Protein–RNA interactions for Protein: A2A3K4

PTPDC1, Protein tyrosine phosphatase domain-containing protein 1, humanhuman

Predictions only

Length 754 aa.

Download Table  
Protein RNA Prediction (catRAPID) Interaction (ENCODE eCLIP)
Gene UniProt Accession Transcript Symbol Ensembl Transcript ID Length Transcript Status Prediction Score Prediction z-Score p-Value Fold Change
PTPDC1A2A3K4 TGFB1I1-201ENST00000361773 1773 ntAPPRIS P3 TSL 1 (best) BASIC17.76■□□□□ 0.43
PTPDC1A2A3K4 ADCYAP1R1-204ENST00000409489 1761 ntTSL 5 BASIC17.76■□□□□ 0.43
PTPDC1A2A3K4 TC2N-201ENST00000340892 4708 ntAPPRIS P1 TSL 1 (best) BASIC17.76■□□□□ 0.43
PTPDC1A2A3K4 PIK3IP1-201ENST00000215912 2467 ntAPPRIS P1 TSL 1 (best) BASIC17.76■□□□□ 0.43
PTPDC1A2A3K4 CYP4F3-203ENST00000586182 2338 ntAPPRIS ALT1 TSL 2 BASIC17.76■□□□□ 0.43
PTPDC1A2A3K4 F2-201ENST00000311907 2023 ntAPPRIS P1 TSL 1 (best) BASIC17.76■□□□□ 0.43
PTPDC1A2A3K4 SETD1B-201ENST00000267197 5772 ntAPPRIS ALT2 TSL 5 BASIC17.76■□□□□ 0.43
PTPDC1A2A3K4 PVR-202ENST00000344956 3166 ntAPPRIS ALT2 TSL 5 BASIC17.76■□□□□ 0.43
PTPDC1A2A3K4 AIFM2-202ENST00000373248 2570 ntAPPRIS P1 TSL 1 (best) BASIC17.76■□□□□ 0.43
PTPDC1A2A3K4 PNMA3-202ENST00000593810 1432 ntAPPRIS P1 BASIC17.76■□□□□ 0.43
PTPDC1A2A3K4 HEY1-202ENST00000354724 2293 ntAPPRIS P3 TSL 1 (best) BASIC17.76■□□□□ 0.43
PTPDC1A2A3K4 PRKN-201ENST00000338468 1276 ntTSL 1 (best) BASIC17.76■□□□□ 0.43
PTPDC1A2A3K4 BRF1-202ENST00000379932 884 ntTSL 5 BASIC17.76■□□□□ 0.43
PTPDC1A2A3K4 NDUFC1-203ENST00000394228 761 ntAPPRIS P1 TSL 2 BASIC17.76■□□□□ 0.43
PTPDC1A2A3K4 SGK2-207ENST00000426287 1182 ntTSL 1 (best) BASIC17.76■□□□□ 0.43
PTPDC1A2A3K4 MACROD2-AS1-201ENST00000439451 1230 ntTSL 1 (best) BASIC17.76■□□□□ 0.43
PTPDC1A2A3K4 H2AFV-207ENST00000446531 1041 ntTSL 2 BASIC17.76■□□□□ 0.43
PTPDC1A2A3K4 AP000552.1-208ENST00000452952 576 ntTSL 4 BASIC17.76■□□□□ 0.43
PTPDC1A2A3K4 AC090735.1-201ENST00000523881 488 ntTSL 4 BASIC17.76■□□□□ 0.43
PTPDC1A2A3K4 AIPL1-204ENST00000570466 1196 ntTSL 1 (best) BASIC17.76■□□□□ 0.43
PTPDC1A2A3K4 LINC01887-202ENST00000584734 860 ntTSL 3 BASIC17.76■□□□□ 0.43
PTPDC1A2A3K4 LDLRAD4-205ENST00000585931 2118 ntTSL 1 (best) BASIC17.76■□□□□ 0.43
PTPDC1A2A3K4 AC005262.2-201ENST00000587701 452 ntTSL 5 BASIC17.76■□□□□ 0.43
PTPDC1A2A3K4 MIR6799-201ENST00000620297 69 ntBASIC17.76■□□□□ 0.43
PTPDC1A2A3K4 SYNE2-228ENST00000639659 1290 ntTSL 1 (best) BASIC17.76■□□□□ 0.43
PTPDC1A2A3K4 TIMP2-201ENST00000262768 3652 ntAPPRIS P1 TSL 1 (best) BASIC17.76■□□□□ 0.43
PTPDC1A2A3K4 DIDO1-207ENST00000395343 8477 ntAPPRIS ALT2 TSL 1 (best) BASIC17.76■□□□□ 0.43
PTPDC1A2A3K4 MUM1-201ENST00000415183 2837 ntAPPRIS ALT2 TSL 1 (best) BASIC17.76■□□□□ 0.43
PTPDC1A2A3K4 PHLDB1-202ENST00000361417 5753 ntAPPRIS P3 TSL 1 (best) BASIC17.76■□□□□ 0.43
PTPDC1A2A3K4 KCNQ4-201ENST00000347132 4099 ntAPPRIS P2 TSL 1 (best) BASIC17.76■□□□□ 0.43
PTPDC1A2A3K4 CACNA1A-202ENST00000573710 7569 ntAPPRIS ALT2 TSL 5 BASIC17.76■□□□□ 0.43
PTPDC1A2A3K4 CKM-201ENST00000221476 1657 ntAPPRIS P1 TSL 1 (best) BASIC17.76■□□□□ 0.43
PTPDC1A2A3K4 ABCC9-203ENST00000326684 1693 ntTSL 1 (best) BASIC17.76■□□□□ 0.43
PTPDC1A2A3K4 MEX3A-202ENST00000532414 6124 ntAPPRIS P1 TSL 1 (best) BASIC17.76■□□□□ 0.43
PTPDC1A2A3K4 FAM160B1-202ENST00000369248 5810 ntAPPRIS P1 TSL 1 (best) BASIC17.76■□□□□ 0.43
PTPDC1A2A3K4 EFNB1-201ENST00000204961 3314 ntAPPRIS P1 TSL 1 (best) BASIC17.76■□□□□ 0.43
PTPDC1A2A3K4 GNS-201ENST00000258145 5122 ntAPPRIS P2 TSL 1 (best) BASIC17.76■□□□□ 0.43
PTPDC1A2A3K4 GPR17-201ENST00000272644 2062 ntAPPRIS P1 TSL 1 (best) BASIC17.76■□□□□ 0.43
PTPDC1A2A3K4 AC018442.1-201ENST00000421439 2061 ntBASIC17.76■□□□□ 0.43
PTPDC1A2A3K4 SALL3-205ENST00000575389 3996 ntTSL 5 BASIC17.76■□□□□ 0.43
PTPDC1A2A3K4 ZNF772-202ENST00000356584 1799 ntAPPRIS ALT2 TSL 2 BASIC17.76■□□□□ 0.43
PTPDC1A2A3K4 TDRD10-201ENST00000368480 1776 ntAPPRIS ALT2 TSL 2 BASIC17.76■□□□□ 0.43
PTPDC1A2A3K4 RSPH3-201ENST00000252655 2175 ntAPPRIS P2 TSL 1 (best) BASIC17.76■□□□□ 0.43
PTPDC1A2A3K4 LMNA-201ENST00000347559 3137 ntTSL 5 BASIC17.76■□□□□ 0.43
PTPDC1A2A3K4 MPPE1-201ENST00000309976 1636 ntTSL 1 (best) BASIC17.76■□□□□ 0.43
PTPDC1A2A3K4 TUBB4B-201ENST00000340384 1637 ntAPPRIS P1 TSL 1 (best) BASIC17.76■□□□□ 0.43
PTPDC1A2A3K4 PPFIBP1-216ENST00000545334 2805 ntTSL 2 BASIC17.76■□□□□ 0.43
PTPDC1A2A3K4 SLC16A3-211ENST00000581287 4830 ntAPPRIS P1 TSL 1 (best) BASIC17.75■□□□□ 0.43
PTPDC1A2A3K4 NEDD4-202ENST00000435532 5869 ntAPPRIS P1 TSL 1 (best) BASIC17.75■□□□□ 0.43
PTPDC1A2A3K4 MFN2-203ENST00000444836 4531 ntAPPRIS P1 TSL 2 BASIC17.75■□□□□ 0.43
PTPDC1A2A3K4 UBC-205ENST00000536769 3745 ntAPPRIS P1 BASIC17.75■□□□□ 0.43
PTPDC1A2A3K4 FLJ16779-201ENST00000612722 7638 ntBASIC17.75■□□□□ 0.43
PTPDC1A2A3K4 ZFYVE28-210ENST00000515169 1590 ntTSL 1 (best) BASIC17.75■□□□□ 0.43
PTPDC1A2A3K4 GLIPR1L2-204ENST00000550916 2609 ntAPPRIS ALT2 TSL 1 (best) BASIC17.75■□□□□ 0.43
PTPDC1A2A3K4 VRK3-207ENST00000594092 1831 ntAPPRIS ALT2 TSL 1 (best) BASIC17.75■□□□□ 0.43
PTPDC1A2A3K4 PDE4A-203ENST00000380702 4781 ntAPPRIS P4 TSL 1 (best) BASIC17.75■□□□□ 0.43
PTPDC1A2A3K4 VAC14-202ENST00000536184 2161 ntTSL 2 BASIC17.75■□□□□ 0.43
PTPDC1A2A3K4 AC005912.2-201ENST00000619492 2400 ntBASIC17.75■□□□□ 0.43
PTPDC1A2A3K4 CXorf40A-201ENST00000359293 974 ntAPPRIS P3 TSL 2 BASIC17.75■□□□□ 0.43
PTPDC1A2A3K4 HSPC324-201ENST00000411904 557 ntTSL 2 BASIC17.75■□□□□ 0.43
PTPDC1A2A3K4 AL121601.1-201ENST00000426367 326 ntTSL 2 BASIC17.75■□□□□ 0.43
PTPDC1A2A3K4 HIST2H2BA-202ENST00000430394 752 ntTSL 1 (best) BASIC17.75■□□□□ 0.43
PTPDC1A2A3K4 AL731661.1-201ENST00000438217 758 ntTSL 5 BASIC17.75■□□□□ 0.43
PTPDC1A2A3K4 AC022137.2-201ENST00000503482 481 ntBASIC17.75■□□□□ 0.43
PTPDC1A2A3K4 LSM1-203ENST00000520755 975 ntTSL 1 (best) BASIC17.75■□□□□ 0.43
PTPDC1A2A3K4 XRCC3-210ENST00000554974 575 ntTSL 4 BASIC17.75■□□□□ 0.43
PTPDC1A2A3K4 C14orf178-204ENST00000557011 474 ntAPPRIS ALT2 TSL 1 (best) BASIC17.75■□□□□ 0.43
PTPDC1A2A3K4 ARNT2-209ENST00000622346 2932 ntTSL 2 BASIC17.75■□□□□ 0.43
PTPDC1A2A3K4 GNB2-202ENST00000393924 1524 ntAPPRIS P1 TSL 1 (best) BASIC17.75■□□□□ 0.43
PTPDC1A2A3K4 NOP2-222ENST00000617555 2017 ntTSL 5 BASIC17.75■□□□□ 0.43
PTPDC1A2A3K4 MAPK7-202ENST00000308406 3149 ntAPPRIS P1 TSL 1 (best) BASIC17.75■□□□□ 0.43
PTPDC1A2A3K4 PDP1-203ENST00000517764 2140 ntAPPRIS P3 TSL 2 BASIC17.75■□□□□ 0.43
PTPDC1A2A3K4 BRF1-211ENST00000547530 3358 ntAPPRIS P1 TSL 1 (best) BASIC17.75■□□□□ 0.43
PTPDC1A2A3K4 AL137783.1-201ENST00000623494 1896 ntBASIC17.75■□□□□ 0.43
PTPDC1A2A3K4 HDAC11-201ENST00000295757 2960 ntAPPRIS P3 TSL 1 (best) BASIC17.75■□□□□ 0.43
PTPDC1A2A3K4 ZNF586-202ENST00000396150 1977 ntTSL 1 (best) BASIC17.75■□□□□ 0.43
PTPDC1A2A3K4 KRT20-201ENST00000167588 1737 ntAPPRIS P1 TSL 1 (best) BASIC17.75■□□□□ 0.43
PTPDC1A2A3K4 OTUD3-201ENST00000375120 6397 ntAPPRIS P1 TSL 1 (best) BASIC17.75■□□□□ 0.43
PTPDC1A2A3K4 MBD4-204ENST00000503197 2099 ntTSL 1 (best) BASIC17.75■□□□□ 0.43
PTPDC1A2A3K4 TLL1-206ENST00000513213 1829 ntTSL 1 (best) BASIC17.75■□□□□ 0.43
PTPDC1A2A3K4 P2RY4-201ENST00000374519 1595 ntAPPRIS P1 BASIC17.74■□□□□ 0.43
PTPDC1A2A3K4 CD8A-203ENST00000409511 3048 ntAPPRIS P4 TSL 2 BASIC17.74■□□□□ 0.43
PTPDC1A2A3K4 ENO3-206ENST00000519584 1322 ntTSL 2 BASIC17.74■□□□□ 0.43
PTPDC1A2A3K4 VWA7-201ENST00000375688 2881 ntAPPRIS P1 TSL 5 BASIC17.74■□□□□ 0.43
PTPDC1A2A3K4 CCDC116-201ENST00000292779 2260 ntAPPRIS P2 TSL 1 (best) BASIC17.74■□□□□ 0.43
PTPDC1A2A3K4 MYCN-202ENST00000638417 1693 ntTSL 2 BASIC17.74■□□□□ 0.43
PTPDC1A2A3K4 ARPP19-202ENST00000561650 3245 ntTSL 2 BASIC17.74■□□□□ 0.43
PTPDC1A2A3K4 KCNS1-201ENST00000306117 4538 ntAPPRIS P1 TSL 1 (best) BASIC17.74■□□□□ 0.43
PTPDC1A2A3K4 OSBPL5-210ENST00000525498 2733 ntTSL 2 BASIC17.74■□□□□ 0.43
PTPDC1A2A3K4 FLI1-207ENST00000534087 3859 ntTSL 2 BASIC17.74■□□□□ 0.43
PTPDC1A2A3K4 SEPT9-244ENST00000592420 2588 ntTSL 2 BASIC17.74■□□□□ 0.43
PTPDC1A2A3K4 C21orf58-204ENST00000397682 2941 ntAPPRIS ALT2 TSL 1 (best) BASIC17.74■□□□□ 0.43
PTPDC1A2A3K4 LDLR-202ENST00000455727 2333 ntTSL 2 BASIC17.74■□□□□ 0.43
PTPDC1A2A3K4 ACKR1-201ENST00000368121 1240 ntBASIC17.74■□□□□ 0.43
PTPDC1A2A3K4 PLAC9-201ENST00000372263 785 ntAPPRIS P2 TSL 1 (best) BASIC17.74■□□□□ 0.43
PTPDC1A2A3K4 IGHV3-35-201ENST00000390617 366 ntAPPRIS P1 BASIC17.74■□□□□ 0.43
PTPDC1A2A3K4 DHDDS-206ENST00000427245 868 ntTSL 5 BASIC17.74■□□□□ 0.43
PTPDC1A2A3K4 MDM2-215ENST00000428863 1037 ntTSL 5 BASIC17.74■□□□□ 0.43
PTPDC1A2A3K4 AC016694.1-201ENST00000434179 700 ntBASIC17.74■□□□□ 0.43
PTPDC1A2A3K4 RPL7P3-201ENST00000441388 714 ntBASIC17.74■□□□□ 0.43
Retrieved 100 of 98,524 protein–RNA pairs in 57.1 ms