Protein–RNA interactions for Protein: Q9H2F9

CCDC68, Coiled-coil domain-containing protein 68, humanhuman

Predictions only

Length 335 aa.

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Protein RNA Prediction (catRAPID) Interaction (ENCODE eCLIP)
Gene UniProt Accession Transcript Symbol Ensembl Transcript ID Length Transcript Status Prediction Score Prediction z-Score p-Value Fold Change
CCDC68Q9H2F9 SPDYE19P-201ENST00000338590 713 ntBASIC15.24■□□□□ 0.03
CCDC68Q9H2F9 SP6-201ENST00000342234 3800 ntAPPRIS P1 TSL 1 (best) BASIC15.24■□□□□ 0.03
CCDC68Q9H2F9 RABL2A-203ENST00000393166 1052 ntAPPRIS P3 TSL 1 (best) BASIC15.24■□□□□ 0.03
CCDC68Q9H2F9 FAM166B-201ENST00000399742 958 ntAPPRIS P1 TSL 1 (best) BASIC15.24■□□□□ 0.03
CCDC68Q9H2F9 RFX3-AS1-201ENST00000423112 552 ntTSL 3 BASIC15.24■□□□□ 0.03
CCDC68Q9H2F9 LINC01067-201ENST00000432575 664 ntTSL 3 BASIC15.24■□□□□ 0.03
CCDC68Q9H2F9 MOGAT3-203ENST00000440203 1219 ntAPPRIS ALT2 TSL 2 BASIC15.24■□□□□ 0.03
CCDC68Q9H2F9 AL606760.1-201ENST00000458151 1181 ntTSL 1 (best) BASIC15.24■□□□□ 0.03
CCDC68Q9H2F9 AC106897.1-201ENST00000512874 394 ntTSL 2 BASIC15.24■□□□□ 0.03
CCDC68Q9H2F9 TMEM63A-209ENST00000537914 1018 ntTSL 1 (best) BASIC15.24■□□□□ 0.03
CCDC68Q9H2F9 AQP6-203ENST00000551733 849 ntTSL 3 BASIC15.24■□□□□ 0.03
CCDC68Q9H2F9 AL356481.3-201ENST00000630523 575 ntTSL 5 BASIC15.24■□□□□ 0.03
CCDC68Q9H2F9 AC005264.1-201ENST00000587587 2319 ntTSL 2 BASIC15.24■□□□□ 0.03
CCDC68Q9H2F9 ANAPC5-201ENST00000261819 2513 ntAPPRIS P1 TSL 1 (best) BASIC15.24■□□□□ 0.03
CCDC68Q9H2F9 PRODH2-201ENST00000301175 1677 ntAPPRIS P1 TSL 1 (best) BASIC15.24■□□□□ 0.03
CCDC68Q9H2F9 PI4K2A-201ENST00000370631 4189 ntAPPRIS P1 TSL 1 (best) BASIC15.24■□□□□ 0.03
CCDC68Q9H2F9 PIDD1-202ENST00000411829 2886 ntTSL 1 (best) BASIC15.24■□□□□ 0.03
CCDC68Q9H2F9 ACIN1-201ENST00000262710 4935 ntAPPRIS P3 TSL 1 (best) BASIC15.24■□□□□ 0.03
CCDC68Q9H2F9 C5orf38-207ENST00000515640 1441 ntAPPRIS ALT2 TSL 3 BASIC15.24■□□□□ 0.03
CCDC68Q9H2F9 CARHSP1-220ENST00000619881 2849 ntAPPRIS P1 TSL 3 BASIC15.24■□□□□ 0.03
CCDC68Q9H2F9 ZEB2-225ENST00000558170 4012 ntAPPRIS P2 TSL 1 (best) BASIC15.24■□□□□ 0.03
CCDC68Q9H2F9 SEPT7-202ENST00000399034 4399 ntTSL 5 BASIC15.24■□□□□ 0.03
CCDC68Q9H2F9 MCM7-202ENST00000343023 1968 ntTSL 1 (best) BASIC15.24■□□□□ 0.03
CCDC68Q9H2F9 TCEAL4-209ENST00000472745 1571 ntAPPRIS P3 TSL 5 BASIC15.24■□□□□ 0.03
CCDC68Q9H2F9 STAC3-206ENST00000554578 1580 ntTSL 1 (best) BASIC15.24■□□□□ 0.03
CCDC68Q9H2F9 KCNK4-TEX40-201ENST00000539086 2733 ntTSL 1 (best) BASIC15.23■□□□□ 0.03
CCDC68Q9H2F9 ZSCAN10-209ENST00000576985 2739 ntAPPRIS P1 TSL 5 BASIC15.23■□□□□ 0.03
CCDC68Q9H2F9 CICP23-201ENST00000605013 2741 ntBASIC15.23■□□□□ 0.03
CCDC68Q9H2F9 CICP24-201ENST00000605464 2705 ntBASIC15.23■□□□□ 0.03
CCDC68Q9H2F9 PRR12-203ENST00000615927 4479 ntAPPRIS ALT2 TSL 5 BASIC15.23■□□□□ 0.03
CCDC68Q9H2F9 RERE-204ENST00000400908 5790 ntAPPRIS P2 TSL 1 (best) BASIC15.23■□□□□ 0.03
CCDC68Q9H2F9 UHRF1-204ENST00000616255 2661 ntAPPRIS P1 TSL 1 (best) BASIC15.23■□□□□ 0.03
CCDC68Q9H2F9 CD209-207ENST00000593660 1497 ntAPPRIS ALT2 TSL 1 (best) BASIC15.23■□□□□ 0.03
CCDC68Q9H2F9 PDE8B-202ENST00000333194 2572 ntAPPRIS ALT2 TSL 1 (best) BASIC15.23■□□□□ 0.03
CCDC68Q9H2F9 WNK1-201ENST00000315939 10452 ntAPPRIS P3 TSL 1 (best) BASIC15.23■□□□□ 0.03
CCDC68Q9H2F9 H2BFWT-201ENST00000217926 894 ntAPPRIS P1 TSL 1 (best) BASIC15.23■□□□□ 0.03
CCDC68Q9H2F9 PKIG-202ENST00000372886 1180 ntAPPRIS P1 TSL 2 BASIC15.23■□□□□ 0.03
CCDC68Q9H2F9 PIR-201ENST00000380420 1282 ntAPPRIS P1 TSL 1 (best) BASIC15.23■□□□□ 0.03
CCDC68Q9H2F9 XXYLT1-204ENST00000429994 865 ntTSL 3 BASIC15.23■□□□□ 0.03
CCDC68Q9H2F9 TREX1-201ENST00000433541 1105 ntTSL 1 (best) BASIC15.23■□□□□ 0.03
CCDC68Q9H2F9 RHOA-206ENST00000454011 889 ntTSL 2 BASIC15.23■□□□□ 0.03
CCDC68Q9H2F9 CYMP-203ENST00000474680 1263 ntBASIC15.23■□□□□ 0.03
CCDC68Q9H2F9 HSPB7-207ENST00000487046 844 ntAPPRIS ALT1 TSL 1 (best) BASIC15.23■□□□□ 0.03
CCDC68Q9H2F9 AC104596.2-201ENST00000512793 793 ntBASIC15.23■□□□□ 0.03
CCDC68Q9H2F9 MRNIP-220ENST00000523084 1096 ntTSL 1 (best) BASIC15.23■□□□□ 0.03
CCDC68Q9H2F9 AC233702.7-201ENST00000536958 924 ntTSL 5 BASIC15.23■□□□□ 0.03
CCDC68Q9H2F9 AC138304.1-201ENST00000563841 424 ntTSL 3 BASIC15.23■□□□□ 0.03
CCDC68Q9H2F9 SECTM1-202ENST00000580437 1030 ntAPPRIS ALT2 TSL 2 BASIC15.23■□□□□ 0.03
CCDC68Q9H2F9 ERCC1-212ENST00000591636 836 ntTSL 2 BASIC15.23■□□□□ 0.03
CCDC68Q9H2F9 OSBPL5-210ENST00000525498 2733 ntTSL 2 BASIC15.23■□□□□ 0.03
CCDC68Q9H2F9 PARVB-201ENST00000338758 5429 ntAPPRIS P1 TSL 1 (best) BASIC15.23■□□□□ 0.03
CCDC68Q9H2F9 KIF1BP-214ENST00000638119 2537 ntTSL 5 BASIC15.23■□□□□ 0.03
CCDC68Q9H2F9 PDLIM5-202ENST00000318007 1960 ntTSL 1 (best) BASIC15.23■□□□□ 0.03
CCDC68Q9H2F9 DUOXA1-210ENST00000559014 1965 ntTSL 2 BASIC15.23■□□□□ 0.03
CCDC68Q9H2F9 CDH24-202ENST00000397359 3552 ntTSL 5 BASIC15.23■□□□□ 0.03
CCDC68Q9H2F9 PHF8-202ENST00000338154 6062 ntAPPRIS P3 TSL 1 (best) BASIC15.23■□□□□ 0.03
CCDC68Q9H2F9 SLCO6A1-205ENST00000506729 2689 ntAPPRIS P1 TSL 1 (best) BASIC15.23■□□□□ 0.03
CCDC68Q9H2F9 CDH20-203ENST00000538374 2683 ntAPPRIS P1 TSL 1 (best) BASIC15.23■□□□□ 0.03
CCDC68Q9H2F9 GPN1-201ENST00000264718 2496 ntAPPRIS P2 TSL 1 (best) BASIC15.23■□□□□ 0.03
CCDC68Q9H2F9 ZBED1-201ENST00000381218 2832 ntAPPRIS P1 TSL 1 (best) BASIC15.23■□□□□ 0.03
CCDC68Q9H2F9 COL1A2-201ENST00000297268 5411 ntAPPRIS P1 TSL 1 (best) BASIC15.23■□□□□ 0.03
CCDC68Q9H2F9 TPRX1-201ENST00000322175 1924 ntTSL 1 (best) BASIC15.23■□□□□ 0.03
CCDC68Q9H2F9 TFAM-204ENST00000487519 5414 ntAPPRIS P1 TSL 1 (best) BASIC15.23■□□□□ 0.03
CCDC68Q9H2F9 RALGDS-202ENST00000372050 3634 ntAPPRIS P3 TSL 1 (best) BASIC15.23■□□□□ 0.03
CCDC68Q9H2F9 CEP63-212ENST00000513612 2903 ntAPPRIS P3 TSL 2 BASIC15.23■□□□□ 0.03
CCDC68Q9H2F9 C20orf166-AS1-203ENST00000475015 2585 ntTSL 2 BASIC15.23■□□□□ 0.03
CCDC68Q9H2F9 HYAL1-209ENST00000618175 2225 ntAPPRIS P1 TSL 5 BASIC15.23■□□□□ 0.03
CCDC68Q9H2F9 GRIN2C-201ENST00000293190 4261 ntAPPRIS P3 TSL 1 (best) BASIC15.23■□□□□ 0.03
CCDC68Q9H2F9 RCSD1-206ENST00000537350 3044 ntAPPRIS ALT2 TSL 1 (best) BASIC15.22■□□□□ 0.03
CCDC68Q9H2F9 SERTAD2-201ENST00000313349 5549 ntAPPRIS P1 TSL 1 (best) BASIC15.22■□□□□ 0.03
CCDC68Q9H2F9 ADAMTS13-205ENST00000371916 4330 ntTSL 5 BASIC15.22■□□□□ 0.03
CCDC68Q9H2F9 REC8-209ENST00000611366 2331 ntAPPRIS P1 TSL 1 (best) BASIC15.22■□□□□ 0.03
CCDC68Q9H2F9 SNRPN-201ENST00000346403 1304 ntAPPRIS P1 TSL 5 BASIC15.22■□□□□ 0.03
CCDC68Q9H2F9 SNHG20-204ENST00000566583 1338 ntTSL 1 (best) BASIC15.22■□□□□ 0.03
CCDC68Q9H2F9 PNPLA6-201ENST00000221249 4617 ntAPPRIS P1 TSL 1 (best) BASIC15.22■□□□□ 0.03
CCDC68Q9H2F9 COMP-201ENST00000222271 2461 ntAPPRIS P1 TSL 1 (best) BASIC15.22■□□□□ 0.03
CCDC68Q9H2F9 TCP1-201ENST00000321394 2499 ntAPPRIS P1 TSL 1 (best) BASIC15.22■□□□□ 0.03
CCDC68Q9H2F9 IMPACT-201ENST00000284202 3792 ntAPPRIS P1 TSL 1 (best) BASIC15.22■□□□□ 0.03
CCDC68Q9H2F9 RCOR2-201ENST00000301459 2604 ntAPPRIS P1 TSL 1 (best) BASIC15.22■□□□□ 0.03
CCDC68Q9H2F9 GPR84-201ENST00000267015 1497 ntAPPRIS P1 TSL 1 (best) BASIC15.22■□□□□ 0.03
CCDC68Q9H2F9 CES4A-203ENST00000535696 1472 ntTSL 2 BASIC15.22■□□□□ 0.03
CCDC68Q9H2F9 FAM30A-205ENST00000630242 9612 ntTSL 2 BASIC15.22■□□□□ 0.03
CCDC68Q9H2F9 ZNF575-202ENST00000458714 2285 ntTSL 2 BASIC15.22■□□□□ 0.03
CCDC68Q9H2F9 AL137784.3-201ENST00000623858 2288 ntBASIC15.22■□□□□ 0.03
CCDC68Q9H2F9 RBFADN-204ENST00000568911 5187 ntTSL 2 BASIC15.22■□□□□ 0.03
CCDC68Q9H2F9 IFT52-201ENST00000373030 1757 ntAPPRIS P1 TSL 1 (best) BASIC15.22■□□□□ 0.03
CCDC68Q9H2F9 CDK17-201ENST00000261211 4157 ntAPPRIS P1 TSL 1 (best) BASIC15.22■□□□□ 0.03
CCDC68Q9H2F9 NAGK-201ENST00000244204 1154 ntAPPRIS P5 TSL 1 (best) BASIC15.22■□□□□ 0.03
CCDC68Q9H2F9 CIDEA-201ENST00000320477 828 ntAPPRIS P1 TSL 1 (best) BASIC15.22■□□□□ 0.03
CCDC68Q9H2F9 EIF5A-201ENST00000336452 1256 ntTSL 1 (best) BASIC15.22■□□□□ 0.03
CCDC68Q9H2F9 ATP1A1-AS1-202ENST00000369492 1011 ntTSL 1 (best) BASIC15.22■□□□□ 0.03
CCDC68Q9H2F9 LRP5L-201ENST00000402785 1193 ntAPPRIS P2 TSL 1 (best) BASIC15.22■□□□□ 0.03
CCDC68Q9H2F9 CGB8-201ENST00000448456 882 ntAPPRIS P1 TSL 1 (best) BASIC15.22■□□□□ 0.03
CCDC68Q9H2F9 BX322559.1-201ENST00000456613 319 ntTSL 3 BASIC15.22■□□□□ 0.03
CCDC68Q9H2F9 AC147067.1-201ENST00000466692 579 ntTSL 2 BASIC15.22■□□□□ 0.03
CCDC68Q9H2F9 RN7SL399P-201ENST00000471648 279 ntBASIC15.22■□□□□ 0.03
CCDC68Q9H2F9 RBAKDN-201ENST00000498308 514 ntTSL 1 (best) BASIC15.22■□□□□ 0.03
CCDC68Q9H2F9 TRAF3IP2-AS1-208ENST00000525151 609 ntTSL 1 (best) BASIC15.22■□□□□ 0.03
CCDC68Q9H2F9 PPHLN1-221ENST00000552761 1095 ntAPPRIS ALT2 TSL 1 (best) BASIC15.22■□□□□ 0.03
CCDC68Q9H2F9 GCHFR-203ENST00000558670 412 ntTSL 3 BASIC15.22■□□□□ 0.03
Retrieved 100 of 98,524 protein–RNA pairs in 58 ms