Protein–RNA interactions for Protein: Q6P9F0

CCDC62, Coiled-coil domain-containing protein 62, humanhuman

Predictions only

Length 684 aa.

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Protein RNA Prediction (catRAPID) Interaction (ENCODE eCLIP)
Gene UniProt Accession Transcript Symbol Ensembl Transcript ID Length Transcript Status Prediction Score Prediction z-Score p-Value Fold Change
CCDC62Q6P9F0 SSTR5-AS1-201ENST00000565992 575 ntTSL 4 BASIC16.91■□□□□ 0.3
CCDC62Q6P9F0 AC009955.4-201ENST00000597192 544 ntBASIC16.91■□□□□ 0.3
CCDC62Q6P9F0 BNIP3P13-201ENST00000599968 566 ntBASIC16.91■□□□□ 0.3
CCDC62Q6P9F0 AC138649.2-201ENST00000615886 705 ntBASIC16.91■□□□□ 0.3
CCDC62Q6P9F0 AL162426.1-201ENST00000624141 743 ntBASIC16.91■□□□□ 0.3
CCDC62Q6P9F0 TUBB3-215ENST00000625617 570 ntTSL 4 BASIC16.91■□□□□ 0.3
CCDC62Q6P9F0 PHACTR3-204ENST00000371015 2728 ntAPPRIS P1 TSL 1 (best) BASIC16.91■□□□□ 0.3
CCDC62Q6P9F0 NR1H3-235ENST00000616973 1919 ntTSL 1 (best) BASIC16.91■□□□□ 0.3
CCDC62Q6P9F0 TUBB4A-201ENST00000264071 2552 ntAPPRIS P1 TSL 1 (best) BASIC16.91■□□□□ 0.3
CCDC62Q6P9F0 SPG21-203ENST00000433215 1613 ntAPPRIS P1 TSL 1 (best) BASIC16.91■□□□□ 0.3
CCDC62Q6P9F0 TUBBP5-203ENST00000508529 1334 ntBASIC16.91■□□□□ 0.3
CCDC62Q6P9F0 NRCAM-217ENST00000613830 3025 ntTSL 1 (best) BASIC16.91■□□□□ 0.3
CCDC62Q6P9F0 PITPNM2-202ENST00000320201 6736 ntAPPRIS P3 TSL 5 BASIC16.91■□□□□ 0.3
CCDC62Q6P9F0 HLA-DQB2-231ENST00000435145 2026 ntBASIC16.91■□□□□ 0.3
CCDC62Q6P9F0 GNB2-202ENST00000393924 1524 ntAPPRIS P1 TSL 1 (best) BASIC16.91■□□□□ 0.3
CCDC62Q6P9F0 AC011840.2-201ENST00000563063 1520 ntBASIC16.91■□□□□ 0.3
CCDC62Q6P9F0 GSDMA-203ENST00000635792 1546 ntAPPRIS P1 TSL 5 BASIC16.91■□□□□ 0.3
CCDC62Q6P9F0 PDK2-201ENST00000007708 2384 ntTSL 2 BASIC16.91■□□□□ 0.3
CCDC62Q6P9F0 HENMT1-202ENST00000370032 1874 ntAPPRIS P2 TSL 1 (best) BASIC16.9■□□□□ 0.3
CCDC62Q6P9F0 GOLGA8M-201ENST00000563027 1899 ntAPPRIS P1 TSL 5 BASIC16.9■□□□□ 0.3
CCDC62Q6P9F0 TCF25-201ENST00000263346 2233 ntAPPRIS P1 TSL 1 (best) BASIC16.9■□□□□ 0.3
CCDC62Q6P9F0 TRIM24-202ENST00000415680 3799 ntAPPRIS ALT2 TSL 1 (best) BASIC16.9■□□□□ 0.3
CCDC62Q6P9F0 GRAMD2B-217ENST00000515200 3109 ntTSL 5 BASIC16.9■□□□□ 0.3
CCDC62Q6P9F0 CEP170B-203ENST00000453495 6813 ntAPPRIS ALT2 TSL 5 BASIC16.9■□□□□ 0.3
CCDC62Q6P9F0 CCNA1-204ENST00000630422 1751 ntAPPRIS P1 TSL 2 BASIC16.9■□□□□ 0.3
CCDC62Q6P9F0 CHAT-212ENST00000640822 1412 ntTSL 5 BASIC16.9■□□□□ 0.3
CCDC62Q6P9F0 FYN-205ENST00000368682 3234 ntAPPRIS ALT1 TSL 5 BASIC16.9■□□□□ 0.3
CCDC62Q6P9F0 RDH5-201ENST00000257895 1269 ntAPPRIS P1 TSL 1 (best) BASIC16.9■□□□□ 0.3
CCDC62Q6P9F0 MRPL23-204ENST00000397297 613 ntTSL 2 BASIC16.9■□□□□ 0.3
CCDC62Q6P9F0 SMARCE1-204ENST00000400122 1263 ntTSL 1 (best) BASIC16.9■□□□□ 0.3
CCDC62Q6P9F0 EIF4HP1-201ENST00000453115 687 ntBASIC16.9■□□□□ 0.3
CCDC62Q6P9F0 PRSS30P-202ENST00000475030 752 ntTSL 1 (best) BASIC16.9■□□□□ 0.3
CCDC62Q6P9F0 AC129492.3-201ENST00000498285 460 ntAPPRIS P1 TSL 4 BASIC16.9■□□□□ 0.3
CCDC62Q6P9F0 ANO1-AS1-201ENST00000524987 646 ntTSL 3 BASIC16.9■□□□□ 0.3
CCDC62Q6P9F0 AL136309.4-201ENST00000527831 640 ntTSL 1 (best) BASIC16.9■□□□□ 0.3
CCDC62Q6P9F0 RDH5-204ENST00000548082 1259 ntAPPRIS P1 TSL 1 (best) BASIC16.9■□□□□ 0.3
CCDC62Q6P9F0 ERH-203ENST00000557016 1124 ntAPPRIS P1 TSL 1 (best) BASIC16.9■□□□□ 0.3
CCDC62Q6P9F0 SMARCE1-213ENST00000578044 1184 ntTSL 1 (best) BASIC16.9■□□□□ 0.3
CCDC62Q6P9F0 SMARCE1-216ENST00000580419 1228 ntTSL 1 (best) BASIC16.9■□□□□ 0.3
CCDC62Q6P9F0 ZNFX1-AS1_1.1-201ENST00000615787 198 ntBASIC16.9■□□□□ 0.3
CCDC62Q6P9F0 AC002472.3-201ENST00000640124 621 ntBASIC16.9■□□□□ 0.3
CCDC62Q6P9F0 CNN1-210ENST00000592923 1848 ntTSL 2 BASIC16.9■□□□□ 0.3
CCDC62Q6P9F0 DEPDC5-203ENST00000400242 2395 ntTSL 1 (best) BASIC16.9■□□□□ 0.3
CCDC62Q6P9F0 MXI1-202ENST00000332674 3470 ntAPPRIS P4 TSL 1 (best) BASIC16.9■□□□□ 0.3
CCDC62Q6P9F0 ANKS6-202ENST00000375019 2586 ntTSL 5 BASIC16.9■□□□□ 0.3
CCDC62Q6P9F0 API5-202ENST00000420461 2009 ntTSL 2 BASIC16.9■□□□□ 0.3
CCDC62Q6P9F0 MFSD5-202ENST00000534842 2038 ntTSL 2 BASIC16.9■□□□□ 0.3
CCDC62Q6P9F0 AL354813.1-201ENST00000526566 2437 ntTSL 5 BASIC16.9■□□□□ 0.3
CCDC62Q6P9F0 AC020910.5-201ENST00000623668 1865 ntBASIC16.9■□□□□ 0.3
CCDC62Q6P9F0 HNRNPLL-212ENST00000608859 3035 ntTSL 5 BASIC16.9■□□□□ 0.3
CCDC62Q6P9F0 AL138725.1-201ENST00000407347 1314 ntBASIC16.9■□□□□ 0.3
CCDC62Q6P9F0 TMEM127-201ENST00000258439 6266 ntAPPRIS P1 TSL 1 (best) BASIC16.9■□□□□ 0.3
CCDC62Q6P9F0 TMEM184C-204ENST00000508208 1528 ntTSL 1 (best) BASIC16.9■□□□□ 0.3
CCDC62Q6P9F0 SARM1-208ENST00000585482 10309 ntAPPRIS P1 TSL 1 (best) BASIC16.9■□□□□ 0.3
CCDC62Q6P9F0 KANK2-201ENST00000586659 5162 ntAPPRIS P3 TSL 1 (best) BASIC16.9■□□□□ 0.3
CCDC62Q6P9F0 AC010424.3-201ENST00000635510 1745 ntTSL 5 BASIC16.9■□□□□ 0.3
CCDC62Q6P9F0 UPB1-202ENST00000382760 1928 ntTSL 5 BASIC16.9■□□□□ 0.3
CCDC62Q6P9F0 CACNA1I-203ENST00000404898 9892 ntAPPRIS ALT2 TSL 1 (best) BASIC16.9■□□□□ 0.3
CCDC62Q6P9F0 PIK3CD-206ENST00000536656 5483 ntTSL 5 BASIC16.9■□□□□ 0.3
CCDC62Q6P9F0 PIK3CD-208ENST00000628140 5483 ntTSL 5 BASIC16.9■□□□□ 0.3
CCDC62Q6P9F0 CTNND2-214ENST00000511377 4336 ntTSL 1 (best) BASIC16.89■□□□□ 0.3
CCDC62Q6P9F0 ZMYND10-202ENST00000360165 1757 ntAPPRIS ALT1 TSL 1 (best) BASIC16.89■□□□□ 0.3
CCDC62Q6P9F0 AC112693.3-201ENST00000624819 1983 ntBASIC16.89■□□□□ 0.3
CCDC62Q6P9F0 HNRNPF-201ENST00000337970 2186 ntAPPRIS P1 TSL 1 (best) BASIC16.89■□□□□ 0.3
CCDC62Q6P9F0 NSMF-205ENST00000371474 3571 ntAPPRIS ALT1 TSL 1 (best) BASIC16.89■□□□□ 0.3
CCDC62Q6P9F0 NSMF-208ENST00000437259 3577 ntAPPRIS ALT1 TSL 5 BASIC16.89■□□□□ 0.3
CCDC62Q6P9F0 MCM4-201ENST00000262105 4183 ntAPPRIS P1 TSL 1 (best) BASIC16.89■□□□□ 0.3
CCDC62Q6P9F0 AC007326.2-201ENST00000624224 7579 ntBASIC16.89■□□□□ 0.3
CCDC62Q6P9F0 NIN-203ENST00000382041 6496 ntTSL 1 (best) BASIC16.89■□□□□ 0.29
CCDC62Q6P9F0 VRK3-207ENST00000594092 1831 ntAPPRIS ALT2 TSL 1 (best) BASIC16.89■□□□□ 0.29
CCDC62Q6P9F0 AKR1B15-202ENST00000457545 1621 ntAPPRIS P1 TSL 5 BASIC16.89■□□□□ 0.29
CCDC62Q6P9F0 LINC01667-202ENST00000623919 1422 ntTSL 5 BASIC16.89■□□□□ 0.29
CCDC62Q6P9F0 ALG12-201ENST00000330817 5350 ntAPPRIS P1 TSL 1 (best) BASIC16.89■□□□□ 0.29
CCDC62Q6P9F0 IQCE-203ENST00000402050 6844 ntAPPRIS P3 TSL 1 (best) BASIC16.89■□□□□ 0.29
CCDC62Q6P9F0 ZCCHC18-203ENST00000537356 2907 ntAPPRIS P1 TSL 5 BASIC16.89■□□□□ 0.29
CCDC62Q6P9F0 ATE1-209ENST00000543447 4826 ntTSL 2 BASIC16.89■□□□□ 0.29
CCDC62Q6P9F0 CCDC121-202ENST00000394775 1472 ntAPPRIS ALT2 TSL 1 (best) BASIC16.89■□□□□ 0.29
CCDC62Q6P9F0 MPV17-201ENST00000233545 998 ntAPPRIS P1 TSL 1 (best) BASIC16.89■□□□□ 0.29
CCDC62Q6P9F0 FRMD3-202ENST00000328788 964 ntTSL 1 (best) BASIC16.89■□□□□ 0.29
CCDC62Q6P9F0 TRIM27-202ENST00000377199 2967 ntAPPRIS P1 TSL 1 (best) BASIC16.89■□□□□ 0.29
CCDC62Q6P9F0 CYP46A4P-201ENST00000414953 267 ntBASIC16.89■□□□□ 0.29
CCDC62Q6P9F0 DEF8-202ENST00000418391 852 ntTSL 2 BASIC16.89■□□□□ 0.29
CCDC62Q6P9F0 AL157392.3-216ENST00000437446 462 ntTSL 3 BASIC16.89■□□□□ 0.29
CCDC62Q6P9F0 PRSS50-201ENST00000460241 2960 ntAPPRIS P1 TSL 2 BASIC16.89■□□□□ 0.29
CCDC62Q6P9F0 CDC23-208ENST00000505120 455 ntTSL 3 BASIC16.89■□□□□ 0.29
CCDC62Q6P9F0 RCE1-204ENST00000525356 1270 ntTSL 5 BASIC16.89■□□□□ 0.29
CCDC62Q6P9F0 CHMP4BP1-201ENST00000556017 588 ntBASIC16.89■□□□□ 0.29
CCDC62Q6P9F0 AP000845.1-201ENST00000581677 2131 ntBASIC16.89■□□□□ 0.29
CCDC62Q6P9F0 AC005324.6-201ENST00000587972 613 ntBASIC16.89■□□□□ 0.29
CCDC62Q6P9F0 AL645939.5-201ENST00000606834 243 ntBASIC16.89■□□□□ 0.29
CCDC62Q6P9F0 AL136301.1-201ENST00000615830 422 ntBASIC16.89■□□□□ 0.29
CCDC62Q6P9F0 ELOA3C-201ENST00000620688 1218 ntAPPRIS P1 BASIC16.89■□□□□ 0.29
CCDC62Q6P9F0 NLE1-202ENST00000442241 2588 ntAPPRIS P1 TSL 1 (best) BASIC16.89■□□□□ 0.29
CCDC62Q6P9F0 LMF2-202ENST00000474879 2582 ntAPPRIS P1 TSL 1 (best) BASIC16.89■□□□□ 0.29
CCDC62Q6P9F0 TINF2-202ENST00000399423 2168 ntAPPRIS ALT2 TSL 1 (best) BASIC16.89■□□□□ 0.29
CCDC62Q6P9F0 AC136759.1-203ENST00000527477 2196 ntTSL 1 (best) BASIC16.89■□□□□ 0.29
CCDC62Q6P9F0 EML3-202ENST00000394773 3256 ntAPPRIS P2 TSL 1 (best) BASIC16.89■□□□□ 0.29
CCDC62Q6P9F0 FBLN1-202ENST00000327858 2896 ntAPPRIS P1 TSL 1 (best) BASIC16.89■□□□□ 0.29
CCDC62Q6P9F0 ADCYAP1R1-204ENST00000409489 1761 ntTSL 5 BASIC16.89■□□□□ 0.29
CCDC62Q6P9F0 MCF2L-232ENST00000535094 3752 ntAPPRIS ALT2 TSL 2 BASIC16.89■□□□□ 0.29
Retrieved 100 of 98,524 protein–RNA pairs in 51 ms