Protein–RNA interactions for Protein: Q9HAU5

UPF2, Regulator of nonsense transcripts 2, humanhuman

Known RBP Predictions only

Length 1,272 aa.

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Protein RNA Prediction (catRAPID) Interaction (ENCODE eCLIP)
Gene UniProt Accession Transcript Symbol Ensembl Transcript ID Length Transcript Status Prediction Score Prediction z-Score p-Value Fold Change
UPF2Q9HAU5 BLOC1S6-212ENST00000566753 1996 ntTSL 2 BASIC18.62■□□□□ 0.57
UPF2Q9HAU5 DOCK4-206ENST00000437633 6212 ntAPPRIS P2 TSL 1 (best) BASIC18.62■□□□□ 0.57
UPF2Q9HAU5 PRRT2-202ENST00000358758 2567 ntAPPRIS P1 TSL 1 (best) BASIC18.62■□□□□ 0.57
UPF2Q9HAU5 WSCD1-202ENST00000539421 2665 ntAPPRIS P1 TSL 5 BASIC18.62■□□□□ 0.57
UPF2Q9HAU5 AICDA-201ENST00000229335 2819 ntAPPRIS P2 TSL 1 (best) BASIC18.62■□□□□ 0.57
UPF2Q9HAU5 AC004890.2-205ENST00000416232 2804 ntTSL 2 BASIC18.62■□□□□ 0.57
UPF2Q9HAU5 GET4-202ENST00000407192 4356 ntAPPRIS ALT2 TSL 1 (best) BASIC18.62■□□□□ 0.57
UPF2Q9HAU5 CYP4F3-201ENST00000221307 5050 ntAPPRIS P3 TSL 1 (best) BASIC18.62■□□□□ 0.57
UPF2Q9HAU5 PPP2R1A-201ENST00000322088 5380 ntAPPRIS P1 TSL 1 (best) BASIC18.61■□□□□ 0.57
UPF2Q9HAU5 PDLIM2-201ENST00000265810 4592 ntTSL 1 (best) BASIC18.61■□□□□ 0.57
UPF2Q9HAU5 AC108134.1-201ENST00000382225 3061 ntTSL 2 BASIC18.61■□□□□ 0.57
UPF2Q9HAU5 AC148477.2-201ENST00000537762 3039 ntTSL 3 BASIC18.61■□□□□ 0.57
UPF2Q9HAU5 TSPAN12-201ENST00000222747 2798 ntAPPRIS P1 TSL 1 (best) BASIC18.61■□□□□ 0.57
UPF2Q9HAU5 CHRNB4-201ENST00000261751 2623 ntAPPRIS P1 TSL 1 (best) BASIC18.61■□□□□ 0.57
UPF2Q9HAU5 MUTYH-210ENST00000450313 1929 ntTSL 5 BASIC18.61■□□□□ 0.57
UPF2Q9HAU5 KAT5-216ENST00000534650 1875 ntTSL 1 (best) BASIC18.61■□□□□ 0.57
UPF2Q9HAU5 AMT-202ENST00000395338 1831 ntAPPRIS ALT1 TSL 1 (best) BASIC18.61■□□□□ 0.57
UPF2Q9HAU5 CDK2AP1-205ENST00000542174 1812 ntTSL 2 BASIC18.61■□□□□ 0.57
UPF2Q9HAU5 SRPX-206ENST00000544439 1842 ntAPPRIS ALT2 TSL 2 BASIC18.61■□□□□ 0.57
UPF2Q9HAU5 PIKFYVE-202ENST00000308862 1640 ntTSL 1 (best) BASIC18.61■□□□□ 0.57
UPF2Q9HAU5 Z97205.2-201ENST00000564697 1639 ntBASIC18.61■□□□□ 0.57
UPF2Q9HAU5 USP4-203ENST00000415188 1454 ntTSL 3 BASIC18.61■□□□□ 0.57
UPF2Q9HAU5 CD2BP2-203ENST00000569466 1417 ntAPPRIS P1 TSL 1 (best) BASIC18.61■□□□□ 0.57
UPF2Q9HAU5 NPBWR2-201ENST00000369768 1352 ntAPPRIS P1 BASIC18.61■□□□□ 0.57
UPF2Q9HAU5 RNASE1-202ENST00000397967 1348 ntAPPRIS P1 TSL 1 (best) BASIC18.61■□□□□ 0.57
UPF2Q9HAU5 FCN2-201ENST00000291744 1057 ntAPPRIS P2 TSL 1 (best) BASIC18.61■□□□□ 0.57
UPF2Q9HAU5 NDUFA3-204ENST00000391764 267 ntTSL 3 BASIC18.61■□□□□ 0.57
UPF2Q9HAU5 MOB1B-202ENST00000396051 1107 ntTSL 2 BASIC18.61■□□□□ 0.57
UPF2Q9HAU5 KRT18P32-201ENST00000424695 1287 ntBASIC18.61■□□□□ 0.57
UPF2Q9HAU5 AC096536.1-201ENST00000443284 440 ntTSL 2 BASIC18.61■□□□□ 0.57
UPF2Q9HAU5 AC067930.5-201ENST00000531730 1173 ntTSL 2 BASIC18.61■□□□□ 0.57
UPF2Q9HAU5 OBP2A-206ENST00000539850 914 ntAPPRIS P1 TSL 5 BASIC18.61■□□□□ 0.57
UPF2Q9HAU5 AL133352.1-203ENST00000557395 1234 ntAPPRIS P5 TSL 2 BASIC18.61■□□□□ 0.57
UPF2Q9HAU5 AL133215.2-201ENST00000609242 977 ntBASIC18.61■□□□□ 0.57
UPF2Q9HAU5 AC007967.4-201ENST00000614700 386 ntBASIC18.61■□□□□ 0.57
UPF2Q9HAU5 C20orf181-201ENST00000623918 480 ntBASIC18.61■□□□□ 0.57
UPF2Q9HAU5 MEX3B-201ENST00000329713 3528 ntAPPRIS P1 TSL 1 (best) BASIC18.61■□□□□ 0.57
UPF2Q9HAU5 HSDL2-202ENST00000398805 3350 ntAPPRIS P1 TSL 1 (best) BASIC18.61■□□□□ 0.57
UPF2Q9HAU5 SMOC2-201ENST00000354536 3150 ntTSL 1 (best) BASIC18.61■□□□□ 0.57
UPF2Q9HAU5 PRNP-201ENST00000379440 2657 ntAPPRIS P1 TSL 1 (best) BASIC18.61■□□□□ 0.57
UPF2Q9HAU5 ZMYND15-201ENST00000269289 2448 ntTSL 5 BASIC18.61■□□□□ 0.57
UPF2Q9HAU5 EPHB4-210ENST00000616502 3737 ntTSL 5 BASIC18.61■□□□□ 0.57
UPF2Q9HAU5 BARHL2-201ENST00000370445 1979 ntAPPRIS P1 TSL 1 (best) BASIC18.61■□□□□ 0.57
UPF2Q9HAU5 ACRBP-201ENST00000229243 1933 ntAPPRIS P1 TSL 1 (best) BASIC18.61■□□□□ 0.57
UPF2Q9HAU5 TJP3-207ENST00000589378 3068 ntAPPRIS ALT2 TSL 2 BASIC18.6■□□□□ 0.57
UPF2Q9HAU5 WDR17-205ENST00000508596 4294 ntAPPRIS ALT1 TSL 1 (best) BASIC18.6■□□□□ 0.57
UPF2Q9HAU5 PLTP-201ENST00000354050 1731 ntTSL 1 (best) BASIC18.6■□□□□ 0.57
UPF2Q9HAU5 RBPMS2-202ENST00000560606 1746 ntTSL 2 BASIC18.6■□□□□ 0.57
UPF2Q9HAU5 NFYA-202ENST00000353205 1660 ntTSL 5 BASIC18.6■□□□□ 0.57
UPF2Q9HAU5 ALOX15-201ENST00000293761 2677 ntAPPRIS P1 TSL 1 (best) BASIC18.6■□□□□ 0.57
UPF2Q9HAU5 PLA2G16-201ENST00000323646 2594 ntAPPRIS P1 TSL 1 (best) BASIC18.6■□□□□ 0.57
UPF2Q9HAU5 TMEM230-201ENST00000202834 1472 ntAPPRIS P1 TSL 1 (best) BASIC18.6■□□□□ 0.57
UPF2Q9HAU5 HSPB1-201ENST00000248553 909 ntAPPRIS P1 TSL 1 (best) BASIC18.6■□□□□ 0.57
UPF2Q9HAU5 GPX7-201ENST00000361314 1228 ntAPPRIS P1 TSL 1 (best) BASIC18.6■□□□□ 0.57
UPF2Q9HAU5 CD81-202ENST00000381036 880 ntTSL 3 BASIC18.6■□□□□ 0.57
UPF2Q9HAU5 AC015922.1-201ENST00000421102 1152 ntBASIC18.6■□□□□ 0.57
UPF2Q9HAU5 AL137003.1-201ENST00000423260 491 ntTSL 5 BASIC18.6■□□□□ 0.57
UPF2Q9HAU5 AL359915.2-201ENST00000425884 745 ntTSL 1 (best) BASIC18.6■□□□□ 0.57
UPF2Q9HAU5 SERBP1P3-201ENST00000459980 809 ntBASIC18.6■□□□□ 0.57
UPF2Q9HAU5 AC106872.10-201ENST00000503778 747 ntTSL 3 BASIC18.6■□□□□ 0.57
UPF2Q9HAU5 SPINK2-203ENST00000506738 763 ntAPPRIS ALT2 TSL 2 BASIC18.6■□□□□ 0.57
UPF2Q9HAU5 AL137786.1-202ENST00000555496 789 ntTSL 5 BASIC18.6■□□□□ 0.57
UPF2Q9HAU5 LINC00237-203ENST00000593272 630 ntTSL 4 BASIC18.6■□□□□ 0.57
UPF2Q9HAU5 MRPL34-205ENST00000600434 793 ntAPPRIS P2 TSL 3 BASIC18.6■□□□□ 0.57
UPF2Q9HAU5 AC090099.1-203ENST00000527059 2945 ntTSL 1 (best) BASIC18.6■□□□□ 0.57
UPF2Q9HAU5 NLRX1-204ENST00000409991 3716 ntAPPRIS P1 TSL 1 (best) BASIC18.6■□□□□ 0.57
UPF2Q9HAU5 PRSS30P-201ENST00000390681 2881 ntTSL 1 (best) BASIC18.6■□□□□ 0.57
UPF2Q9HAU5 TFCP2-201ENST00000257915 3546 ntAPPRIS P1 TSL 1 (best) BASIC18.6■□□□□ 0.57
UPF2Q9HAU5 TSFM-207ENST00000540550 1935 ntTSL 2 BASIC18.6■□□□□ 0.57
UPF2Q9HAU5 SATB2-211ENST00000614512 4972 ntTSL 5 BASIC18.6■□□□□ 0.57
UPF2Q9HAU5 CLEC16A-202ENST00000409552 3365 ntTSL 1 (best) BASIC18.6■□□□□ 0.57
UPF2Q9HAU5 TIGD6-201ENST00000296736 4006 ntAPPRIS P1 TSL 1 (best) BASIC18.6■□□□□ 0.57
UPF2Q9HAU5 DLGAP1-213ENST00000534970 2365 ntTSL 2 BASIC18.6■□□□□ 0.57
UPF2Q9HAU5 HNRNPH3-201ENST00000265866 2339 ntAPPRIS P4 TSL 1 (best) BASIC18.6■□□□□ 0.57
UPF2Q9HAU5 CMBL-201ENST00000296658 2335 ntAPPRIS P1 TSL 1 (best) BASIC18.6■□□□□ 0.57
UPF2Q9HAU5 PHF3-209ENST00000509330 2969 ntTSL 1 (best) BASIC18.6■□□□□ 0.57
UPF2Q9HAU5 ARVCF-203ENST00000406259 2871 ntAPPRIS ALT2 TSL 5 BASIC18.6■□□□□ 0.57
UPF2Q9HAU5 PIGT-202ENST00000279036 2245 ntAPPRIS P1 TSL 1 (best) BASIC18.59■□□□□ 0.57
UPF2Q9HAU5 DMTN-209ENST00000517600 1569 ntTSL 5 BASIC18.59■□□□□ 0.57
UPF2Q9HAU5 NDUFV1-202ENST00000415352 1512 ntAPPRIS ALT1 TSL 2 BASIC18.59■□□□□ 0.57
UPF2Q9HAU5 RAD51D-218ENST00000590016 1528 ntTSL 2 BASIC18.59■□□□□ 0.57
UPF2Q9HAU5 ZNF331-217ENST00000512387 2130 ntAPPRIS P1 TSL 1 (best) BASIC18.59■□□□□ 0.57
UPF2Q9HAU5 MPHOSPH10-205ENST00000498451 2068 ntTSL 1 (best) BASIC18.59■□□□□ 0.57
UPF2Q9HAU5 GNB1L-201ENST00000329517 6706 ntAPPRIS P1 TSL 1 (best) BASIC18.59■□□□□ 0.57
UPF2Q9HAU5 CIART-203ENST00000369095 1433 ntAPPRIS P3 TSL 1 (best) BASIC18.59■□□□□ 0.57
UPF2Q9HAU5 AC007326.5-201ENST00000640084 1382 ntTSL 5 BASIC18.59■□□□□ 0.57
UPF2Q9HAU5 OPN4-202ENST00000372071 2401 ntTSL 1 (best) BASIC18.59■□□□□ 0.57
UPF2Q9HAU5 OAS3-201ENST00000228928 6719 ntAPPRIS P1 TSL 1 (best) BASIC18.59■□□□□ 0.57
UPF2Q9HAU5 VCAN-211ENST00000513984 1825 ntTSL 1 (best) BASIC18.59■□□□□ 0.57
UPF2Q9HAU5 PDSS2-201ENST00000369031 1236 ntTSL 1 (best) BASIC18.59■□□□□ 0.57
UPF2Q9HAU5 CACNB2-206ENST00000377328 1233 ntTSL 1 (best) BASIC18.59■□□□□ 0.57
UPF2Q9HAU5 AQP7-204ENST00000379506 1062 ntTSL 2 BASIC18.59■□□□□ 0.57
UPF2Q9HAU5 MCCD1P2-201ENST00000423228 335 ntBASIC18.59■□□□□ 0.57
UPF2Q9HAU5 CALML4-206ENST00000467889 987 ntAPPRIS P1 TSL 1 (best) BASIC18.59■□□□□ 0.57
UPF2Q9HAU5 TMEM41B-203ENST00000527813 803 ntTSL 5 BASIC18.59■□□□□ 0.57
UPF2Q9HAU5 KRT126P-201ENST00000549467 1181 ntBASIC18.59■□□□□ 0.57
UPF2Q9HAU5 AC040169.1-201ENST00000565382 521 ntBASIC18.59■□□□□ 0.57
UPF2Q9HAU5 AC087741.1-202ENST00000573346 801 ntTSL 3 BASIC18.59■□□□□ 0.57
UPF2Q9HAU5 DEF8-228ENST00000610455 816 ntTSL 1 (best) BASIC18.59■□□□□ 0.57
UPF2Q9HAU5 GTF2IRD2-205ENST00000614386 578 ntTSL 1 (best) BASIC18.59■□□□□ 0.57
Retrieved 100 of 98,524 protein–RNA pairs in 59.2 ms