Protein–RNA interactions for Protein: Q96P20

NLRP3, NACHT, LRR and PYD domains-containing protein 3, humanhuman

Predictions only

Length 1,036 aa.

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Protein RNA Prediction (catRAPID) Interaction (ENCODE eCLIP)
Gene UniProt Accession Transcript Symbol Ensembl Transcript ID Length Transcript Status Prediction Score Prediction z-Score p-Value Fold Change
NLRP3Q96P20 AC026316.1-201ENST00000398900 414 ntBASIC18.47■□□□□ 0.55
NLRP3Q96P20 TEX33-202ENST00000402860 986 ntAPPRIS P3 TSL 1 (best) BASIC18.47■□□□□ 0.55
NLRP3Q96P20 AL157407.1-201ENST00000435784 904 ntBASIC18.47■□□□□ 0.55
NLRP3Q96P20 AL035414.1-201ENST00000451327 857 ntBASIC18.47■□□□□ 0.55
NLRP3Q96P20 SAP25-201ENST00000538735 837 ntAPPRIS P2 TSL 3 BASIC18.47■□□□□ 0.55
NLRP3Q96P20 AC018635.2-201ENST00000608625 364 ntBASIC18.47■□□□□ 0.55
NLRP3Q96P20 AC103691.2-201ENST00000618824 433 ntBASIC18.47■□□□□ 0.55
NLRP3Q96P20 CDK7-214ENST00000626796 358 ntTSL 5 BASIC18.47■□□□□ 0.55
NLRP3Q96P20 CDK7-215ENST00000629350 1149 ntTSL 5 BASIC18.47■□□□□ 0.55
NLRP3Q96P20 FP565260.6-204ENST00000620528 1640 ntAPPRIS P1 TSL 1 (best) BASIC18.47■□□□□ 0.55
NLRP3Q96P20 PHRF1-203ENST00000416188 5227 ntAPPRIS P3 TSL 1 (best) BASIC18.47■□□□□ 0.55
NLRP3Q96P20 MAX-204ENST00000358402 1973 ntTSL 1 (best) BASIC18.47■□□□□ 0.55
NLRP3Q96P20 ADAM15-228ENST00000531455 2678 ntAPPRIS ALT2 TSL 2 BASIC18.47■□□□□ 0.55
NLRP3Q96P20 PLPPR2-201ENST00000251473 2727 ntAPPRIS P3 TSL 1 (best) BASIC18.47■□□□□ 0.55
NLRP3Q96P20 NR4A1-213ENST00000550082 2029 ntTSL 5 BASIC18.47■□□□□ 0.55
NLRP3Q96P20 ADGRA1-AS1-201ENST00000366099 3236 ntBASIC18.47■□□□□ 0.55
NLRP3Q96P20 TMEM258-207ENST00000543510 1692 ntTSL 2 BASIC18.47■□□□□ 0.55
NLRP3Q96P20 DIABLO-201ENST00000267169 1316 ntTSL 1 (best) BASIC18.47■□□□□ 0.55
NLRP3Q96P20 AC092978.1-201ENST00000474979 1309 ntTSL 5 BASIC18.47■□□□□ 0.55
NLRP3Q96P20 UBE2V2-205ENST00000521346 1322 ntTSL 3 BASIC18.47■□□□□ 0.55
NLRP3Q96P20 AC092978.1-202ENST00000637590 1327 ntBASIC18.47■□□□□ 0.55
NLRP3Q96P20 ARFGAP1-201ENST00000353546 2776 ntAPPRIS P4 TSL 1 (best) BASIC18.47■□□□□ 0.55
NLRP3Q96P20 CTSL-203ENST00000343150 2177 ntAPPRIS P1 TSL 1 (best) BASIC18.47■□□□□ 0.55
NLRP3Q96P20 PPP1R26-205ENST00000605286 4744 ntAPPRIS P1 TSL 3 BASIC18.47■□□□□ 0.55
NLRP3Q96P20 KLC4-202ENST00000347162 2404 ntAPPRIS ALT2 TSL 1 (best) BASIC18.47■□□□□ 0.55
NLRP3Q96P20 ALOX15-205ENST00000574640 2422 ntTSL 2 BASIC18.47■□□□□ 0.55
NLRP3Q96P20 KLC1-206ENST00000389744 3250 ntTSL 1 (best) BASIC18.47■□□□□ 0.55
NLRP3Q96P20 UNC13A-205ENST00000551649 6052 ntAPPRIS ALT2 TSL 5 BASIC18.46■□□□□ 0.55
NLRP3Q96P20 ZNF821-203ENST00000446827 1822 ntTSL 1 (best) BASIC18.46■□□□□ 0.55
NLRP3Q96P20 MOB3B-201ENST00000262244 6454 ntAPPRIS P1 TSL 1 (best) BASIC18.46■□□□□ 0.55
NLRP3Q96P20 TNIP1-219ENST00000524280 1716 ntTSL 1 (best) BASIC18.46■□□□□ 0.55
NLRP3Q96P20 TM9SF1-201ENST00000261789 2452 ntAPPRIS P1 TSL 1 (best) BASIC18.46■□□□□ 0.55
NLRP3Q96P20 ZBTB47-202ENST00000505904 2456 ntTSL 5 BASIC18.46■□□□□ 0.55
NLRP3Q96P20 TRIM45-203ENST00000369464 3495 ntTSL 1 (best) BASIC18.46■□□□□ 0.55
NLRP3Q96P20 B3GALNT1-203ENST00000392781 3606 ntAPPRIS P1 TSL 1 (best) BASIC18.46■□□□□ 0.55
NLRP3Q96P20 HNRNPU-205ENST00000444376 6827 ntAPPRIS P3 TSL 1 (best) BASIC18.46■□□□□ 0.55
NLRP3Q96P20 RNPS1-220ENST00000566458 2037 ntTSL 1 (best) BASIC18.46■□□□□ 0.55
NLRP3Q96P20 STAT6-225ENST00000640254 2037 ntTSL 5 BASIC18.46■□□□□ 0.55
NLRP3Q96P20 HDAC5-201ENST00000225983 5326 ntAPPRIS P3 TSL 5 BASIC18.46■□□□□ 0.55
NLRP3Q96P20 HAUS3-204ENST00000506763 3166 ntTSL 2 BASIC18.46■□□□□ 0.55
NLRP3Q96P20 SGCE-205ENST00000437425 1508 ntTSL 2 BASIC18.46■□□□□ 0.55
NLRP3Q96P20 BMP3-201ENST00000282701 5734 ntAPPRIS P1 TSL 1 (best) BASIC18.46■□□□□ 0.55
NLRP3Q96P20 IER3-201ENST00000259874 1244 ntAPPRIS P1 TSL 1 (best) BASIC18.46■□□□□ 0.55
NLRP3Q96P20 RPS16-202ENST00000339471 643 ntTSL 1 (best) BASIC18.46■□□□□ 0.55
NLRP3Q96P20 NUP210P1-201ENST00000357061 876 ntTSL 1 (best) BASIC18.46■□□□□ 0.55
NLRP3Q96P20 LYPLA2-202ENST00000374502 1072 ntTSL 2 BASIC18.46■□□□□ 0.55
NLRP3Q96P20 AC093151.3-202ENST00000445073 709 ntTSL 3 BASIC18.46■□□□□ 0.55
NLRP3Q96P20 AC010973.2-201ENST00000485974 1230 ntTSL 2 BASIC18.46■□□□□ 0.55
NLRP3Q96P20 HOXA10-AS-202ENST00000519935 1161 ntTSL 3 BASIC18.46■□□□□ 0.55
NLRP3Q96P20 LINC01848-201ENST00000523446 518 ntTSL 3 BASIC18.46■□□□□ 0.55
NLRP3Q96P20 BHMT-206ENST00000524080 1207 ntTSL 2 BASIC18.46■□□□□ 0.55
NLRP3Q96P20 AL132639.2-202ENST00000553520 467 ntTSL 2 BASIC18.46■□□□□ 0.55
NLRP3Q96P20 ELOF1-202ENST00000586120 658 ntAPPRIS P1 TSL 3 BASIC18.46■□□□□ 0.55
NLRP3Q96P20 BRD2-201ENST00000374825 4894 ntAPPRIS P3 TSL 1 (best) BASIC18.46■□□□□ 0.55
NLRP3Q96P20 SGCE-204ENST00000428696 1409 ntTSL 1 (best) BASIC18.46■□□□□ 0.55
NLRP3Q96P20 TBC1D3J-201ENST00000620719 1426 ntBASIC18.46■□□□□ 0.55
NLRP3Q96P20 MAP2K7-201ENST00000397979 3361 ntAPPRIS P3 TSL 1 (best) BASIC18.46■□□□□ 0.55
NLRP3Q96P20 CACNA1H-206ENST00000565831 7815 ntAPPRIS ALT2 TSL 1 (best) BASIC18.46■□□□□ 0.55
NLRP3Q96P20 TBXAS1-208ENST00000448866 1963 ntAPPRIS P1 TSL 1 (best) BASIC18.46■□□□□ 0.55
NLRP3Q96P20 SH3RF1-201ENST00000284637 5272 ntAPPRIS P1 TSL 1 (best) BASIC18.46■□□□□ 0.55
NLRP3Q96P20 SLC13A5-208ENST00000573648 1723 ntTSL 1 (best) BASIC18.46■□□□□ 0.55
NLRP3Q96P20 MBD1-224ENST00000591416 4905 ntAPPRIS P3 TSL 5 BASIC18.46■□□□□ 0.55
NLRP3Q96P20 KRT8P21-201ENST00000430398 1491 ntBASIC18.46■□□□□ 0.54
NLRP3Q96P20 SIPA1-201ENST00000394224 3628 ntAPPRIS P1 TSL 1 (best) BASIC18.46■□□□□ 0.54
NLRP3Q96P20 KCNT1-202ENST00000371757 4717 ntAPPRIS P3 TSL 1 (best) BASIC18.45■□□□□ 0.54
NLRP3Q96P20 OLIG2-201ENST00000333337 3262 ntAPPRIS P1 BASIC18.45■□□□□ 0.54
NLRP3Q96P20 RASAL3-201ENST00000343625 3293 ntAPPRIS P2 TSL 2 BASIC18.45■□□□□ 0.54
NLRP3Q96P20 CKMT1B-201ENST00000300283 1779 ntAPPRIS P1 TSL 5 BASIC18.45■□□□□ 0.54
NLRP3Q96P20 CKMT1A-204ENST00000434505 1779 ntAPPRIS P1 TSL 5 BASIC18.45■□□□□ 0.54
NLRP3Q96P20 GLUD1-201ENST00000277865 3039 ntAPPRIS P1 TSL 1 (best) BASIC18.45■□□□□ 0.54
NLRP3Q96P20 NIT1-203ENST00000368009 1362 ntAPPRIS P3 TSL 1 (best) BASIC18.45■□□□□ 0.54
NLRP3Q96P20 TOB1-AS1-201ENST00000416263 1351 ntTSL 1 (best) BASIC18.45■□□□□ 0.54
NLRP3Q96P20 RRP1-207ENST00000497547 3022 ntAPPRIS P1 TSL 1 (best) BASIC18.45■□□□□ 0.54
NLRP3Q96P20 NR1H3-235ENST00000616973 1919 ntTSL 1 (best) BASIC18.45■□□□□ 0.54
NLRP3Q96P20 ITGA9-201ENST00000264741 7889 ntAPPRIS P1 TSL 1 (best) BASIC18.45■□□□□ 0.54
NLRP3Q96P20 STX1A-201ENST00000222812 2095 ntAPPRIS P1 TSL 1 (best) BASIC18.45■□□□□ 0.54
NLRP3Q96P20 STX1A-204ENST00000395156 2050 ntTSL 1 (best) BASIC18.45■□□□□ 0.54
NLRP3Q96P20 DMTN-223ENST00000523782 2235 ntAPPRIS P1 TSL 5 BASIC18.45■□□□□ 0.54
NLRP3Q96P20 REM1-201ENST00000201979 1665 ntAPPRIS P1 TSL 1 (best) BASIC18.45■□□□□ 0.54
NLRP3Q96P20 FDX1-201ENST00000260270 3206 ntAPPRIS P1 TSL 1 (best) BASIC18.45■□□□□ 0.54
NLRP3Q96P20 HDHD3-201ENST00000238379 1834 ntAPPRIS P1 TSL 1 (best) BASIC18.45■□□□□ 0.54
NLRP3Q96P20 AC092198.1-201ENST00000447651 2691 ntTSL 2 BASIC18.45■□□□□ 0.54
NLRP3Q96P20 MYH14-204ENST00000440075 4247 ntTSL 1 (best) BASIC18.45■□□□□ 0.54
NLRP3Q96P20 CRB3-201ENST00000308243 631 ntAPPRIS ALT2 TSL 2 BASIC18.45■□□□□ 0.54
NLRP3Q96P20 UQCRQ-203ENST00000378670 839 ntAPPRIS P1 TSL 1 (best) BASIC18.45■□□□□ 0.54
NLRP3Q96P20 THAP4-202ENST00000402136 785 ntTSL 1 (best) BASIC18.45■□□□□ 0.54
NLRP3Q96P20 PEX13-203ENST00000414712 1014 ntTSL 1 (best) BASIC18.45■□□□□ 0.54
NLRP3Q96P20 LINC01006-202ENST00000418309 640 ntTSL 3 BASIC18.45■□□□□ 0.54
NLRP3Q96P20 BX284668.5-201ENST00000422124 406 ntTSL 2 BASIC18.45■□□□□ 0.54
NLRP3Q96P20 PFN2-206ENST00000461930 606 ntTSL 4 BASIC18.45■□□□□ 0.54
NLRP3Q96P20 IFITM1-204ENST00000528780 730 ntAPPRIS P1 TSL 3 BASIC18.45■□□□□ 0.54
NLRP3Q96P20 LINC01475-201ENST00000548010 766 ntTSL 1 (best) BASIC18.45■□□□□ 0.54
NLRP3Q96P20 VPS18-202ENST00000558474 873 ntTSL 3 BASIC18.45■□□□□ 0.54
NLRP3Q96P20 AC005779.2-201ENST00000593083 550 ntAPPRIS P1 TSL 4 BASIC18.45■□□□□ 0.54
NLRP3Q96P20 ACP7-202ENST00000594229 1149 ntTSL 5 BASIC18.45■□□□□ 0.54
NLRP3Q96P20 CYP4B1-215ENST00000640628 969 ntTSL 5 BASIC18.45■□□□□ 0.54
NLRP3Q96P20 NEDD4-202ENST00000435532 5869 ntAPPRIS P1 TSL 1 (best) BASIC18.45■□□□□ 0.54
NLRP3Q96P20 SUCLA2-201ENST00000378654 2192 ntAPPRIS P1 TSL 1 (best) BASIC18.45■□□□□ 0.54
NLRP3Q96P20 ACAD9-201ENST00000308982 2454 ntAPPRIS P1 TSL 1 (best) BASIC18.45■□□□□ 0.54
NLRP3Q96P20 ARHGEF10-201ENST00000349830 5590 ntAPPRIS P3 TSL 1 (best) BASIC18.45■□□□□ 0.54
Retrieved 100 of 98,524 protein–RNA pairs in 31.7 ms