Protein–RNA interactions for Protein: Q9Y5R8

TRAPPC1, Trafficking protein particle complex subunit 1, humanhuman

Predictions only

Length 145 aa.

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Protein RNA Prediction (catRAPID) Interaction (ENCODE eCLIP)
Gene UniProt Accession Transcript Symbol Ensembl Transcript ID Length Transcript Status Prediction Score Prediction z-Score p-Value Fold Change
TRAPPC1Q9Y5R8 LINC02188-202ENST00000569740 3775 ntTSL 4 BASIC11.47□□□□□ -0.57
TRAPPC1Q9Y5R8 ELAC2-201ENST00000338034 3148 ntAPPRIS P1 TSL 1 (best) BASIC11.47□□□□□ -0.57
TRAPPC1Q9Y5R8 AP000347.1-201ENST00000417194 5004 ntTSL 1 (best) BASIC11.47□□□□□ -0.57
TRAPPC1Q9Y5R8 SLCO2B1-203ENST00000428359 2368 ntAPPRIS ALT2 TSL 1 (best) BASIC11.47□□□□□ -0.57
TRAPPC1Q9Y5R8 AMT-201ENST00000273588 2280 ntAPPRIS P3 TSL 1 (best) BASIC11.47□□□□□ -0.57
TRAPPC1Q9Y5R8 KIAA1614-202ENST00000367588 9654 ntTSL 1 (best) BASIC11.47□□□□□ -0.57
TRAPPC1Q9Y5R8 NPNT-211ENST00000506666 2187 ntTSL 2 BASIC11.47□□□□□ -0.57
TRAPPC1Q9Y5R8 HOXA7-201ENST00000242159 2018 ntAPPRIS P1 TSL 1 (best) BASIC11.47□□□□□ -0.57
TRAPPC1Q9Y5R8 C8B-201ENST00000371237 2037 ntAPPRIS P1 TSL 1 (best) BASIC11.47□□□□□ -0.57
TRAPPC1Q9Y5R8 KIAA0895-207ENST00000436884 1952 ntTSL 2 BASIC11.47□□□□□ -0.57
TRAPPC1Q9Y5R8 PCDHB10-201ENST00000239446 3290 ntAPPRIS P1 BASIC11.47□□□□□ -0.57
TRAPPC1Q9Y5R8 CASP8-202ENST00000264275 1906 ntAPPRIS ALT2 TSL 1 (best) BASIC11.47□□□□□ -0.57
TRAPPC1Q9Y5R8 LDHA-203ENST00000379412 1922 ntAPPRIS P1 TSL 2 BASIC11.47□□□□□ -0.57
TRAPPC1Q9Y5R8 PITX2-205ENST00000394598 1906 ntAPPRIS ALT1 TSL 1 (best) BASIC11.47□□□□□ -0.57
TRAPPC1Q9Y5R8 NECAP2-202ENST00000443980 1929 ntTSL 2 BASIC11.47□□□□□ -0.57
TRAPPC1Q9Y5R8 ATL3-203ENST00000538786 1920 ntAPPRIS ALT2 TSL 2 BASIC11.47□□□□□ -0.57
TRAPPC1Q9Y5R8 AC022007.1-201ENST00000383808 1897 ntTSL 2 BASIC11.46□□□□□ -0.57
TRAPPC1Q9Y5R8 TLX1NB-202ENST00000445873 1862 ntTSL 1 (best) BASIC11.46□□□□□ -0.57
TRAPPC1Q9Y5R8 DDX19B-207ENST00000563206 1765 ntTSL 5 BASIC11.46□□□□□ -0.57
TRAPPC1Q9Y5R8 TPGS2-202ENST00000383056 1726 ntAPPRIS ALT2 TSL 1 (best) BASIC11.46□□□□□ -0.57
TRAPPC1Q9Y5R8 KCNMA1-210ENST00000404771 4014 ntAPPRIS ALT2 TSL 5 BASIC11.46□□□□□ -0.57
TRAPPC1Q9Y5R8 MECP2-217ENST00000628176 1712 ntTSL 3 BASIC11.46□□□□□ -0.57
TRAPPC1Q9Y5R8 FGF7P3-202ENST00000640245 1707 ntTSL 4 BASIC11.46□□□□□ -0.57
TRAPPC1Q9Y5R8 DCAF8-201ENST00000326837 3972 ntAPPRIS P1 TSL 5 BASIC11.46□□□□□ -0.57
TRAPPC1Q9Y5R8 LPO-203ENST00000421678 2729 ntAPPRIS ALT2 TSL 1 (best) BASIC11.46□□□□□ -0.57
TRAPPC1Q9Y5R8 MAP3K9-205ENST00000554752 11169 ntAPPRIS ALT2 TSL 1 (best) BASIC11.46□□□□□ -0.57
TRAPPC1Q9Y5R8 METTL17-202ENST00000382985 1586 ntAPPRIS ALT2 TSL 1 (best) BASIC11.46□□□□□ -0.57
TRAPPC1Q9Y5R8 AC244197.3-201ENST00000422081 2635 ntAPPRIS P1 TSL 2 BASIC11.46□□□□□ -0.57
TRAPPC1Q9Y5R8 HYOU1-218ENST00000614668 1569 ntTSL 1 (best) BASIC11.46□□□□□ -0.57
TRAPPC1Q9Y5R8 C10orf88-204ENST00000481909 2482 ntAPPRIS P1 TSL 1 (best) BASIC11.46□□□□□ -0.57
TRAPPC1Q9Y5R8 PDLIM2-206ENST00000409141 1463 ntTSL 2 BASIC11.46□□□□□ -0.57
TRAPPC1Q9Y5R8 AL163636.2-201ENST00000553909 1498 ntAPPRIS P1 TSL 2 BASIC11.46□□□□□ -0.57
TRAPPC1Q9Y5R8 CENPL-202ENST00000356198 2357 ntTSL 1 (best) BASIC11.46□□□□□ -0.57
TRAPPC1Q9Y5R8 C5orf38-207ENST00000515640 1441 ntAPPRIS ALT2 TSL 3 BASIC11.46□□□□□ -0.57
TRAPPC1Q9Y5R8 CRADD-202ENST00000542893 1403 ntAPPRIS P1 TSL 1 (best) BASIC11.46□□□□□ -0.57
TRAPPC1Q9Y5R8 SNRK-201ENST00000296088 5183 ntAPPRIS P1 TSL 1 (best) BASIC11.46□□□□□ -0.57
TRAPPC1Q9Y5R8 ABHD14B-204ENST00000461108 1397 ntTSL 2 BASIC11.46□□□□□ -0.57
TRAPPC1Q9Y5R8 FAM237A-203ENST00000543490 1376 ntAPPRIS P1 TSL 5 BASIC11.46□□□□□ -0.57
TRAPPC1Q9Y5R8 SLC4A8-205ENST00000535225 2262 ntTSL 2 BASIC11.46□□□□□ -0.57
TRAPPC1Q9Y5R8 TCF23-201ENST00000296096 4882 ntAPPRIS P1 TSL 1 (best) BASIC11.46□□□□□ -0.57
TRAPPC1Q9Y5R8 NTMT1-203ENST00000372483 1315 ntAPPRIS P1 TSL 1 (best) BASIC11.46□□□□□ -0.57
TRAPPC1Q9Y5R8 LARGE1-203ENST00000402320 3955 ntTSL 1 (best) BASIC11.46□□□□□ -0.57
TRAPPC1Q9Y5R8 AC027031.2-201ENST00000521369 1318 ntTSL 1 (best) BASIC11.46□□□□□ -0.57
TRAPPC1Q9Y5R8 PTCRA-201ENST00000304672 1080 ntAPPRIS P3 TSL 1 (best) BASIC11.46□□□□□ -0.57
TRAPPC1Q9Y5R8 ALPP-201ENST00000392027 2971 ntAPPRIS P1 TSL 1 (best) BASIC11.46□□□□□ -0.57
TRAPPC1Q9Y5R8 RCN1P2-201ENST00000398357 915 ntBASIC11.46□□□□□ -0.57
TRAPPC1Q9Y5R8 PTCHD3P3-201ENST00000403073 906 ntBASIC11.46□□□□□ -0.57
TRAPPC1Q9Y5R8 AC009487.1-202ENST00000437683 402 ntTSL 2 BASIC11.46□□□□□ -0.57
TRAPPC1Q9Y5R8 PTCRA-202ENST00000441198 1005 ntTSL 1 (best) BASIC11.46□□□□□ -0.57
TRAPPC1Q9Y5R8 SLC25A3P1-201ENST00000443844 931 ntBASIC11.46□□□□□ -0.57
TRAPPC1Q9Y5R8 PTCRA-203ENST00000446507 759 ntTSL 1 (best) BASIC11.46□□□□□ -0.57
TRAPPC1Q9Y5R8 TSPEAR-AS1-202ENST00000451035 2108 ntTSL 5 BASIC11.46□□□□□ -0.57
TRAPPC1Q9Y5R8 AC096582.2-201ENST00000510860 516 ntBASIC11.46□□□□□ -0.57
TRAPPC1Q9Y5R8 PAIP2-208ENST00000511706 468 ntTSL 5 BASIC11.46□□□□□ -0.57
TRAPPC1Q9Y5R8 TMEM178A-206ENST00000618232 1286 ntTSL 5 BASIC11.46□□□□□ -0.57
TRAPPC1Q9Y5R8 MDM1-201ENST00000303145 2918 ntAPPRIS P3 TSL 1 (best) BASIC11.46□□□□□ -0.57
TRAPPC1Q9Y5R8 ICOSLG-202ENST00000400377 2907 ntTSL 2 BASIC11.46□□□□□ -0.57
TRAPPC1Q9Y5R8 MRVI1-201ENST00000423302 6126 ntAPPRIS ALT2 TSL 2 BASIC11.46□□□□□ -0.57
TRAPPC1Q9Y5R8 DDC-207ENST00000444124 2041 ntAPPRIS P1 TSL 1 (best) BASIC11.46□□□□□ -0.57
TRAPPC1Q9Y5R8 CEACAM20-204ENST00000617951 2034 ntAPPRIS ALT2 TSL 5 BASIC11.46□□□□□ -0.57
TRAPPC1Q9Y5R8 SMC6-201ENST00000351948 5173 ntAPPRIS P1 TSL 1 (best) BASIC11.46□□□□□ -0.58
TRAPPC1Q9Y5R8 DYSF-203ENST00000409366 6606 ntAPPRIS ALT2 TSL 1 (best) BASIC11.46□□□□□ -0.58
TRAPPC1Q9Y5R8 DYSF-205ENST00000409651 6636 ntAPPRIS ALT2 TSL 1 (best) BASIC11.46□□□□□ -0.58
TRAPPC1Q9Y5R8 VENTXP1-201ENST00000569334 2716 ntBASIC11.46□□□□□ -0.58
TRAPPC1Q9Y5R8 SETD4-207ENST00000399215 4272 ntAPPRIS P1 TSL 2 BASIC11.46□□□□□ -0.58
TRAPPC1Q9Y5R8 AC239799.1-201ENST00000612520 3411 ntAPPRIS P1 TSL 5 BASIC11.46□□□□□ -0.58
TRAPPC1Q9Y5R8 STARD8-203ENST00000374599 4841 ntAPPRIS ALT2 TSL 1 (best) BASIC11.46□□□□□ -0.58
TRAPPC1Q9Y5R8 NR4A1-202ENST00000360284 2589 ntTSL 2 BASIC11.46□□□□□ -0.58
TRAPPC1Q9Y5R8 BPGM-201ENST00000344924 1753 ntAPPRIS P1 TSL 1 (best) BASIC11.46□□□□□ -0.58
TRAPPC1Q9Y5R8 B3GNTL1-211ENST00000576599 1787 ntTSL 2 BASIC11.46□□□□□ -0.58
TRAPPC1Q9Y5R8 RERE-212ENST00000476556 4598 ntTSL 1 (best) BASIC11.46□□□□□ -0.58
TRAPPC1Q9Y5R8 CXCR5-201ENST00000292174 4431 ntAPPRIS P1 TSL 1 (best) BASIC11.46□□□□□ -0.58
TRAPPC1Q9Y5R8 LRCH3-203ENST00000425562 2970 ntAPPRIS ALT2 TSL 5 BASIC11.46□□□□□ -0.58
TRAPPC1Q9Y5R8 ZBTB49-201ENST00000337872 2889 ntAPPRIS P1 TSL 1 (best) BASIC11.46□□□□□ -0.58
TRAPPC1Q9Y5R8 DPEP1-201ENST00000261615 1592 ntAPPRIS P1 TSL 1 (best) BASIC11.45□□□□□ -0.58
TRAPPC1Q9Y5R8 CLPX-201ENST00000300107 4695 ntAPPRIS P1 TSL 1 (best) BASIC11.45□□□□□ -0.58
TRAPPC1Q9Y5R8 RSPH3-201ENST00000252655 2175 ntAPPRIS P2 TSL 1 (best) BASIC11.45□□□□□ -0.58
TRAPPC1Q9Y5R8 ZFAND3-201ENST00000287218 3366 ntAPPRIS P1 TSL 1 (best) BASIC11.45□□□□□ -0.58
TRAPPC1Q9Y5R8 RAB37-205ENST00000392614 2704 ntAPPRIS ALT2 TSL 2 BASIC11.45□□□□□ -0.58
TRAPPC1Q9Y5R8 MATN1-AS1-201ENST00000414532 3925 ntTSL 2 BASIC11.45□□□□□ -0.58
TRAPPC1Q9Y5R8 ZBTB42-201ENST00000342537 3800 ntAPPRIS P1 BASIC11.45□□□□□ -0.58
TRAPPC1Q9Y5R8 RUFY1-204ENST00000437570 2642 ntAPPRIS ALT2 TSL 2 BASIC11.45□□□□□ -0.58
TRAPPC1Q9Y5R8 ANKRD36-204ENST00000461153 6102 ntAPPRIS P2 TSL 5 BASIC11.45□□□□□ -0.58
TRAPPC1Q9Y5R8 PRKD1-201ENST00000331968 3726 ntAPPRIS P3 TSL 1 (best) BASIC11.45□□□□□ -0.58
TRAPPC1Q9Y5R8 PIGT-203ENST00000372689 1971 ntTSL 1 (best) BASIC11.45□□□□□ -0.58
TRAPPC1Q9Y5R8 SH3TC1-201ENST00000245105 4226 ntAPPRIS P1 TSL 2 BASIC11.45□□□□□ -0.58
TRAPPC1Q9Y5R8 SCAF4-201ENST00000286835 4193 ntAPPRIS P3 TSL 1 (best) BASIC11.45□□□□□ -0.58
TRAPPC1Q9Y5R8 TGM2-201ENST00000361475 5070 ntAPPRIS P1 TSL 1 (best) BASIC11.45□□□□□ -0.58
TRAPPC1Q9Y5R8 MGRN1-206ENST00000586183 1841 ntAPPRIS ALT2 TSL 5 BASIC11.45□□□□□ -0.58
TRAPPC1Q9Y5R8 CLEC18B-204ENST00000617101 2321 ntAPPRIS ALT2 TSL 1 (best) BASIC11.45□□□□□ -0.58
TRAPPC1Q9Y5R8 ZBTB20-206ENST00000464560 2816 ntAPPRIS P1 TSL 1 (best) BASIC11.45□□□□□ -0.58
TRAPPC1Q9Y5R8 PRKAR2A-202ENST00000296446 3318 ntTSL 1 (best) BASIC11.45□□□□□ -0.58
TRAPPC1Q9Y5R8 SNRPA1-201ENST00000254193 1055 ntAPPRIS P1 TSL 1 (best) BASIC11.45□□□□□ -0.58
TRAPPC1Q9Y5R8 SGF29-201ENST00000317058 1153 ntAPPRIS P1 TSL 1 (best) BASIC11.45□□□□□ -0.58
TRAPPC1Q9Y5R8 TMEM53-201ENST00000372235 890 ntTSL 2 BASIC11.45□□□□□ -0.58
TRAPPC1Q9Y5R8 SLC35A2-202ENST00000376512 903 ntTSL 2 BASIC11.45□□□□□ -0.58
TRAPPC1Q9Y5R8 USF2-203ENST00000379134 648 ntTSL 1 (best) BASIC11.45□□□□□ -0.58
TRAPPC1Q9Y5R8 MADCAM1-203ENST00000382683 603 ntTSL 1 (best) BASIC11.45□□□□□ -0.58
TRAPPC1Q9Y5R8 RBCK1-206ENST00000400247 790 ntTSL 2 BASIC11.45□□□□□ -0.58
TRAPPC1Q9Y5R8 NPY-203ENST00000407573 705 ntAPPRIS P1 TSL 3 BASIC11.45□□□□□ -0.58
Retrieved 100 of 98,524 protein–RNA pairs in 54.3 ms