Protein–RNA interactions for Protein: P01574

IFNB1, Interferon beta, humanhuman

Predictions only

Length 187 aa.

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Protein RNA Prediction (catRAPID) Interaction (ENCODE eCLIP)
Gene UniProt Accession Transcript Symbol Ensembl Transcript ID Length Transcript Status Prediction Score Prediction z-Score p-Value Fold Change
IFNB1P01574 AP001160.2-201ENST00000596071 487 ntBASIC15.7■□□□□ 0.1
IFNB1P01574 GRIA3-205ENST00000611689 936 ntTSL 1 (best) BASIC15.7■□□□□ 0.1
IFNB1P01574 RCAN3-211ENST00000630217 658 ntTSL 1 (best) BASIC15.7■□□□□ 0.1
IFNB1P01574 CNKSR2-203ENST00000425654 5668 ntTSL 1 (best) BASIC15.7■□□□□ 0.1
IFNB1P01574 ITGAM-202ENST00000544665 4718 ntAPPRIS ALT1 TSL 1 (best) BASIC15.7■□□□□ 0.1
IFNB1P01574 TAF4B-203ENST00000578121 3204 ntAPPRIS ALT2 TSL 2 BASIC15.7■□□□□ 0.1
IFNB1P01574 PPARGC1B-203ENST00000394320 4803 ntTSL 1 (best) BASIC15.7■□□□□ 0.1
IFNB1P01574 NRDC-201ENST00000352171 3691 ntAPPRIS ALT2 TSL 1 (best) BASIC15.7■□□□□ 0.1
IFNB1P01574 TLL1-206ENST00000513213 1829 ntTSL 1 (best) BASIC15.7■□□□□ 0.1
IFNB1P01574 SLC29A1-204ENST00000371731 2258 ntAPPRIS P1 TSL 5 BASIC15.7■□□□□ 0.1
IFNB1P01574 PDGFRL-201ENST00000251630 1901 ntAPPRIS P1 TSL 5 BASIC15.7■□□□□ 0.1
IFNB1P01574 TCOF1-202ENST00000377797 5095 ntAPPRIS ALT2 TSL 5 BASIC15.7■□□□□ 0.1
IFNB1P01574 NOP2-222ENST00000617555 2017 ntTSL 5 BASIC15.7■□□□□ 0.1
IFNB1P01574 PAX6-202ENST00000379107 2579 ntAPPRIS P4 TSL 5 BASIC15.7■□□□□ 0.1
IFNB1P01574 SCLT1-209ENST00000511426 1696 ntAPPRIS ALT2 TSL 1 (best) BASIC15.7■□□□□ 0.1
IFNB1P01574 TPO-201ENST00000329066 3138 ntAPPRIS P1 TSL 1 (best) BASIC15.7■□□□□ 0.1
IFNB1P01574 WDR1-203ENST00000382452 3142 ntAPPRIS P1 TSL 1 (best) BASIC15.7■□□□□ 0.1
IFNB1P01574 TRAF1-201ENST00000373887 6324 ntAPPRIS P1 TSL 1 (best) BASIC15.7■□□□□ 0.1
IFNB1P01574 TMEM150A-203ENST00000409668 1776 ntAPPRIS P1 TSL 2 BASIC15.7■□□□□ 0.1
IFNB1P01574 SLC7A4-202ENST00000403586 2307 ntAPPRIS P1 TSL 1 (best) BASIC15.69■□□□□ 0.1
IFNB1P01574 CNNM2-203ENST00000433628 3857 ntAPPRIS ALT1 TSL 2 BASIC15.69■□□□□ 0.1
IFNB1P01574 TMEM209-202ENST00000462753 2322 ntAPPRIS ALT1 TSL 5 BASIC15.69■□□□□ 0.1
IFNB1P01574 AL360270.3-201ENST00000609118 1348 ntBASIC15.69■□□□□ 0.1
IFNB1P01574 IGHA1-202ENST00000641837 1310 ntAPPRIS P5 BASIC15.69■□□□□ 0.1
IFNB1P01574 PKN1-202ENST00000342216 2960 ntTSL 2 BASIC15.69■□□□□ 0.1
IFNB1P01574 TCHH-201ENST00000368804 6900 ntAPPRIS P1 TSL 5 BASIC15.69■□□□□ 0.1
IFNB1P01574 HSPA1B-201ENST00000375650 2521 ntAPPRIS P1 BASIC15.69■□□□□ 0.1
IFNB1P01574 ZNF587-203ENST00000423137 1974 ntAPPRIS ALT2 TSL 1 (best) BASIC15.69■□□□□ 0.1
IFNB1P01574 FGFR1-201ENST00000326324 3816 ntTSL 1 (best) BASIC15.69■□□□□ 0.1
IFNB1P01574 PXYLP1-201ENST00000286353 3281 ntAPPRIS P1 TSL 1 (best) BASIC15.69■□□□□ 0.1
IFNB1P01574 MAGIX-208ENST00000616266 3295 ntAPPRIS ALT2 TSL 5 BASIC15.69■□□□□ 0.1
IFNB1P01574 PSD-209ENST00000611678 3382 ntTSL 1 (best) BASIC15.69■□□□□ 0.1
IFNB1P01574 PDHX-201ENST00000227868 2389 ntAPPRIS P1 TSL 1 (best) BASIC15.69■□□□□ 0.1
IFNB1P01574 LRRC6-205ENST00000519595 1736 ntAPPRIS ALT1 TSL 1 (best) BASIC15.69■□□□□ 0.1
IFNB1P01574 GABRG3-208ENST00000615808 10768 ntAPPRIS P1 TSL 1 (best) BASIC15.69■□□□□ 0.1
IFNB1P01574 SLC40A1-201ENST00000261024 3442 ntAPPRIS P1 TSL 1 (best) BASIC15.69■□□□□ 0.1
IFNB1P01574 ALDH4A1-205ENST00000538309 1940 ntTSL 2 BASIC15.69■□□□□ 0.1
IFNB1P01574 GAD2-203ENST00000376261 5858 ntAPPRIS P1 TSL 1 (best) BASIC15.69■□□□□ 0.1
IFNB1P01574 HCST-201ENST00000246551 613 ntAPPRIS P3 TSL 1 (best) BASIC15.69■□□□□ 0.1
IFNB1P01574 FLYWCH2-201ENST00000293981 915 ntAPPRIS P2 TSL 3 BASIC15.69■□□□□ 0.1
IFNB1P01574 AC073349.1-201ENST00000340779 1062 ntTSL 1 (best) BASIC15.69■□□□□ 0.1
IFNB1P01574 HLA-DRB6-201ENST00000411500 1235 ntBASIC15.69■□□□□ 0.1
IFNB1P01574 DIRC3-201ENST00000423123 552 ntAPPRIS P1 TSL 4 BASIC15.69■□□□□ 0.1
IFNB1P01574 AP001058.1-201ENST00000423967 463 ntTSL 2 BASIC15.69■□□□□ 0.1
IFNB1P01574 MEIS3P1-201ENST00000495167 958 ntBASIC15.69■□□□□ 0.1
IFNB1P01574 RCHY1-210ENST00000513257 759 ntTSL 1 (best) BASIC15.69■□□□□ 0.1
IFNB1P01574 AC113383.1-201ENST00000514696 582 ntTSL 4 BASIC15.69■□□□□ 0.1
IFNB1P01574 MSC-AS1-206ENST00000519751 596 ntTSL 4 BASIC15.69■□□□□ 0.1
IFNB1P01574 MTFR1L-218ENST00000526894 733 ntTSL 4 BASIC15.69■□□□□ 0.1
IFNB1P01574 AC067930.5-201ENST00000531730 1173 ntTSL 2 BASIC15.69■□□□□ 0.1
IFNB1P01574 DUX4L27-201ENST00000554796 1261 ntBASIC15.69■□□□□ 0.1
IFNB1P01574 AC010503.1-201ENST00000596027 520 ntTSL 5 BASIC15.69■□□□□ 0.1
IFNB1P01574 AL390754.1-201ENST00000619088 582 ntBASIC15.69■□□□□ 0.1
IFNB1P01574 SCFD2-201ENST00000388940 2221 ntTSL 2 BASIC15.69■□□□□ 0.1
IFNB1P01574 ANKRD18A-201ENST00000399703 4041 ntAPPRIS P1 TSL 1 (best) BASIC15.69■□□□□ 0.1
IFNB1P01574 NCAPH2-202ENST00000395698 1388 ntTSL 1 (best) BASIC15.69■□□□□ 0.1
IFNB1P01574 YTHDF3-205ENST00000539294 5163 ntAPPRIS P2 TSL 1 (best) BASIC15.69■□□□□ 0.1
IFNB1P01574 PRPF3-201ENST00000324862 2433 ntAPPRIS P1 TSL 1 (best) BASIC15.69■□□□□ 0.1
IFNB1P01574 KRT9-202ENST00000588431 1493 ntTSL 1 (best) BASIC15.69■□□□□ 0.1
IFNB1P01574 NFIC-201ENST00000341919 1573 ntTSL 1 (best) BASIC15.69■□□□□ 0.1
IFNB1P01574 NOX4-207ENST00000525196 1555 ntTSL 1 (best) BASIC15.69■□□□□ 0.1
IFNB1P01574 PTPRN-201ENST00000295718 3784 ntAPPRIS P3 TSL 1 (best) BASIC15.69■□□□□ 0.1
IFNB1P01574 GEMIN7-201ENST00000270257 1657 ntAPPRIS P1 TSL 1 (best) BASIC15.69■□□□□ 0.1
IFNB1P01574 RFC5-204ENST00000454402 1655 ntAPPRIS P1 TSL 1 (best) BASIC15.69■□□□□ 0.1
IFNB1P01574 RIC8B-202ENST00000392837 5135 ntAPPRIS ALT2 TSL 5 BASIC15.69■□□□□ 0.1
IFNB1P01574 LTBP3-221ENST00000532932 3327 ntTSL 2 BASIC15.69■□□□□ 0.1
IFNB1P01574 RPS6KL1-210ENST00000555647 3309 ntAPPRIS P1 TSL 5 BASIC15.69■□□□□ 0.1
IFNB1P01574 CEP131-208ENST00000575907 3444 ntAPPRIS ALT2 TSL 1 (best) BASIC15.69■□□□□ 0.1
IFNB1P01574 MN1-201ENST00000302326 7556 ntAPPRIS P1 TSL 1 (best) BASIC15.69■□□□□ 0.1
IFNB1P01574 AP001267.2-201ENST00000532619 2086 ntBASIC15.69■□□□□ 0.1
IFNB1P01574 DFNA5-201ENST00000342947 2590 ntAPPRIS P1 TSL 1 (best) BASIC15.69■□□□□ 0.1
IFNB1P01574 RNF123-202ENST00000432042 2670 ntTSL 1 (best) BASIC15.69■□□□□ 0.1
IFNB1P01574 AC126335.2-201ENST00000623362 4637 ntBASIC15.69■□□□□ 0.1
IFNB1P01574 HNF4G-201ENST00000354370 1728 ntAPPRIS ALT2 TSL 1 (best) BASIC15.68■□□□□ 0.1
IFNB1P01574 IL9R-202ENST00000369423 2032 ntAPPRIS ALT2 TSL 1 (best) BASIC15.68■□□□□ 0.1
IFNB1P01574 ZNF618-201ENST00000288466 9109 ntAPPRIS P3 TSL 2 BASIC15.68■□□□□ 0.1
IFNB1P01574 ADGRB2-205ENST00000398547 4857 ntAPPRIS ALT2 TSL 5 BASIC15.68■□□□□ 0.1
IFNB1P01574 LRRC20-204ENST00000373224 3095 ntAPPRIS P1 TSL 2 BASIC15.68■□□□□ 0.1
IFNB1P01574 CTNS-202ENST00000381870 2470 ntTSL 1 (best) BASIC15.68■□□□□ 0.1
IFNB1P01574 ZPBP2-202ENST00000377940 2177 ntAPPRIS ALT2 TSL 1 (best) BASIC15.68■□□□□ 0.1
IFNB1P01574 AP001627.1-201ENST00000437426 1754 ntTSL 1 (best) BASIC15.68■□□□□ 0.1
IFNB1P01574 SPDYE6-201ENST00000563237 1691 ntAPPRIS P1 TSL 5 BASIC15.68■□□□□ 0.1
IFNB1P01574 CLK3P2-201ENST00000427566 1453 ntBASIC15.68■□□□□ 0.1
IFNB1P01574 RDM1-227ENST00000619876 1491 ntAPPRIS ALT2 TSL 2 BASIC15.68■□□□□ 0.1
IFNB1P01574 PAK6-202ENST00000455577 4215 ntTSL 2 BASIC15.68■□□□□ 0.1
IFNB1P01574 LINC00313-201ENST00000332440 579 ntTSL 1 (best) BASIC15.68■□□□□ 0.1
IFNB1P01574 CXCL12-206ENST00000395795 404 ntTSL 5 BASIC15.68■□□□□ 0.1
IFNB1P01574 TSSK5P-201ENST00000423978 907 ntBASIC15.68■□□□□ 0.1
IFNB1P01574 AL161785.2-201ENST00000427080 966 ntTSL 3 BASIC15.68■□□□□ 0.1
IFNB1P01574 AL589987.1-201ENST00000453380 819 ntBASIC15.68■□□□□ 0.1
IFNB1P01574 S100A14-206ENST00000476873 1025 ntAPPRIS P1 TSL 1 (best) BASIC15.68■□□□□ 0.1
IFNB1P01574 FAM172A-207ENST00000509739 1031 ntTSL 2 BASIC15.68■□□□□ 0.1
IFNB1P01574 SPDYE18-201ENST00000510091 1050 ntBASIC15.68■□□□□ 0.1
IFNB1P01574 UBXN1-210ENST00000529640 1110 ntAPPRIS ALT1 TSL 5 BASIC15.68■□□□□ 0.1
IFNB1P01574 AC011603.1-201ENST00000553174 717 ntTSL 2 BASIC15.68■□□□□ 0.1
IFNB1P01574 RPL28-205ENST00000558131 444 ntTSL 5 BASIC15.68■□□□□ 0.1
IFNB1P01574 SMCO4-206ENST00000596676 180 ntAPPRIS P1 BASIC15.68■□□□□ 0.1
IFNB1P01574 AL022328.4-201ENST00000608025 1001 ntTSL 2 BASIC15.68■□□□□ 0.1
IFNB1P01574 TRIM29-221ENST00000627238 510 ntTSL 5 BASIC15.68■□□□□ 0.1
IFNB1P01574 OSBPL5-203ENST00000389989 3619 ntTSL 1 (best) BASIC15.68■□□□□ 0.1
Retrieved 100 of 98,524 protein–RNA pairs in 51 ms