Protein–RNA interactions for Protein: Q9BWH6

RPAP1, RNA polymerase II-associated protein 1, humanhuman

Predicted RBP Predictions only

Length 1,393 aa.

Download Table  
Protein RNA Prediction (catRAPID) Interaction (ENCODE eCLIP)
Gene UniProt Accession Transcript Symbol Ensembl Transcript ID Length Transcript Status Prediction Score Prediction z-Score p-Value Fold Change
RPAP1Q9BWH6 PLD3-201ENST00000356508 1906 ntAPPRIS P1 TSL 1 (best) BASIC18.26■□□□□ 0.51
RPAP1Q9BWH6 LEF1-216ENST00000510624 1472 ntTSL 2 BASIC18.26■□□□□ 0.51
RPAP1Q9BWH6 AGTPBP1-201ENST00000337006 4473 ntTSL 5 BASIC18.26■□□□□ 0.51
RPAP1Q9BWH6 SEPT8-212ENST00000458488 1726 ntTSL 5 BASIC18.26■□□□□ 0.51
RPAP1Q9BWH6 AC005912.2-201ENST00000619492 2400 ntBASIC18.26■□□□□ 0.51
RPAP1Q9BWH6 CSAG1-202ENST00000370287 875 ntAPPRIS P2 TSL 1 (best) BASIC18.26■□□□□ 0.51
RPAP1Q9BWH6 PFDN6-202ENST00000374607 598 ntAPPRIS P1 TSL 2 BASIC18.26■□□□□ 0.51
RPAP1Q9BWH6 PFDN6-203ENST00000374610 521 ntAPPRIS P1 TSL 2 BASIC18.26■□□□□ 0.51
RPAP1Q9BWH6 AC008403.1-201ENST00000595676 443 ntAPPRIS P1 TSL 2 BASIC18.26■□□□□ 0.51
RPAP1Q9BWH6 AL358473.2-201ENST00000610411 556 ntTSL 4 BASIC18.26■□□□□ 0.51
RPAP1Q9BWH6 UPK1A-204ENST00000617999 1268 ntAPPRIS P1 TSL 5 BASIC18.26■□□□□ 0.51
RPAP1Q9BWH6 PPA1-206ENST00000625364 644 ntTSL 5 BASIC18.26■□□□□ 0.51
RPAP1Q9BWH6 SNRPN-202ENST00000390687 1528 ntAPPRIS P1 TSL 1 (best) BASIC18.26■□□□□ 0.51
RPAP1Q9BWH6 AL354989.2-201ENST00000435838 1540 ntBASIC18.26■□□□□ 0.51
RPAP1Q9BWH6 EPN2-201ENST00000314728 4871 ntAPPRIS P4 TSL 1 (best) BASIC18.26■□□□□ 0.51
RPAP1Q9BWH6 HDAC11-201ENST00000295757 2960 ntAPPRIS P3 TSL 1 (best) BASIC18.26■□□□□ 0.51
RPAP1Q9BWH6 CRYBG2-210ENST00000527815 2523 ntAPPRIS ALT2 TSL 2 BASIC18.26■□□□□ 0.51
RPAP1Q9BWH6 AL360270.3-201ENST00000609118 1348 ntBASIC18.26■□□□□ 0.51
RPAP1Q9BWH6 CALM1-216ENST00000626705 1341 ntTSL 5 BASIC18.26■□□□□ 0.51
RPAP1Q9BWH6 SLC4A3-201ENST00000273063 4246 ntTSL 1 (best) BASIC18.26■□□□□ 0.51
RPAP1Q9BWH6 KRTAP10-7-201ENST00000609664 1578 ntAPPRIS P1 BASIC18.26■□□□□ 0.51
RPAP1Q9BWH6 CYP4F3-203ENST00000586182 2338 ntAPPRIS ALT1 TSL 2 BASIC18.26■□□□□ 0.51
RPAP1Q9BWH6 TAF3-201ENST00000344293 4872 ntAPPRIS P1 TSL 1 (best) BASIC18.25■□□□□ 0.51
RPAP1Q9BWH6 WFIKKN2-202ENST00000426127 2193 ntTSL 2 BASIC18.25■□□□□ 0.51
RPAP1Q9BWH6 NOS2P2-202ENST00000639528 1659 ntTSL 1 (best) BASIC18.25■□□□□ 0.51
RPAP1Q9BWH6 E2F6-202ENST00000381525 3218 ntAPPRIS P1 TSL 1 (best) BASIC18.25■□□□□ 0.51
RPAP1Q9BWH6 C5orf38-207ENST00000515640 1441 ntAPPRIS ALT2 TSL 3 BASIC18.25■□□□□ 0.51
RPAP1Q9BWH6 RAD23B-201ENST00000358015 4119 ntAPPRIS P1 TSL 1 (best) BASIC18.25■□□□□ 0.51
RPAP1Q9BWH6 AC138028.6-201ENST00000616106 1482 ntBASIC18.25■□□□□ 0.51
RPAP1Q9BWH6 CCDC22-201ENST00000376227 2319 ntAPPRIS P1 TSL 1 (best) BASIC18.25■□□□□ 0.51
RPAP1Q9BWH6 TMTC2-201ENST00000321196 5681 ntAPPRIS P1 TSL 1 (best) BASIC18.25■□□□□ 0.51
RPAP1Q9BWH6 ZNF497-201ENST00000311044 3468 ntAPPRIS P1 TSL 2 BASIC18.25■□□□□ 0.51
RPAP1Q9BWH6 PQBP1-201ENST00000218224 1113 ntAPPRIS P1 TSL 1 (best) BASIC18.25■□□□□ 0.51
RPAP1Q9BWH6 PQBP1-202ENST00000247140 664 ntTSL 3 BASIC18.25■□□□□ 0.51
RPAP1Q9BWH6 FCGR1B-203ENST00000369384 1044 ntTSL 1 (best) BASIC18.25■□□□□ 0.51
RPAP1Q9BWH6 PQBP1-203ENST00000376563 1056 ntAPPRIS P1 TSL 2 BASIC18.25■□□□□ 0.51
RPAP1Q9BWH6 PQBP1-204ENST00000376566 760 ntTSL 3 BASIC18.25■□□□□ 0.51
RPAP1Q9BWH6 IGHV3-53-201ENST00000390627 571 ntAPPRIS P1 BASIC18.25■□□□□ 0.51
RPAP1Q9BWH6 PQBP1-205ENST00000396763 965 ntAPPRIS P1 TSL 5 BASIC18.25■□□□□ 0.51
RPAP1Q9BWH6 MPV17-205ENST00000402310 906 ntTSL 5 BASIC18.25■□□□□ 0.51
RPAP1Q9BWH6 PSTK-202ENST00000405485 1047 ntAPPRIS P2 TSL 2 BASIC18.25■□□□□ 0.51
RPAP1Q9BWH6 PRKG1-AS1-201ENST00000420193 971 ntTSL 3 BASIC18.25■□□□□ 0.51
RPAP1Q9BWH6 AL451065.1-201ENST00000428958 238 ntTSL 5 BASIC18.25■□□□□ 0.51
RPAP1Q9BWH6 HLA-K-203ENST00000430151 1046 ntBASIC18.25■□□□□ 0.51
RPAP1Q9BWH6 PQBP1-207ENST00000447146 1020 ntAPPRIS P1 TSL 1 (best) BASIC18.25■□□□□ 0.51
RPAP1Q9BWH6 ZNF527-203ENST00000483919 1142 ntTSL 1 (best) BASIC18.25■□□□□ 0.51
RPAP1Q9BWH6 DIO3OS-203ENST00000554441 1068 ntTSL 1 (best) BASIC18.25■□□□□ 0.51
RPAP1Q9BWH6 IGHV3OR16-9-202ENST00000558425 288 ntAPPRIS ALT2 BASIC18.25■□□□□ 0.51
RPAP1Q9BWH6 AC007861.2-201ENST00000573819 571 ntTSL 4 BASIC18.25■□□□□ 0.51
RPAP1Q9BWH6 ARL16-210ENST00000574938 751 ntTSL 2 BASIC18.25■□□□□ 0.51
RPAP1Q9BWH6 AC005597.1-201ENST00000588092 420 ntTSL 3 BASIC18.25■□□□□ 0.51
RPAP1Q9BWH6 RPS5-209ENST00000601521 1203 ntAPPRIS P1 TSL 5 BASIC18.25■□□□□ 0.51
RPAP1Q9BWH6 Metazoa_SRP.166-201ENST00000612530 253 ntBASIC18.25■□□□□ 0.51
RPAP1Q9BWH6 NMNAT3-201ENST00000296202 1569 ntAPPRIS P1 TSL 5 BASIC18.25■□□□□ 0.51
RPAP1Q9BWH6 AMPD2-218ENST00000528454 2728 ntTSL 2 BASIC18.25■□□□□ 0.51
RPAP1Q9BWH6 NTRK2-207ENST00000376214 5608 ntAPPRIS P3 TSL 5 BASIC18.25■□□□□ 0.51
RPAP1Q9BWH6 WASHC2C-209ENST00000540872 4519 ntAPPRIS ALT2 TSL 1 (best) BASIC18.25■□□□□ 0.51
RPAP1Q9BWH6 ZBTB17-201ENST00000375733 2770 ntAPPRIS ALT2 TSL 1 (best) BASIC18.25■□□□□ 0.51
RPAP1Q9BWH6 ZNF354C-201ENST00000315475 5411 ntAPPRIS P1 TSL 1 (best) BASIC18.25■□□□□ 0.51
RPAP1Q9BWH6 PCMTD2-207ENST00000609372 1321 ntTSL 4 BASIC18.25■□□□□ 0.51
RPAP1Q9BWH6 MAEL-202ENST00000367872 1908 ntAPPRIS P1 TSL 1 (best) BASIC18.25■□□□□ 0.51
RPAP1Q9BWH6 STIP1-207ENST00000538945 1900 ntTSL 2 BASIC18.25■□□□□ 0.51
RPAP1Q9BWH6 SMAD4-201ENST00000342988 8769 ntAPPRIS P1 TSL 5 BASIC18.25■□□□□ 0.51
RPAP1Q9BWH6 PBX3-203ENST00000373487 2902 ntTSL 5 BASIC18.25■□□□□ 0.51
RPAP1Q9BWH6 TP53I11-208ENST00000525680 2647 ntAPPRIS P1 TSL 2 BASIC18.25■□□□□ 0.51
RPAP1Q9BWH6 FRMD5-209ENST00000484674 2319 ntTSL 2 BASIC18.25■□□□□ 0.51
RPAP1Q9BWH6 KRT20-201ENST00000167588 1737 ntAPPRIS P1 TSL 1 (best) BASIC18.24■□□□□ 0.51
RPAP1Q9BWH6 DHFR-201ENST00000439211 3917 ntAPPRIS P1 TSL 1 (best) BASIC18.24■□□□□ 0.51
RPAP1Q9BWH6 PXN-201ENST00000228307 3785 ntAPPRIS P4 TSL 1 (best) BASIC18.24■□□□□ 0.51
RPAP1Q9BWH6 SLC4A9-203ENST00000506545 2838 ntTSL 1 (best) BASIC18.24■□□□□ 0.51
RPAP1Q9BWH6 UBR3-203ENST00000418381 7951 ntAPPRIS P1 TSL 5 BASIC18.24■□□□□ 0.51
RPAP1Q9BWH6 C5orf30-202ENST00000510890 2933 ntAPPRIS P1 TSL 2 BASIC18.24■□□□□ 0.51
RPAP1Q9BWH6 STAT5A-201ENST00000345506 4301 ntAPPRIS P1 TSL 1 (best) BASIC18.24■□□□□ 0.51
RPAP1Q9BWH6 ZNF575-202ENST00000458714 2285 ntTSL 2 BASIC18.24■□□□□ 0.51
RPAP1Q9BWH6 LINC02273-201ENST00000499452 1592 ntTSL 1 (best) BASIC18.24■□□□□ 0.51
RPAP1Q9BWH6 TAF1C-216ENST00000566732 2972 ntAPPRIS ALT2 TSL 2 BASIC18.24■□□□□ 0.51
RPAP1Q9BWH6 KATNA1-203ENST00000367411 1984 ntAPPRIS P1 TSL 2 BASIC18.24■□□□□ 0.51
RPAP1Q9BWH6 OIT3-202ENST00000622652 1602 ntTSL 1 (best) BASIC18.24■□□□□ 0.51
RPAP1Q9BWH6 C8orf74-201ENST00000304519 1036 ntAPPRIS P2 TSL 1 (best) BASIC18.24■□□□□ 0.51
RPAP1Q9BWH6 NOL4L-202ENST00000326071 701 ntTSL 1 (best) BASIC18.24■□□□□ 0.51
RPAP1Q9BWH6 C1orf43-205ENST00000368519 1163 ntTSL 2 BASIC18.24■□□□□ 0.51
RPAP1Q9BWH6 VAMP1-203ENST00000400911 1068 ntTSL 1 (best) BASIC18.24■□□□□ 0.51
RPAP1Q9BWH6 AC007731.4-201ENST00000420225 652 ntTSL 2 BASIC18.24■□□□□ 0.51
RPAP1Q9BWH6 AC079178.1-201ENST00000420915 656 ntBASIC18.24■□□□□ 0.51
RPAP1Q9BWH6 AC233976.1-201ENST00000425150 451 ntTSL 3 BASIC18.24■□□□□ 0.51
RPAP1Q9BWH6 LAMA5-AS1-203ENST00000478167 690 ntTSL 3 BASIC18.24■□□□□ 0.51
RPAP1Q9BWH6 NIP7-208ENST00000569637 1099 ntTSL 2 BASIC18.24■□□□□ 0.51
RPAP1Q9BWH6 LEF1-202ENST00000379951 3477 ntTSL 1 (best) BASIC18.24■□□□□ 0.51
RPAP1Q9BWH6 CENPBD1P1-204ENST00000487264 1308 ntTSL 1 (best) BASIC18.24■□□□□ 0.51
RPAP1Q9BWH6 ARPP19-202ENST00000561650 3245 ntTSL 2 BASIC18.24■□□□□ 0.51
RPAP1Q9BWH6 PRF1-201ENST00000373209 2492 ntAPPRIS P1 TSL 1 (best) BASIC18.24■□□□□ 0.51
RPAP1Q9BWH6 ATP2A2-204ENST00000539276 4094 ntAPPRIS P4 TSL 1 (best) BASIC18.24■□□□□ 0.51
RPAP1Q9BWH6 MCF2L-203ENST00000375604 6445 ntAPPRIS P3 TSL 2 BASIC18.24■□□□□ 0.51
RPAP1Q9BWH6 LY9-204ENST00000368039 1364 ntTSL 1 (best) BASIC18.24■□□□□ 0.51
RPAP1Q9BWH6 HVCN1-202ENST00000356742 2189 ntAPPRIS P1 TSL 1 (best) BASIC18.24■□□□□ 0.51
RPAP1Q9BWH6 LRRTM1-201ENST00000295057 2599 ntAPPRIS P1 TSL 1 (best) BASIC18.24■□□□□ 0.51
RPAP1Q9BWH6 ELAC1-201ENST00000269466 2235 ntAPPRIS P1 TSL 1 (best) BASIC18.24■□□□□ 0.51
RPAP1Q9BWH6 PVR-203ENST00000403059 3078 ntAPPRIS ALT2 TSL 2 BASIC18.24■□□□□ 0.51
RPAP1Q9BWH6 MCM3AP-AS1-203ENST00000421927 2280 ntTSL 2 BASIC18.24■□□□□ 0.51
RPAP1Q9BWH6 MAGI1-213ENST00000483466 4791 ntAPPRIS P3 TSL 1 (best) BASIC18.24■□□□□ 0.51
Retrieved 100 of 98,524 protein–RNA pairs in 42.6 ms