS ALT2 TSL 5 BASIC15.26■□□□□ 0.03
SYNPOQ8N3V7 EIF1B-AS1-201ENST00000625390 1958 ntTSL 1 (best) BASIC15.26■□□□□ 0.03
SYNPOQ8N3V7 CES4A-207ENST00000540947 2284 ntAPPRIS P2 TSL 2 BASIC15.26■□□□□ 0.03
SYNPOQ8N3V7 SLC30A1-201ENST00000367001 5474 ntAPPRIS P1 TSL 1 (best) BASIC15.26■□□□□ 0.03
SYNPOQ8N3V7 ZNF767P-201ENST00000463567 3520 ntTSL 2 BASIC15.26■□□□□ 0.03
SYNPOQ8N3V7 SPDYE4-201ENST00000328794 923 ntAPPRIS P1 TSL 1 (best) BASIC15.26■□□□□ 0.03
SYNPOQ8N3V7 RN7SKP214-201ENST00000364208 315 ntBASIC15.26■□□□□ 0.03
SYNPOQ8N3V7 RBM38-204ENST00000371219 760 ntTSL 2 BASIC15.26■□□□□ 0.03
SYNPOQ8N3V7 FGF14-202ENST00000376143 744 ntAPPRIS P1 TSL 1 (best) BASIC15.26■□□□□ 0.03
SYNPOQ8N3V7 PEX13-203ENST00000414712 1014 ntTSL 1 (best) BASIC15.26■□□□□ 0.03
SYNPOQ8N3V7 LIMS1-206ENST00000414829 439 ntTSL 1 (best) BASIC15.26■□□□□ 0.03
SYNPOQ8N3V7 AL160290.2-202ENST00000448671 574 ntTSL 3 BASIC15.26■□□□□ 0.03
SYNPOQ8N3V7 ATP6V1G2-210ENST00000483251 662 ntTSL 3 BASIC15.26■□□□□ 0.03
SYNPOQ8N3V7 LIMS3-205ENST00000487150 782 ntTSL 3 BASIC15.26■□□□□ 0.03
SYNPOQ8N3V7 GUSBP1-202ENST00000508260 1012 ntTSL 2 BASIC15.26■□□□□ 0.03
SYNPOQ8N3V7 ADIG-204ENST00000537425 770 ntAPPRIS P1 TSL 1 (best) BASIC15.26■□□□□ 0.03
SYNPOQ8N3V7 AL133499.1-201ENST00000596207 608 ntBASIC15.26■□□□□ 0.03
SYNPOQ8N3V7 AL132994.2-201ENST00000603120 687 ntBASIC15.26■□□□□ 0.03
SYNPOQ8N3V7 AP001043.1-205ENST00000623098 1033 ntTSL 5 BASIC15.26■□□□□ 0.03
SYNPOQ8N3V7 FAM131B-206ENST00000443739 4382 ntAPPRIS ALT1 TSL 1 (best) BASIC15.26■□□□□ 0.03
SYNPOQ8N3V7 STXBP5-207ENST00000546097 2160 ntTSL 1 (best) BASIC15.26■□□□□ 0.03
SYNPOQ8N3V7 DBET-201ENST00000630918 3363 ntBASIC15.26■□□□□ 0.03
SYNPOQ8N3V7 FSD1L-206ENST00000481272 1804 ntTSL 2 BASIC15.26■□□□□ 0.03
SYNPOQ8N3V7 LDLR-204ENST00000545707 2429 ntTSL 2 BASIC15.26■□□□□ 0.03
SYNPOQ8N3V7 NECAP2-201ENST00000337132 2070 ntAPPRIS P1 TSL 1 (best) BASIC15.26■□□□□ 0.03
SYNPOQ8N3V7 MAGEA12-202ENST00000393869 1761 ntAPPRIS P1 TSL 2 BASIC15.26■□□□□ 0.03
SYNPOQ8N3V7 PLEKHB2-207ENST00000438882 1460 ntTSL 2 BASIC15.26■□□□□ 0.03
SYNPOQ8N3V7 AC007326.2-201ENST00000624224 7579 ntBASIC15.26■□□□□ 0.03
SYNPOQ8N3V7 MAGEA1-201ENST00000356661 1710 ntAPPRIS P1 TSL 1 (best) BASIC15.26■□□□□ 0.03
SYNPOQ8N3V7 SHC1P1-201ENST00000425230 1745 ntBASIC15.26■□□□□ 0.03
SYNPOQ8N3V7 ADRA2A-201ENST00000280155 3745 ntAPPRIS P1 BASIC15.26■□□□□ 0.03
SYNPOQ8N3V7 CCDC136-212ENST00000487361 2268 ntAPPRIS ALT2 TSL 5 BASIC15.26■□□□□ 0.03
SYNPOQ8N3V7 HDAC5-201ENST00000225983 5326 ntAPPRIS P3 TSL 5 BASIC15.25■□□□□ 0.03
SYNPOQ8N3V7 CUX1-213ENST00000549414 4452 ntAPPRIS ALT2 TSL 5 BASIC15.25■□□□□ 0.03
SYNPOQ8N3V7 SH3BP4-201ENST00000344528 5044 ntAPPRIS P1 TSL 1 (best) BASIC15.25■□□□□ 0.03
SYNPOQ8N3V7 PCDHA3-201ENST00000522353 5260 ntAPPRIS P1 TSL 1 (best) BASIC15.25■□□□□ 0.03
SYNPOQ8N3V7 FBN2-205ENST00000508989 4987 ntTSL 2 BASIC15.25■□□□□ 0.03
SYNPOQ8N3V7 DNAJC2-203ENST00000379263 2167 ntAPPRIS P1 TSL 1 (best) BASIC15.25■□□□□ 0.03
SYNPOQ8N3V7 C5orf24-204ENST00000504727 2923 ntTSL 1 (best) BASIC15.25■□□□□ 0.03
SYNPOQ8N3V7 TLE3-215ENST00000559048 2918 ntTSL 2 BASIC15.25■□□□□ 0.03
Retrieved 100 of 98,524 protein–RNA pairs in 31.1 ms