Protein–RNA interactions for Protein: Q9HCU0

CD248, Endosialin, humanhuman

Predictions only

Length 757 aa.

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Protein RNA Prediction (catRAPID) Interaction (ENCODE eCLIP)
Gene UniProt Accession Transcript Symbol Ensembl Transcript ID Length Transcript Status Prediction Score Prediction z-Score p-Value Fold Change
CD248Q9HCU0 CLDND1-222ENST00000510545 2124 ntAPPRIS P1 TSL 5 BASIC15.98■□□□□ 0.15
CD248Q9HCU0 PCDH19-202ENST00000373034 9756 ntAPPRIS ALT2 TSL 1 (best) BASIC15.98■□□□□ 0.15
CD248Q9HCU0 NRDC-201ENST00000352171 3691 ntAPPRIS ALT2 TSL 1 (best) BASIC15.98■□□□□ 0.15
CD248Q9HCU0 POMP-201ENST00000380842 1330 ntAPPRIS P1 TSL 1 (best) BASIC15.98■□□□□ 0.15
CD248Q9HCU0 ABHD11-201ENST00000222800 1483 ntAPPRIS P3 TSL 1 (best) BASIC15.98■□□□□ 0.15
CD248Q9HCU0 DUSP13-210ENST00000491677 1770 ntAPPRIS P3 TSL 1 (best) BASIC15.98■□□□□ 0.15
CD248Q9HCU0 BSG-204ENST00000545507 1795 ntTSL 1 (best) BASIC15.98■□□□□ 0.15
CD248Q9HCU0 TMEM184B-202ENST00000361906 3611 ntAPPRIS P1 TSL 1 (best) BASIC15.98■□□□□ 0.15
CD248Q9HCU0 ASAH1-254ENST00000637636 2218 ntAPPRIS ALT1 TSL 5 BASIC15.98■□□□□ 0.15
CD248Q9HCU0 AC138028.2-202ENST00000567968 4528 ntTSL 2 BASIC15.98■□□□□ 0.15
CD248Q9HCU0 KCP-208ENST00000620378 4515 ntAPPRIS ALT2 TSL 5 BASIC15.98■□□□□ 0.15
CD248Q9HCU0 NR4A3-201ENST00000330847 4982 ntAPPRIS P4 TSL 5 BASIC15.98■□□□□ 0.15
CD248Q9HCU0 MAP4-202ENST00000360240 5142 ntAPPRIS P3 TSL 1 (best) BASIC15.98■□□□□ 0.15
CD248Q9HCU0 WARS2-202ENST00000369426 2811 ntTSL 1 (best) BASIC15.98■□□□□ 0.15
CD248Q9HCU0 PDPK1-201ENST00000268673 4728 ntTSL 1 (best) BASIC15.98■□□□□ 0.15
CD248Q9HCU0 KLHL26-201ENST00000300976 4407 ntAPPRIS P1 TSL 1 (best) BASIC15.98■□□□□ 0.15
CD248Q9HCU0 ACOXL-201ENST00000340561 2188 ntTSL 1 (best) BASIC15.98■□□□□ 0.15
CD248Q9HCU0 S100A16-202ENST00000368704 1146 ntAPPRIS P1 TSL 2 BASIC15.98■□□□□ 0.15
CD248Q9HCU0 TMEM53-204ENST00000372243 1579 ntTSL 2 BASIC15.98■□□□□ 0.15
CD248Q9HCU0 AP001056.1-201ENST00000411956 821 ntTSL 3 BASIC15.98■□□□□ 0.15
CD248Q9HCU0 AL606534.2-205ENST00000437691 346 ntTSL 5 BASIC15.98■□□□□ 0.15
CD248Q9HCU0 AC234783.1-201ENST00000441761 496 ntBASIC15.98■□□□□ 0.15
CD248Q9HCU0 PRSS42-202ENST00000447340 1280 ntTSL 2 BASIC15.98■□□□□ 0.15
CD248Q9HCU0 KRT223P-202ENST00000449164 1292 ntBASIC15.98■□□□□ 0.15
CD248Q9HCU0 RNF216P1-213ENST00000494947 946 ntTSL 2 BASIC15.98■□□□□ 0.15
CD248Q9HCU0 SPDYE16-201ENST00000515340 858 ntAPPRIS ALT2 TSL 5 BASIC15.98■□□□□ 0.15
CD248Q9HCU0 SLC37A4-216ENST00000538950 2032 ntTSL 5 BASIC15.98■□□□□ 0.15
CD248Q9HCU0 BX927359.1-201ENST00000556073 543 ntTSL 2 BASIC15.98■□□□□ 0.15
CD248Q9HCU0 GZMH-203ENST00000557220 520 ntTSL 1 (best) BASIC15.98■□□□□ 0.15
CD248Q9HCU0 AL359711.2-201ENST00000563105 872 ntBASIC15.98■□□□□ 0.15
CD248Q9HCU0 AC010491.1-203ENST00000564167 638 ntTSL 2 BASIC15.98■□□□□ 0.15
CD248Q9HCU0 RNPS1-220ENST00000566458 2037 ntTSL 1 (best) BASIC15.98■□□□□ 0.15
CD248Q9HCU0 AC009133.2-201ENST00000566537 547 ntTSL 4 BASIC15.98■□□□□ 0.15
CD248Q9HCU0 KCNJ18-201ENST00000567955 2196 ntAPPRIS P1 TSL 1 (best) BASIC15.98■□□□□ 0.15
CD248Q9HCU0 AC108134.3-202ENST00000571404 1207 ntTSL 5 BASIC15.98■□□□□ 0.15
CD248Q9HCU0 AP001005.4-201ENST00000572530 387 ntTSL 3 BASIC15.98■□□□□ 0.15
CD248Q9HCU0 Metazoa_SRP.80-201ENST00000619894 320 ntBASIC15.98■□□□□ 0.15
CD248Q9HCU0 USP35-203ENST00000529308 4216 ntAPPRIS P1 TSL 5 BASIC15.98■□□□□ 0.15
CD248Q9HCU0 TMPRSS6-201ENST00000346753 3197 ntAPPRIS P3 TSL 1 (best) BASIC15.98■□□□□ 0.15
CD248Q9HCU0 UEVLD-203ENST00000379387 1848 ntTSL 2 BASIC15.98■□□□□ 0.15
CD248Q9HCU0 COLQ-206ENST00000603808 1668 ntAPPRIS ALT1 TSL 1 (best) BASIC15.98■□□□□ 0.15
CD248Q9HCU0 SMIM5-201ENST00000375215 1546 ntAPPRIS P1 TSL 1 (best) BASIC15.98■□□□□ 0.15
CD248Q9HCU0 PDE6G-204ENST00000573076 1505 ntTSL 1 (best) BASIC15.98■□□□□ 0.15
CD248Q9HCU0 INF2-209ENST00000617571 2956 ntTSL 1 (best) BASIC15.98■□□□□ 0.15
CD248Q9HCU0 ENOSF1-209ENST00000580982 1397 ntTSL 5 BASIC15.98■□□□□ 0.15
CD248Q9HCU0 AC018665.1-201ENST00000622927 1362 ntBASIC15.98■□□□□ 0.15
CD248Q9HCU0 DNASE1L1-206ENST00000393638 2665 ntAPPRIS P1 TSL 5 BASIC15.98■□□□□ 0.15
CD248Q9HCU0 POLM-203ENST00000395831 2380 ntTSL 1 (best) BASIC15.98■□□□□ 0.15
CD248Q9HCU0 TNIP1-214ENST00000522226 2238 ntAPPRIS P3 TSL 2 BASIC15.98■□□□□ 0.15
CD248Q9HCU0 TUBGCP2-203ENST00000368563 4218 ntAPPRIS P1 TSL 1 (best) BASIC15.98■□□□□ 0.15
CD248Q9HCU0 SPOCK3-210ENST00000506886 2947 ntAPPRIS ALT2 TSL 5 BASIC15.98■□□□□ 0.15
CD248Q9HCU0 NTN4-201ENST00000343702 3615 ntAPPRIS P1 TSL 1 (best) BASIC15.98■□□□□ 0.15
CD248Q9HCU0 AL034550.2-201ENST00000620523 1771 ntTSL 2 BASIC15.98■□□□□ 0.15
CD248Q9HCU0 PPP3CA-207ENST00000512215 4007 ntTSL 1 (best) BASIC15.97■□□□□ 0.15
CD248Q9HCU0 KTN1-AS1-201ENST00000335142 1465 ntTSL 1 (best) BASIC15.97■□□□□ 0.15
CD248Q9HCU0 AP001282.1-201ENST00000531301 1499 ntBASIC15.97■□□□□ 0.15
CD248Q9HCU0 PML-203ENST00000354026 2885 ntAPPRIS ALT2 TSL 1 (best) BASIC15.97■□□□□ 0.15
CD248Q9HCU0 DBN1-203ENST00000393565 2701 ntAPPRIS ALT2 TSL 5 BASIC15.97■□□□□ 0.15
CD248Q9HCU0 MEIS3-210ENST00000561096 1883 ntAPPRIS ALT2 TSL 2 BASIC15.97■□□□□ 0.15
CD248Q9HCU0 POLM-202ENST00000335195 2444 ntTSL 1 (best) BASIC15.97■□□□□ 0.15
CD248Q9HCU0 MAGEA2B-202ENST00000370293 1714 ntAPPRIS P1 TSL 2 BASIC15.97■□□□□ 0.15
CD248Q9HCU0 PCDHB3-201ENST00000231130 3355 ntAPPRIS P1 BASIC15.97■□□□□ 0.15
CD248Q9HCU0 DBH-AS1-201ENST00000425189 2139 ntTSL 1 (best) BASIC15.97■□□□□ 0.15
CD248Q9HCU0 CEACAM16-201ENST00000405314 1583 ntAPPRIS P1 TSL 5 BASIC15.97■□□□□ 0.15
CD248Q9HCU0 PSMD13-212ENST00000532097 1991 ntAPPRIS P1 TSL 1 (best) BASIC15.97■□□□□ 0.15
CD248Q9HCU0 TIE1-201ENST00000372476 3882 ntAPPRIS P1 TSL 1 (best) BASIC15.97■□□□□ 0.15
CD248Q9HCU0 CIART-203ENST00000369095 1433 ntAPPRIS P3 TSL 1 (best) BASIC15.97■□□□□ 0.15
CD248Q9HCU0 KRT8P22-201ENST00000562317 1415 ntBASIC15.97■□□□□ 0.15
CD248Q9HCU0 LINC00391-201ENST00000433569 1844 ntTSL 5 BASIC15.97■□□□□ 0.15
CD248Q9HCU0 HYAL1-209ENST00000618175 2225 ntAPPRIS P1 TSL 5 BASIC15.97■□□□□ 0.15
CD248Q9HCU0 MEG9-201ENST00000429368 2638 ntTSL 2 BASIC15.97■□□□□ 0.15
CD248Q9HCU0 CSF2-201ENST00000296871 787 ntAPPRIS P1 TSL 1 (best) BASIC15.97■□□□□ 0.15
CD248Q9HCU0 PKIG-203ENST00000372887 769 ntTSL 3 BASIC15.97■□□□□ 0.15
CD248Q9HCU0 IFI27L1-201ENST00000393115 674 ntAPPRIS P1 TSL 1 (best) BASIC15.97■□□□□ 0.15
CD248Q9HCU0 MAGEA12-203ENST00000393900 1299 ntAPPRIS P1 TSL 1 (best) BASIC15.97■□□□□ 0.15
CD248Q9HCU0 BOLA2P3-201ENST00000404566 256 ntBASIC15.97■□□□□ 0.15
CD248Q9HCU0 SFTPC-202ENST00000437090 773 ntTSL 3 BASIC15.97■□□□□ 0.15
CD248Q9HCU0 AL162726.2-201ENST00000438986 1017 ntBASIC15.97■□□□□ 0.15
CD248Q9HCU0 USP40-206ENST00000443711 628 ntTSL 2 BASIC15.97■□□□□ 0.15
CD248Q9HCU0 Z94721.1-201ENST00000444102 385 ntTSL 5 BASIC15.97■□□□□ 0.15
CD248Q9HCU0 LINC01939-201ENST00000445279 694 ntTSL 5 BASIC15.97■□□□□ 0.15
CD248Q9HCU0 AL109811.2-201ENST00000447600 487 ntTSL 3 BASIC15.97■□□□□ 0.15
CD248Q9HCU0 METTL21A-209ENST00000448823 869 ntTSL 5 BASIC15.97■□□□□ 0.15
CD248Q9HCU0 VCX3B-204ENST00000453306 868 ntAPPRIS ALT2 TSL 5 BASIC15.97■□□□□ 0.15
CD248Q9HCU0 PTPRG-AS1-205ENST00000475371 733 ntTSL 3 BASIC15.97■□□□□ 0.15
CD248Q9HCU0 ROPN1-207ENST00000484329 566 ntTSL 3 BASIC15.97■□□□□ 0.15
CD248Q9HCU0 SLC25A47P1-201ENST00000531577 414 ntBASIC15.97■□□□□ 0.15
CD248Q9HCU0 AC008750.2-202ENST00000532688 729 ntTSL 3 BASIC15.97■□□□□ 0.15
CD248Q9HCU0 ATF7-204ENST00000548118 774 ntTSL 1 (best) BASIC15.97■□□□□ 0.15
CD248Q9HCU0 AC011497.1-201ENST00000596781 561 ntTSL 4 BASIC15.97■□□□□ 0.15
CD248Q9HCU0 AC097359.3-201ENST00000603982 1210 ntBASIC15.97■□□□□ 0.15
CD248Q9HCU0 C7orf57-203ENST00000430738 2056 ntTSL 5 BASIC15.97■□□□□ 0.15
CD248Q9HCU0 PHF19-203ENST00000419155 3525 ntTSL 2 BASIC15.97■□□□□ 0.15
CD248Q9HCU0 CYB561D2-202ENST00000418577 1533 ntAPPRIS P1 TSL 2 BASIC15.97■□□□□ 0.15
CD248Q9HCU0 PHRF1-203ENST00000416188 5227 ntAPPRIS P3 TSL 1 (best) BASIC15.97■□□□□ 0.15
CD248Q9HCU0 CCT3-201ENST00000295688 2150 ntAPPRIS P1 TSL 1 (best) BASIC15.97■□□□□ 0.15
CD248Q9HCU0 GPI-205ENST00000586425 1799 ntTSL 5 BASIC15.97■□□□□ 0.15
CD248Q9HCU0 FAM151A-201ENST00000302250 2005 ntAPPRIS P2 TSL 1 (best) BASIC15.97■□□□□ 0.15
CD248Q9HCU0 MAPT-213ENST00000571987 2277 ntAPPRIS P4 TSL 5 BASIC15.97■□□□□ 0.15
CD248Q9HCU0 GOLIM4-201ENST00000309027 2100 ntTSL 1 (best) BASIC15.97■□□□□ 0.15
Retrieved 100 of 98,524 protein–RNA pairs in 48.5 ms