Protein–RNA interactions for Protein: O95170

CDRT1, CMT1A duplicated region transcript 1 protein, humanhuman

Predictions only

Length 752 aa.

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Protein RNA Prediction (catRAPID) Interaction (ENCODE eCLIP)
Gene UniProt Accession Transcript Symbol Ensembl Transcript ID Length Transcript Status Prediction Score Prediction z-Score p-Value Fold Change
CDRT1O95170 LINC01237-203ENST00000430555 843 ntTSL 4 BASIC13.54□□□□□ -0.24
CDRT1O95170 AL591424.1-201ENST00000442569 1213 ntBASIC13.54□□□□□ -0.24
CDRT1O95170 AC007834.1-201ENST00000446473 728 ntTSL 3 BASIC13.54□□□□□ -0.24
CDRT1O95170 AKR1A1-204ENST00000471651 1018 ntTSL 1 (best) BASIC13.54□□□□□ -0.24
CDRT1O95170 SLC50A1-209ENST00000484157 886 ntTSL 3 BASIC13.54□□□□□ -0.24
CDRT1O95170 CCNG1-208ENST00000510664 994 ntTSL 5 BASIC13.54□□□□□ -0.24
CDRT1O95170 OR10S1-201ENST00000531945 1121 ntAPPRIS P2 BASIC13.54□□□□□ -0.24
CDRT1O95170 AK2-210ENST00000548033 936 ntTSL 1 (best) BASIC13.54□□□□□ -0.24
CDRT1O95170 INO80E-210ENST00000567705 880 ntTSL 3 BASIC13.54□□□□□ -0.24
CDRT1O95170 AC120114.3-201ENST00000611923 658 ntBASIC13.54□□□□□ -0.24
CDRT1O95170 GAK-222ENST00000618573 1248 ntTSL 1 (best) BASIC13.54□□□□□ -0.24
CDRT1O95170 CAND2-206ENST00000626378 333 ntTSL 5 BASIC13.54□□□□□ -0.24
CDRT1O95170 OR10S1-202ENST00000641123 1121 ntAPPRIS ALT2 BASIC13.54□□□□□ -0.24
CDRT1O95170 AC092902.6-201ENST00000641783 218 ntBASIC13.54□□□□□ -0.24
CDRT1O95170 TUBGCP3-201ENST00000261965 3899 ntAPPRIS P1 TSL 1 (best) BASIC13.54□□□□□ -0.24
CDRT1O95170 NDNF-201ENST00000379692 2885 ntAPPRIS P1 TSL 1 (best) BASIC13.54□□□□□ -0.24
CDRT1O95170 ZNF362-201ENST00000373428 2936 ntAPPRIS P1 TSL 1 (best) BASIC13.54□□□□□ -0.24
CDRT1O95170 TCAF2-202ENST00000411935 2906 ntTSL 5 BASIC13.54□□□□□ -0.24
CDRT1O95170 SLC26A8-201ENST00000355574 3463 ntAPPRIS P1 TSL 2 BASIC13.54□□□□□ -0.24
CDRT1O95170 NPFFR1-201ENST00000277942 8921 ntAPPRIS P1 TSL 5 BASIC13.54□□□□□ -0.24
CDRT1O95170 DHTKD1-201ENST00000263035 5159 ntAPPRIS P1 TSL 1 (best) BASIC13.54□□□□□ -0.24
CDRT1O95170 RERE-204ENST00000400908 5790 ntAPPRIS P2 TSL 1 (best) BASIC13.54□□□□□ -0.24
CDRT1O95170 NFIC-206ENST00000589123 8068 ntTSL 1 (best) BASIC13.54□□□□□ -0.24
CDRT1O95170 CHID1-215ENST00000528581 1431 ntTSL 2 BASIC13.54□□□□□ -0.24
CDRT1O95170 NLRX1-204ENST00000409991 3716 ntAPPRIS P1 TSL 1 (best) BASIC13.54□□□□□ -0.24
CDRT1O95170 GET4-202ENST00000407192 4356 ntAPPRIS ALT2 TSL 1 (best) BASIC13.54□□□□□ -0.24
CDRT1O95170 CASC10-201ENST00000377113 3801 ntAPPRIS P1 TSL 1 (best) BASIC13.54□□□□□ -0.24
CDRT1O95170 LSMEM2-201ENST00000316436 1494 ntAPPRIS P1 TSL 1 (best) BASIC13.54□□□□□ -0.24
CDRT1O95170 RRAGB-202ENST00000374941 2061 ntTSL 1 (best) BASIC13.54□□□□□ -0.24
CDRT1O95170 COL22A1-201ENST00000303045 6346 ntAPPRIS P2 TSL 1 (best) BASIC13.54□□□□□ -0.24
CDRT1O95170 CELF1-201ENST00000310513 4583 ntAPPRIS ALT1 TSL 1 (best) BASIC13.54□□□□□ -0.24
CDRT1O95170 SETD1A-201ENST00000262519 6451 ntAPPRIS P1 TSL 1 (best) BASIC13.54□□□□□ -0.24
CDRT1O95170 CARMIL2-202ENST00000545661 4119 ntAPPRIS ALT2 TSL 1 (best) BASIC13.54□□□□□ -0.24
CDRT1O95170 MSRB3-202ENST00000355192 4289 ntTSL 1 (best) BASIC13.53□□□□□ -0.24
CDRT1O95170 PCMTD1-201ENST00000360540 4252 ntAPPRIS P1 TSL 5 BASIC13.53□□□□□ -0.24
CDRT1O95170 C12orf40-202ENST00000405531 1656 ntAPPRIS ALT2 TSL 1 (best) BASIC13.53□□□□□ -0.24
CDRT1O95170 TNK1-207ENST00000576812 3023 ntAPPRIS ALT1 TSL 1 (best) BASIC13.53□□□□□ -0.24
CDRT1O95170 CRELD1-203ENST00000397170 1728 ntAPPRIS P1 TSL 5 BASIC13.53□□□□□ -0.24
CDRT1O95170 IRF3-217ENST00000597198 1741 ntAPPRIS P1 TSL 2 BASIC13.53□□□□□ -0.24
CDRT1O95170 SLC43A2-201ENST00000301335 8136 ntAPPRIS P1 TSL 1 (best) BASIC13.53□□□□□ -0.24
CDRT1O95170 AFF3-202ENST00000409236 9849 ntAPPRIS ALT2 TSL 5 BASIC13.53□□□□□ -0.24
CDRT1O95170 AL391244.1-206ENST00000447725 1843 ntTSL 5 BASIC13.53□□□□□ -0.24
CDRT1O95170 SELENOF-208ENST00000616787 1835 ntAPPRIS ALT1 TSL 5 BASIC13.53□□□□□ -0.24
CDRT1O95170 SLC1A7-202ENST00000371494 2637 ntAPPRIS P3 TSL 1 (best) BASIC13.53□□□□□ -0.24
CDRT1O95170 EHMT2-204ENST00000395728 4129 ntAPPRIS ALT2 TSL 1 (best) BASIC13.53□□□□□ -0.24
CDRT1O95170 TMUB2-202ENST00000357984 1921 ntAPPRIS P3 TSL 1 (best) BASIC13.53□□□□□ -0.24
CDRT1O95170 CDHR5-203ENST00000397542 3489 ntAPPRIS P4 TSL 1 (best) BASIC13.53□□□□□ -0.24
CDRT1O95170 GDPD5-201ENST00000336898 3523 ntAPPRIS P1 TSL 1 (best) BASIC13.53□□□□□ -0.24
CDRT1O95170 PCM1-202ENST00000327578 8287 ntTSL 5 BASIC13.53□□□□□ -0.24
CDRT1O95170 LINC02346-201ENST00000383019 1967 ntTSL 2 BASIC13.53□□□□□ -0.24
CDRT1O95170 STK3-201ENST00000419617 2826 ntAPPRIS P1 TSL 1 (best) BASIC13.53□□□□□ -0.24
CDRT1O95170 MFNG-202ENST00000416983 2034 ntTSL 2 BASIC13.53□□□□□ -0.24
CDRT1O95170 MYD88-201ENST00000396334 2850 ntAPPRIS P3 TSL 1 (best) BASIC13.53□□□□□ -0.24
CDRT1O95170 CPA5-205ENST00000466363 2099 ntAPPRIS P1 TSL 5 BASIC13.53□□□□□ -0.24
CDRT1O95170 AL357054.3-201ENST00000607084 2055 ntTSL 5 BASIC13.53□□□□□ -0.24
CDRT1O95170 LGR5-201ENST00000266674 4611 ntAPPRIS P1 TSL 1 (best) BASIC13.53□□□□□ -0.24
CDRT1O95170 DPY30-201ENST00000295066 631 ntAPPRIS P1 TSL 1 (best) BASIC13.53□□□□□ -0.24
CDRT1O95170 CCDC84-201ENST00000334418 1202 ntAPPRIS P1 TSL 1 (best) BASIC13.53□□□□□ -0.24
CDRT1O95170 DPY30-202ENST00000342166 708 ntAPPRIS P1 TSL 1 (best) BASIC13.53□□□□□ -0.24
CDRT1O95170 ART5-201ENST00000359918 1241 ntAPPRIS P1 TSL 1 (best) BASIC13.53□□□□□ -0.24
CDRT1O95170 PGLYRP4-202ENST00000368739 2116 ntAPPRIS ALT1 TSL 5 BASIC13.53□□□□□ -0.24
CDRT1O95170 FBXO44-205ENST00000376768 959 ntTSL 2 BASIC13.53□□□□□ -0.24
CDRT1O95170 CCDC107-204ENST00000378409 1173 ntAPPRIS ALT2 TSL 1 (best) BASIC13.53□□□□□ -0.24
CDRT1O95170 HLA-H-201ENST00000383620 1096 ntBASIC13.53□□□□□ -0.24
CDRT1O95170 ZGLP1-201ENST00000403352 1028 ntAPPRIS ALT2 TSL 5 BASIC13.53□□□□□ -0.24
CDRT1O95170 SPDYE11-202ENST00000450699 704 ntBASIC13.53□□□□□ -0.24
CDRT1O95170 SMIM27-204ENST00000453396 1003 ntAPPRIS ALT2 TSL 3 BASIC13.53□□□□□ -0.24
CDRT1O95170 RN7SL589P-201ENST00000481268 310 ntBASIC13.53□□□□□ -0.24
CDRT1O95170 DDIT4-AS1-201ENST00000491934 847 ntTSL 5 BASIC13.53□□□□□ -0.24
CDRT1O95170 NAALADL1-207ENST00000526799 959 ntTSL 5 BASIC13.53□□□□□ -0.24
CDRT1O95170 FAM86C2P-203ENST00000528684 1004 ntBASIC13.53□□□□□ -0.24
CDRT1O95170 NAALADL1-208ENST00000528884 973 ntTSL 1 (best) BASIC13.53□□□□□ -0.24
CDRT1O95170 RPL8-207ENST00000528957 1015 ntAPPRIS P1 TSL 1 (best) BASIC13.53□□□□□ -0.24
CDRT1O95170 RNF34-208ENST00000555076 593 ntTSL 3 BASIC13.53□□□□□ -0.24
CDRT1O95170 AC243562.1-201ENST00000560672 389 ntBASIC13.53□□□□□ -0.24
CDRT1O95170 AP000842.3-202ENST00000569238 1080 ntBASIC13.53□□□□□ -0.24
CDRT1O95170 NDUFAB1-205ENST00000570319 885 ntAPPRIS P1 TSL 1 (best) BASIC13.53□□□□□ -0.24
CDRT1O95170 SPDYE9P-201ENST00000570642 692 ntBASIC13.53□□□□□ -0.24
CDRT1O95170 PFN1-203ENST00000574872 1173 ntTSL 2 BASIC13.53□□□□□ -0.24
CDRT1O95170 PIN1-206ENST00000587625 878 ntTSL 2 BASIC13.53□□□□□ -0.24
CDRT1O95170 A1BG-AS1-204ENST00000595302 2130 ntTSL 2 BASIC13.53□□□□□ -0.24
CDRT1O95170 AC008878.4-201ENST00000602083 293 ntTSL 5 BASIC13.53□□□□□ -0.24
CDRT1O95170 SPDYE10P-202ENST00000612005 668 ntBASIC13.53□□□□□ -0.24
CDRT1O95170 SPDYE8P-202ENST00000612377 668 ntBASIC13.53□□□□□ -0.24
CDRT1O95170 HPSE2-205ENST00000614306 447 ntTSL 5 BASIC13.53□□□□□ -0.24
CDRT1O95170 SPPL2A-201ENST00000261854 7372 ntAPPRIS P1 TSL 1 (best) BASIC13.53□□□□□ -0.24
CDRT1O95170 ELK4-202ENST00000357992 10239 ntAPPRIS P1 TSL 1 (best) BASIC13.53□□□□□ -0.24
CDRT1O95170 RTP1-201ENST00000312295 2217 ntAPPRIS P1 TSL 1 (best) BASIC13.53□□□□□ -0.24
CDRT1O95170 MAP7-204ENST00000454590 3119 ntAPPRIS ALT2 TSL 2 BASIC13.53□□□□□ -0.24
CDRT1O95170 HIF3A-202ENST00000244303 2250 ntTSL 2 BASIC13.53□□□□□ -0.24
CDRT1O95170 GP6-201ENST00000310373 2268 ntAPPRIS P3 TSL 1 (best) BASIC13.53□□□□□ -0.24
CDRT1O95170 NRP2-201ENST00000272849 5909 ntTSL 1 (best) BASIC13.53□□□□□ -0.24
CDRT1O95170 AP003397.1-201ENST00000525706 1387 ntTSL 1 (best) BASIC13.53□□□□□ -0.24
CDRT1O95170 RNF170-209ENST00000534961 4116 ntAPPRIS P1 TSL 1 (best) BASIC13.53□□□□□ -0.24
CDRT1O95170 DOCK4-206ENST00000437633 6212 ntAPPRIS P2 TSL 1 (best) BASIC13.53□□□□□ -0.24
CDRT1O95170 ZNF202-206ENST00000529691 3384 ntAPPRIS P1 TSL 2 BASIC13.53□□□□□ -0.24
CDRT1O95170 RASSF3-204ENST00000542104 3492 ntTSL 1 (best) BASIC13.53□□□□□ -0.24
CDRT1O95170 MSC-AS1-208ENST00000522519 1537 ntTSL 2 BASIC13.53□□□□□ -0.24
CDRT1O95170 TEX28-203ENST00000617225 1525 ntAPPRIS P1 TSL 1 (best) BASIC13.53□□□□□ -0.24
CDRT1O95170 GNAO1-202ENST00000262494 5767 ntAPPRIS ALT1 TSL 1 (best) BASIC13.53□□□□□ -0.24
Retrieved 100 of 98,524 protein–RNA pairs in 48.4 ms