Protein–RNA interactions for Protein: P55160

NCKAP1L, Nck-associated protein 1-like, humanhuman

Predictions only

Length 1,127 aa.

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Protein RNA Prediction (catRAPID) Interaction (ENCODE eCLIP)
Gene UniProt Accession Transcript Symbol Ensembl Transcript ID Length Transcript Status Prediction Score Prediction z-Score p-Value Fold Change
NCKAP1LP55160 A1BG-AS1-204ENST00000595302 2130 ntTSL 2 BASIC16.45■□□□□ 0.22
NCKAP1LP55160 CLIC6-202ENST00000360731 3860 ntAPPRIS ALT2 TSL 1 (best) BASIC16.45■□□□□ 0.22
NCKAP1LP55160 KLHL42-201ENST00000381271 6703 ntAPPRIS P1 TSL 1 (best) BASIC16.45■□□□□ 0.22
NCKAP1LP55160 PHF19-203ENST00000419155 3525 ntTSL 2 BASIC16.45■□□□□ 0.22
NCKAP1LP55160 LGALS2-201ENST00000215886 591 ntAPPRIS P1 TSL 1 (best) BASIC16.45■□□□□ 0.22
NCKAP1LP55160 NOL4L-202ENST00000326071 701 ntTSL 1 (best) BASIC16.45■□□□□ 0.22
NCKAP1LP55160 CKLF-203ENST00000351137 508 ntAPPRIS ALT2 TSL 1 (best) BASIC16.45■□□□□ 0.22
NCKAP1LP55160 SPDYE7P-201ENST00000355920 1064 ntTSL 1 (best) BASIC16.45■□□□□ 0.22
NCKAP1LP55160 LCE1E-202ENST00000368771 575 ntAPPRIS P2 TSL 3 BASIC16.45■□□□□ 0.22
NCKAP1LP55160 C9orf16-201ENST00000372994 713 ntAPPRIS P1 TSL 1 (best) BASIC16.45■□□□□ 0.22
NCKAP1LP55160 IGHV3-35-201ENST00000390617 366 ntAPPRIS P1 BASIC16.45■□□□□ 0.22
NCKAP1LP55160 MASP2-202ENST00000400898 726 ntTSL 1 (best) BASIC16.45■□□□□ 0.22
NCKAP1LP55160 AC092614.1-201ENST00000419640 909 ntTSL 3 BASIC16.45■□□□□ 0.22
NCKAP1LP55160 LINC02158-201ENST00000432377 897 ntTSL 1 (best) BASIC16.45■□□□□ 0.22
NCKAP1LP55160 SYNPR-202ENST00000450542 1004 ntTSL 1 (best) BASIC16.45■□□□□ 0.22
NCKAP1LP55160 RNF216P1-213ENST00000494947 946 ntTSL 2 BASIC16.45■□□□□ 0.22
NCKAP1LP55160 AP001790.1-201ENST00000511947 570 ntTSL 4 BASIC16.45■□□□□ 0.22
NCKAP1LP55160 C8orf37-AS1-202ENST00000517655 562 ntTSL 4 BASIC16.45■□□□□ 0.22
NCKAP1LP55160 AC023310.1-201ENST00000554836 735 ntBASIC16.45■□□□□ 0.22
NCKAP1LP55160 DMAC2-208ENST00000589970 979 ntTSL 2 BASIC16.45■□□□□ 0.22
NCKAP1LP55160 YIF1B-215ENST00000592246 936 ntTSL 3 BASIC16.45■□□□□ 0.22
NCKAP1LP55160 AC025048.1-201ENST00000592317 542 ntTSL 4 BASIC16.45■□□□□ 0.22
NCKAP1LP55160 TXNL4A-212ENST00000592957 546 ntTSL 3 BASIC16.45■□□□□ 0.22
NCKAP1LP55160 DMAC2-215ENST00000597457 492 ntTSL 5 BASIC16.45■□□□□ 0.22
NCKAP1LP55160 LINC01002-220ENST00000632790 449 ntTSL 5 BASIC16.45■□□□□ 0.22
NCKAP1LP55160 IER3IP1-202ENST00000639845 832 ntTSL 2 BASIC16.45■□□□□ 0.22
NCKAP1LP55160 PPIL6-207ENST00000521072 4128 ntAPPRIS P1 TSL 1 (best) BASIC16.45■□□□□ 0.22
NCKAP1LP55160 EGLN1-201ENST00000366641 7097 ntAPPRIS P1 TSL 1 (best) BASIC16.45■□□□□ 0.22
NCKAP1LP55160 TMCO5B-204ENST00000529696 1568 ntTSL 2 BASIC16.45■□□□□ 0.22
NCKAP1LP55160 NOS2P2-202ENST00000639528 1659 ntTSL 1 (best) BASIC16.45■□□□□ 0.22
NCKAP1LP55160 DNAJC7-202ENST00000426588 1774 ntTSL 2 BASIC16.45■□□□□ 0.22
NCKAP1LP55160 GOLGA8R-201ENST00000327271 1896 ntAPPRIS P1 TSL 5 BASIC16.45■□□□□ 0.22
NCKAP1LP55160 PNPLA5-204ENST00000593866 2197 ntTSL 2 BASIC16.45■□□□□ 0.22
NCKAP1LP55160 TIGD4-201ENST00000304337 2472 ntAPPRIS P1 TSL 1 (best) BASIC16.45■□□□□ 0.22
NCKAP1LP55160 DNAAF5-201ENST00000297440 3410 ntAPPRIS P2 TSL 1 (best) BASIC16.45■□□□□ 0.22
NCKAP1LP55160 DDX1-201ENST00000233084 2739 ntAPPRIS P1 TSL 1 (best) BASIC16.45■□□□□ 0.22
NCKAP1LP55160 CTDSP1-201ENST00000273062 2638 ntAPPRIS P1 TSL 1 (best) BASIC16.45■□□□□ 0.22
NCKAP1LP55160 APP-208ENST00000439274 2517 ntTSL 1 (best) BASIC16.45■□□□□ 0.22
NCKAP1LP55160 USP35-204ENST00000530267 2419 ntTSL 2 BASIC16.45■□□□□ 0.22
NCKAP1LP55160 RBM46-204ENST00000514866 2315 ntTSL 2 BASIC16.45■□□□□ 0.22
NCKAP1LP55160 KRT17-201ENST00000311208 1524 ntAPPRIS P1 TSL 1 (best) BASIC16.45■□□□□ 0.22
NCKAP1LP55160 SUMO1-203ENST00000392246 1536 ntAPPRIS P1 TSL 1 (best) BASIC16.45■□□□□ 0.22
NCKAP1LP55160 CTCFL-210ENST00000481655 1512 ntTSL 1 (best) BASIC16.45■□□□□ 0.22
NCKAP1LP55160 NFAM1-201ENST00000329021 5602 ntAPPRIS P1 TSL 1 (best) BASIC16.44■□□□□ 0.22
NCKAP1LP55160 FASTKD5-201ENST00000380266 2874 ntAPPRIS P1 TSL 1 (best) BASIC16.44■□□□□ 0.22
NCKAP1LP55160 SEC24D-202ENST00000419654 2786 ntTSL 5 BASIC16.44■□□□□ 0.22
NCKAP1LP55160 AC079336.5-201ENST00000581360 2480 ntTSL 2 BASIC16.44■□□□□ 0.22
NCKAP1LP55160 AGT-201ENST00000366667 2291 ntAPPRIS P1 TSL 1 (best) BASIC16.44■□□□□ 0.22
NCKAP1LP55160 MSI2-202ENST00000322684 1860 ntAPPRIS ALT2 TSL 2 BASIC16.44■□□□□ 0.22
NCKAP1LP55160 ATRNL1-201ENST00000355044 8479 ntAPPRIS P1 TSL 1 (best) BASIC16.44■□□□□ 0.22
NCKAP1LP55160 LDHAL6B-201ENST00000307144 1693 ntAPPRIS P1 BASIC16.44■□□□□ 0.22
NCKAP1LP55160 KCNJ2-202ENST00000535240 1685 ntAPPRIS P1 TSL 1 (best) BASIC16.44■□□□□ 0.22
NCKAP1LP55160 UBTF-204ENST00000436088 2738 ntAPPRIS P1 TSL 2 BASIC16.44■□□□□ 0.22
NCKAP1LP55160 TRMT11-201ENST00000334379 1565 ntAPPRIS P2 TSL 1 (best) BASIC16.44■□□□□ 0.22
NCKAP1LP55160 CCT4-201ENST00000394440 2520 ntAPPRIS P1 TSL 1 (best) BASIC16.44■□□□□ 0.22
NCKAP1LP55160 GPBAR1-203ENST00000521462 1465 ntAPPRIS P1 TSL 2 BASIC16.44■□□□□ 0.22
NCKAP1LP55160 IQSEC3-203ENST00000538872 7094 ntAPPRIS ALT2 TSL 5 BASIC16.44■□□□□ 0.22
NCKAP1LP55160 MEGF10-202ENST00000418761 2238 ntTSL 1 (best) BASIC16.44■□□□□ 0.22
NCKAP1LP55160 FIS1-201ENST00000223136 734 ntAPPRIS P1 TSL 1 (best) BASIC16.44■□□□□ 0.22
NCKAP1LP55160 AC011450.1-202ENST00000358234 573 ntTSL 4 BASIC16.44■□□□□ 0.22
NCKAP1LP55160 ZG16B-201ENST00000382280 831 ntAPPRIS P2 TSL 1 (best) BASIC16.44■□□□□ 0.22
NCKAP1LP55160 CALD1-206ENST00000424922 2124 ntTSL 1 (best) BASIC16.44■□□□□ 0.22
NCKAP1LP55160 RGS5-214ENST00000429865 754 ntTSL 3 BASIC16.44■□□□□ 0.22
NCKAP1LP55160 AC113608.2-201ENST00000448379 487 ntTSL 3 BASIC16.44■□□□□ 0.22
NCKAP1LP55160 ELFN1-AS1-202ENST00000453348 637 ntTSL 1 (best) BASIC16.44■□□□□ 0.22
NCKAP1LP55160 RPL23A-206ENST00000496182 636 ntTSL 3 BASIC16.44■□□□□ 0.22
NCKAP1LP55160 GCOM2-201ENST00000509133 1104 ntBASIC16.44■□□□□ 0.22
NCKAP1LP55160 MFF-223ENST00000524634 647 ntTSL 2 BASIC16.44■□□□□ 0.22
NCKAP1LP55160 AC138123.2-203ENST00000552451 653 ntTSL 3 BASIC16.44■□□□□ 0.22
NCKAP1LP55160 DUX4L45-201ENST00000566406 1057 ntBASIC16.44■□□□□ 0.22
NCKAP1LP55160 HNRNPA1-202ENST00000340913 1842 ntTSL 1 (best) BASIC16.44■□□□□ 0.22
NCKAP1LP55160 SLC39A8-202ENST00000394833 3238 ntAPPRIS P1 TSL 1 (best) BASIC16.44■□□□□ 0.22
NCKAP1LP55160 ASIC1-202ENST00000447966 3778 ntAPPRIS P1 TSL 1 (best) BASIC16.44■□□□□ 0.22
NCKAP1LP55160 CBLN4-201ENST00000064571 3024 ntAPPRIS P1 TSL 1 (best) BASIC16.44■□□□□ 0.22
NCKAP1LP55160 EPHB4-201ENST00000358173 4329 ntAPPRIS P1 TSL 1 (best) BASIC16.44■□□□□ 0.22
NCKAP1LP55160 JRK-210ENST00000614134 8932 ntAPPRIS P4 TSL 1 (best) BASIC16.44■□□□□ 0.22
NCKAP1LP55160 FKBP6-201ENST00000252037 1500 ntAPPRIS P3 TSL 1 (best) BASIC16.44■□□□□ 0.22
NCKAP1LP55160 AL162231.1-201ENST00000421828 1525 ntAPPRIS P2 TSL 1 (best) BASIC16.44■□□□□ 0.22
NCKAP1LP55160 CYTH2-214ENST00000641098 2721 ntAPPRIS ALT1 BASIC16.44■□□□□ 0.22
NCKAP1LP55160 CLIC5-208ENST00000544153 2051 ntTSL 2 BASIC16.44■□□□□ 0.22
NCKAP1LP55160 SELENOS-201ENST00000398226 1439 ntAPPRIS P1 TSL 1 (best) BASIC16.44■□□□□ 0.22
NCKAP1LP55160 ARSE-206ENST00000545496 2506 ntTSL 2 BASIC16.44■□□□□ 0.22
NCKAP1LP55160 PITPNC1-203ENST00000580974 6182 ntAPPRIS ALT2 TSL 1 (best) BASIC16.44■□□□□ 0.22
NCKAP1LP55160 SPIRE1-201ENST00000309836 1877 ntTSL 2 BASIC16.44■□□□□ 0.22
NCKAP1LP55160 AC099850.1-201ENST00000451775 1338 ntTSL 2 BASIC16.44■□□□□ 0.22
NCKAP1LP55160 CENPBD1P1-204ENST00000487264 1308 ntTSL 1 (best) BASIC16.44■□□□□ 0.22
NCKAP1LP55160 AAMP-202ENST00000420660 1761 ntTSL 2 BASIC16.43■□□□□ 0.22
NCKAP1LP55160 AP1S3-206ENST00000443700 1785 ntTSL 1 (best) BASIC16.43■□□□□ 0.22
NCKAP1LP55160 NFYA-202ENST00000353205 1660 ntTSL 5 BASIC16.43■□□□□ 0.22
NCKAP1LP55160 UBR5-207ENST00000520539 10297 ntAPPRIS P3 TSL 1 (best) BASIC16.43■□□□□ 0.22
NCKAP1LP55160 SLC25A38-201ENST00000273158 2123 ntAPPRIS P1 TSL 1 (best) BASIC16.43■□□□□ 0.22
NCKAP1LP55160 WASHC2C-202ENST00000359860 4471 ntAPPRIS ALT2 TSL 5 BASIC16.43■□□□□ 0.22
NCKAP1LP55160 SLC22A7-202ENST00000372585 2555 ntAPPRIS P4 TSL 5 BASIC16.43■□□□□ 0.22
NCKAP1LP55160 RER1-203ENST00000378513 3000 ntTSL 3 BASIC16.43■□□□□ 0.22
NCKAP1LP55160 SYN1-201ENST00000295987 3299 ntAPPRIS P3 TSL 2 BASIC16.43■□□□□ 0.22
NCKAP1LP55160 SH3KBP1-201ENST00000379697 1944 ntTSL 5 BASIC16.43■□□□□ 0.22
NCKAP1LP55160 CELF4-223ENST00000603232 1906 ntAPPRIS ALT1 TSL 1 (best) BASIC16.43■□□□□ 0.22
NCKAP1LP55160 GLT1D1-201ENST00000281703 2725 ntTSL 2 BASIC16.43■□□□□ 0.22
NCKAP1LP55160 RNF157-AS1-204ENST00000590137 1812 ntTSL 2 BASIC16.43■□□□□ 0.22
NCKAP1LP55160 KCNN2-201ENST00000264773 2512 ntAPPRIS P2 TSL 1 (best) BASIC16.43■□□□□ 0.22
Retrieved 100 of 98,524 protein–RNA pairs in 32.9 ms