Protein–RNA interactions for Protein: Q9BU40

CHRDL1, Chordin-like protein 1, humanhuman

Predictions only

Length 450 aa.

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Protein RNA Prediction (catRAPID) Interaction (ENCODE eCLIP)
Gene UniProt Accession Transcript Symbol Ensembl Transcript ID Length Transcript Status Prediction Score Prediction z-Score p-Value Fold Change
CHRDL1Q9BU40 AKAP1-201ENST00000314126 2380 ntTSL 1 (best) BASIC12.11□□□□□ -0.47
CHRDL1Q9BU40 EID1-201ENST00000530028 2298 ntAPPRIS P1 BASIC12.11□□□□□ -0.47
CHRDL1Q9BU40 PRMT2-202ENST00000334494 1334 ntTSL 1 (best) BASIC12.11□□□□□ -0.47
CHRDL1Q9BU40 SERHL2-203ENST00000340239 1315 ntTSL 5 BASIC12.11□□□□□ -0.47
CHRDL1Q9BU40 MLPH-204ENST00000410032 2171 ntAPPRIS ALT2 TSL 2 BASIC12.11□□□□□ -0.47
CHRDL1Q9BU40 RER1-203ENST00000378513 3000 ntTSL 3 BASIC12.11□□□□□ -0.47
CHRDL1Q9BU40 RSBN1L-201ENST00000334955 6422 ntAPPRIS P2 TSL 1 (best) BASIC12.11□□□□□ -0.47
CHRDL1Q9BU40 MARS-201ENST00000262027 2905 ntAPPRIS P1 TSL 1 (best) BASIC12.1□□□□□ -0.47
CHRDL1Q9BU40 TACR2-201ENST00000373306 2083 ntAPPRIS P1 TSL 1 (best) BASIC12.1□□□□□ -0.47
CHRDL1Q9BU40 ZHX1-202ENST00000395571 5108 ntAPPRIS P1 TSL 1 (best) BASIC12.1□□□□□ -0.47
CHRDL1Q9BU40 ARAP1-202ENST00000359373 5767 ntAPPRIS ALT2 TSL 2 BASIC12.1□□□□□ -0.47
CHRDL1Q9BU40 RAPSN-201ENST00000298854 1671 ntAPPRIS P1 TSL 1 (best) BASIC12.1□□□□□ -0.47
CHRDL1Q9BU40 SLC22A12-203ENST00000377572 2887 ntTSL 1 (best) BASIC12.1□□□□□ -0.47
CHRDL1Q9BU40 LAP3-201ENST00000226299 2213 ntAPPRIS P1 TSL 1 (best) BASIC12.1□□□□□ -0.47
CHRDL1Q9BU40 DDX55-203ENST00000421670 1574 ntTSL 1 (best) BASIC12.1□□□□□ -0.47
CHRDL1Q9BU40 CEP68-202ENST00000377990 5847 ntAPPRIS P3 TSL 1 (best) BASIC12.1□□□□□ -0.47
CHRDL1Q9BU40 KATNB1-201ENST00000379661 2664 ntAPPRIS P1 TSL 5 BASIC12.1□□□□□ -0.47
CHRDL1Q9BU40 LPO-210ENST00000582328 2680 ntAPPRIS ALT2 TSL 5 BASIC12.1□□□□□ -0.47
CHRDL1Q9BU40 DNMT3B-204ENST00000353855 4237 ntTSL 5 BASIC12.1□□□□□ -0.47
CHRDL1Q9BU40 NCOR2-204ENST00000405201 8533 ntAPPRIS P4 TSL 1 (best) BASIC12.1□□□□□ -0.47
CHRDL1Q9BU40 GDPD3-202ENST00000406256 1397 ntAPPRIS P1 TSL 1 (best) BASIC12.1□□□□□ -0.47
CHRDL1Q9BU40 PRMT2-207ENST00000440086 1932 ntTSL 1 (best) BASIC12.1□□□□□ -0.47
CHRDL1Q9BU40 DUSP26-203ENST00000523956 1373 ntAPPRIS P1 TSL 5 BASIC12.1□□□□□ -0.47
CHRDL1Q9BU40 CNTFR-204ENST00000610543 1926 ntAPPRIS P1 TSL 5 BASIC12.1□□□□□ -0.47
CHRDL1Q9BU40 ATP6V1H-201ENST00000355221 2365 ntTSL 1 (best) BASIC12.1□□□□□ -0.47
CHRDL1Q9BU40 ADCYAP1R1-207ENST00000614107 6575 ntAPPRIS ALT2 TSL 5 BASIC12.1□□□□□ -0.47
CHRDL1Q9BU40 MAMSTR-201ENST00000318083 1837 ntAPPRIS P1 TSL 2 BASIC12.1□□□□□ -0.47
CHRDL1Q9BU40 CTSA-202ENST00000354880 1820 ntTSL 2 BASIC12.1□□□□□ -0.47
CHRDL1Q9BU40 C2orf40-201ENST00000238044 789 ntAPPRIS P1 TSL 1 (best) BASIC12.1□□□□□ -0.47
CHRDL1Q9BU40 S100A14-204ENST00000368702 1218 ntAPPRIS P1 TSL 3 BASIC12.1□□□□□ -0.47
CHRDL1Q9BU40 CXCL12-206ENST00000395795 404 ntTSL 5 BASIC12.1□□□□□ -0.47
CHRDL1Q9BU40 AKIP1-204ENST00000396648 1084 ntAPPRIS ALT2 TSL 2 BASIC12.1□□□□□ -0.47
CHRDL1Q9BU40 HNRNPA3P1-201ENST00000401429 1139 ntBASIC12.1□□□□□ -0.47
CHRDL1Q9BU40 RNASE10-202ENST00000430083 1172 ntTSL 2 BASIC12.1□□□□□ -0.47
CHRDL1Q9BU40 RPL13P2-201ENST00000440687 659 ntBASIC12.1□□□□□ -0.47
CHRDL1Q9BU40 AL034550.1-201ENST00000442179 986 ntTSL 1 (best) BASIC12.1□□□□□ -0.47
CHRDL1Q9BU40 HNRNPA3P5-201ENST00000455201 833 ntBASIC12.1□□□□□ -0.47
CHRDL1Q9BU40 S100A14-206ENST00000476873 1025 ntAPPRIS P1 TSL 1 (best) BASIC12.1□□□□□ -0.47
CHRDL1Q9BU40 C4orf3-202ENST00000504110 667 ntAPPRIS P3 TSL 1 (best) BASIC12.1□□□□□ -0.47
CHRDL1Q9BU40 SDHAP3-202ENST00000515467 728 ntBASIC12.1□□□□□ -0.47
CHRDL1Q9BU40 IGHV3-42-201ENST00000520410 361 ntBASIC12.1□□□□□ -0.47
CHRDL1Q9BU40 AC137894.1-201ENST00000526431 547 ntTSL 2 BASIC12.1□□□□□ -0.47
CHRDL1Q9BU40 MAPKAPK5-203ENST00000547305 494 ntTSL 2 BASIC12.1□□□□□ -0.47
CHRDL1Q9BU40 AC044860.1-202ENST00000559481 777 ntBASIC12.1□□□□□ -0.47
CHRDL1Q9BU40 AC104985.1-201ENST00000587528 507 ntTSL 3 BASIC12.1□□□□□ -0.47
CHRDL1Q9BU40 MZF1-202ENST00000594108 1110 ntTSL 1 (best) BASIC12.1□□□□□ -0.47
CHRDL1Q9BU40 ZNF550-208ENST00000601415 515 ntTSL 4 BASIC12.1□□□□□ -0.47
CHRDL1Q9BU40 AC074044.1-201ENST00000609673 707 ntBASIC12.1□□□□□ -0.47
CHRDL1Q9BU40 PCSK6-221ENST00000632686 1210 ntTSL 5 BASIC12.1□□□□□ -0.47
CHRDL1Q9BU40 RAB34-223ENST00000636154 730 ntTSL 2 BASIC12.1□□□□□ -0.47
CHRDL1Q9BU40 CLN3-255ENST00000637100 1284 ntTSL 5 BASIC12.1□□□□□ -0.47
CHRDL1Q9BU40 SCAP-206ENST00000428413 3749 ntTSL 5 BASIC12.1□□□□□ -0.47
CHRDL1Q9BU40 NUP93-201ENST00000308159 2741 ntAPPRIS P1 TSL 1 (best) BASIC12.1□□□□□ -0.47
CHRDL1Q9BU40 CCR7-201ENST00000246657 2173 ntAPPRIS P1 TSL 1 (best) BASIC12.1□□□□□ -0.47
CHRDL1Q9BU40 CCT3-201ENST00000295688 2150 ntAPPRIS P1 TSL 1 (best) BASIC12.1□□□□□ -0.47
CHRDL1Q9BU40 SLC34A2-203ENST00000504570 2162 ntAPPRIS ALT2 TSL 1 (best) BASIC12.1□□□□□ -0.47
CHRDL1Q9BU40 YTHDF3-209ENST00000617200 5076 ntTSL 5 BASIC12.1□□□□□ -0.47
CHRDL1Q9BU40 GATA3-202ENST00000379328 3078 ntAPPRIS ALT1 TSL 1 (best) BASIC12.1□□□□□ -0.47
CHRDL1Q9BU40 TNNI1-202ENST00000361379 5413 ntAPPRIS P2 TSL 5 BASIC12.1□□□□□ -0.47
CHRDL1Q9BU40 TXLNA-201ENST00000373609 5012 ntAPPRIS P1 TSL 1 (best) BASIC12.1□□□□□ -0.47
CHRDL1Q9BU40 TUBA3E-201ENST00000312988 1542 ntAPPRIS P1 TSL 1 (best) BASIC12.1□□□□□ -0.47
CHRDL1Q9BU40 SLC44A2-201ENST00000335757 3671 ntAPPRIS P1 TSL 1 (best) BASIC12.1□□□□□ -0.47
CHRDL1Q9BU40 AP004608.1-203ENST00000528482 3679 ntTSL 5 BASIC12.1□□□□□ -0.47
CHRDL1Q9BU40 AMBP-201ENST00000265132 1434 ntAPPRIS P1 TSL 1 (best) BASIC12.1□□□□□ -0.47
CHRDL1Q9BU40 AC100757.3-201ENST00000622361 1406 ntBASIC12.1□□□□□ -0.47
CHRDL1Q9BU40 GAS2L1-209ENST00000618518 3382 ntAPPRIS P1 TSL 2 BASIC12.1□□□□□ -0.47
CHRDL1Q9BU40 LINC00841-201ENST00000451929 2126 ntTSL 2 BASIC12.1□□□□□ -0.47
CHRDL1Q9BU40 AL359183.1-201ENST00000623796 2132 ntBASIC12.1□□□□□ -0.47
CHRDL1Q9BU40 NUTM2A-202ENST00000381707 3290 ntAPPRIS P2 TSL 1 (best) BASIC12.1□□□□□ -0.47
CHRDL1Q9BU40 NUTM2B-203ENST00000429828 3292 ntAPPRIS P2 TSL 5 BASIC12.1□□□□□ -0.47
CHRDL1Q9BU40 AC087499.5-201ENST00000452760 1342 ntBASIC12.1□□□□□ -0.47
CHRDL1Q9BU40 RAD51C-215ENST00000583539 1319 ntAPPRIS ALT2 TSL 2 BASIC12.1□□□□□ -0.47
CHRDL1Q9BU40 IRAK4-212ENST00000551736 1684 ntAPPRIS P1 TSL 1 (best) BASIC12.1□□□□□ -0.47
CHRDL1Q9BU40 TBC1D1-219ENST00000615497 2383 ntTSL 2 BASIC12.1□□□□□ -0.47
CHRDL1Q9BU40 JMJD6-208ENST00000617192 5517 ntTSL 5 BASIC12.09□□□□□ -0.47
CHRDL1Q9BU40 NEDD4L-202ENST00000356462 3335 ntTSL 1 (best) BASIC12.09□□□□□ -0.47
CHRDL1Q9BU40 AGT-201ENST00000366667 2291 ntAPPRIS P1 TSL 1 (best) BASIC12.09□□□□□ -0.47
CHRDL1Q9BU40 TCOF1-202ENST00000377797 5095 ntAPPRIS ALT2 TSL 5 BASIC12.09□□□□□ -0.47
CHRDL1Q9BU40 AC005252.3-201ENST00000623855 2258 ntBASIC12.09□□□□□ -0.47
CHRDL1Q9BU40 RPS6KC1-208ENST00000614059 4188 ntTSL 1 (best) BASIC12.09□□□□□ -0.47
CHRDL1Q9BU40 OLFML2A-203ENST00000373580 6425 ntAPPRIS P3 TSL 1 (best) BASIC12.09□□□□□ -0.47
CHRDL1Q9BU40 AGL-203ENST00000361915 7368 ntAPPRIS P1 TSL 1 (best) BASIC12.09□□□□□ -0.47
CHRDL1Q9BU40 LONP1-202ENST00000540670 3002 ntTSL 2 BASIC12.09□□□□□ -0.47
CHRDL1Q9BU40 ARHGAP27-203ENST00000428638 4242 ntAPPRIS P2 TSL 5 BASIC12.09□□□□□ -0.47
CHRDL1Q9BU40 ALG9-201ENST00000398006 2345 ntTSL 1 (best) BASIC12.09□□□□□ -0.47
CHRDL1Q9BU40 PHF19-203ENST00000419155 3525 ntTSL 2 BASIC12.09□□□□□ -0.47
CHRDL1Q9BU40 TMEM104-201ENST00000335464 4745 ntAPPRIS P1 TSL 1 (best) BASIC12.09□□□□□ -0.47
CHRDL1Q9BU40 CABP4-201ENST00000325656 2559 ntAPPRIS P1 TSL 1 (best) BASIC12.09□□□□□ -0.47
CHRDL1Q9BU40 CICP11-201ENST00000434745 2827 ntBASIC12.09□□□□□ -0.47
CHRDL1Q9BU40 NR1H3-211ENST00000441012 1637 ntAPPRIS P1 TSL 1 (best) BASIC12.09□□□□□ -0.47
CHRDL1Q9BU40 AP3M2-201ENST00000174653 3661 ntAPPRIS P1 TSL 5 BASIC12.09□□□□□ -0.47
CHRDL1Q9BU40 VPS9D1-201ENST00000389386 2748 ntAPPRIS P2 TSL 1 (best) BASIC12.09□□□□□ -0.47
CHRDL1Q9BU40 CCL25-201ENST00000253451 953 ntAPPRIS ALT2 TSL 2 BASIC12.09□□□□□ -0.47
CHRDL1Q9BU40 AC093702.1-201ENST00000423433 367 ntTSL 3 BASIC12.09□□□□□ -0.47
CHRDL1Q9BU40 PON3-203ENST00000427422 894 ntTSL 3 BASIC12.09□□□□□ -0.47
CHRDL1Q9BU40 AL133481.1-201ENST00000438554 511 ntTSL 5 BASIC12.09□□□□□ -0.47
CHRDL1Q9BU40 PIGZ-204ENST00000443835 675 ntTSL 4 BASIC12.09□□□□□ -0.47
CHRDL1Q9BU40 AL109811.2-201ENST00000447600 487 ntTSL 3 BASIC12.09□□□□□ -0.47
CHRDL1Q9BU40 AL359815.1-201ENST00000457706 821 ntTSL 2 BASIC12.09□□□□□ -0.47
CHRDL1Q9BU40 AC092910.3-202ENST00000469070 982 ntTSL 3 BASIC12.09□□□□□ -0.47
Retrieved 100 of 98,524 protein–RNA pairs in 53.7 ms