Protein–RNA interactions for Protein: Q96FT9

IFT43, Intraflagellar transport protein 43 homolog, humanhuman

Predictions only

Length 208 aa.

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Protein RNA Prediction (catRAPID) Interaction (ENCODE eCLIP)
Gene UniProt Accession Transcript Symbol Ensembl Transcript ID Length Transcript Status Prediction Score Prediction z-Score p-Value Fold Change
IFT43Q96FT9 MRPL58-201ENST00000301585 890 ntAPPRIS P1 TSL 1 (best) BASIC15.65■□□□□ 0.1
IFT43Q96FT9 NAA10-201ENST00000370009 837 ntTSL 1 (best) BASIC15.65■□□□□ 0.1
IFT43Q96FT9 NAA10-203ENST00000370015 1002 ntTSL 5 BASIC15.65■□□□□ 0.1
IFT43Q96FT9 MXI1-205ENST00000393134 889 ntTSL 2 BASIC15.65■□□□□ 0.1
IFT43Q96FT9 COPS6-202ENST00000418625 1107 ntAPPRIS ALT2 TSL 5 BASIC15.65■□□□□ 0.1
IFT43Q96FT9 THPO-202ENST00000421442 1132 ntTSL 1 (best) BASIC15.65■□□□□ 0.1
IFT43Q96FT9 AL442647.2-201ENST00000429864 857 ntBASIC15.65■□□□□ 0.1
IFT43Q96FT9 KCNQ1DN-201ENST00000441418 1093 ntTSL 1 (best) BASIC15.65■□□□□ 0.1
IFT43Q96FT9 DNAJC19-208ENST00000486355 828 ntTSL 2 BASIC15.65■□□□□ 0.1
IFT43Q96FT9 DNAJC19-209ENST00000491873 769 ntTSL 2 BASIC15.65■□□□□ 0.1
IFT43Q96FT9 MRPL36-204ENST00000508987 686 ntAPPRIS P1 TSL 2 BASIC15.65■□□□□ 0.1
IFT43Q96FT9 IL32-215ENST00000529550 772 ntAPPRIS P4 TSL 3 BASIC15.65■□□□□ 0.1
IFT43Q96FT9 HILS1-202ENST00000545329 423 ntBASIC15.65■□□□□ 0.1
IFT43Q96FT9 AC009088.3-201ENST00000563605 357 ntTSL 3 BASIC15.65■□□□□ 0.1
IFT43Q96FT9 KXD1-204ENST00000595073 1095 ntAPPRIS P1 TSL 5 BASIC15.65■□□□□ 0.1
IFT43Q96FT9 PHF14-215ENST00000634607 3407 ntAPPRIS P1 TSL 5 BASIC15.65■□□□□ 0.1
IFT43Q96FT9 STRA6-207ENST00000535552 2631 ntTSL 2 BASIC15.65■□□□□ 0.1
IFT43Q96FT9 PRPF38B-202ENST00000370022 1591 ntTSL 1 (best) BASIC15.65■□□□□ 0.1
IFT43Q96FT9 PRPH-201ENST00000257860 3245 ntAPPRIS P1 TSL 1 (best) BASIC15.65■□□□□ 0.1
IFT43Q96FT9 MBD1-205ENST00000353909 2820 ntTSL 1 (best) BASIC15.65■□□□□ 0.1
IFT43Q96FT9 CPSF7-202ENST00000394888 3650 ntAPPRIS P4 TSL 2 BASIC15.65■□□□□ 0.1
IFT43Q96FT9 AP002990.1-202ENST00000496634 5064 ntAPPRIS P1 TSL 2 BASIC15.65■□□□□ 0.1
IFT43Q96FT9 KRT9-202ENST00000588431 1493 ntTSL 1 (best) BASIC15.65■□□□□ 0.1
IFT43Q96FT9 PHF24-201ENST00000242315 5718 ntAPPRIS P1 TSL 1 (best) BASIC15.65■□□□□ 0.1
IFT43Q96FT9 MGMT-201ENST00000306010 1759 ntAPPRIS P1 TSL 1 (best) BASIC15.64■□□□□ 0.1
IFT43Q96FT9 RNF222-202ENST00000399398 3062 ntAPPRIS P1 TSL 5 BASIC15.64■□□□□ 0.09
IFT43Q96FT9 TJP3-207ENST00000589378 3068 ntAPPRIS ALT2 TSL 2 BASIC15.64■□□□□ 0.09
IFT43Q96FT9 CYB561-219ENST00000584031 3200 ntTSL 2 BASIC15.64■□□□□ 0.09
IFT43Q96FT9 ADAMTS14-202ENST00000373208 5269 ntAPPRIS P4 TSL 2 BASIC15.64■□□□□ 0.09
IFT43Q96FT9 EFCAB2-202ENST00000366522 6167 ntTSL 2 BASIC15.64■□□□□ 0.09
IFT43Q96FT9 C1orf228-219ENST00000535358 1685 ntAPPRIS P2 TSL 5 BASIC15.64■□□□□ 0.09
IFT43Q96FT9 DNAJC14-201ENST00000317269 3330 ntAPPRIS P1 TSL 1 (best) BASIC15.64■□□□□ 0.09
IFT43Q96FT9 XPO6-201ENST00000304658 4422 ntAPPRIS P1 TSL 1 (best) BASIC15.64■□□□□ 0.09
IFT43Q96FT9 CHST5-201ENST00000336257 3245 ntAPPRIS P1 TSL 1 (best) BASIC15.64■□□□□ 0.09
IFT43Q96FT9 FKBP1C-201ENST00000370659 1579 ntAPPRIS P1 BASIC15.64■□□□□ 0.09
IFT43Q96FT9 VAMP1-202ENST00000396308 1113 ntAPPRIS P1 TSL 2 BASIC15.64■□□□□ 0.09
IFT43Q96FT9 LINC01067-201ENST00000432575 664 ntTSL 3 BASIC15.64■□□□□ 0.09
IFT43Q96FT9 SFTPC-202ENST00000437090 773 ntTSL 3 BASIC15.64■□□□□ 0.09
IFT43Q96FT9 AC007274.1-201ENST00000439805 662 ntBASIC15.64■□□□□ 0.09
IFT43Q96FT9 SMARCA2-214ENST00000450198 5602 ntTSL 1 (best) BASIC15.64■□□□□ 0.09
IFT43Q96FT9 AC120057.1-201ENST00000483947 663 ntBASIC15.64■□□□□ 0.09
IFT43Q96FT9 GRIA3-205ENST00000611689 936 ntTSL 1 (best) BASIC15.64■□□□□ 0.09
IFT43Q96FT9 OR4C6-202ENST00000641251 1058 ntAPPRIS P1 BASIC15.64■□□□□ 0.09
IFT43Q96FT9 GAS2L2-203ENST00000618498 2655 ntTSL 1 (best) BASIC15.64■□□□□ 0.09
IFT43Q96FT9 APBA1-201ENST00000265381 6534 ntAPPRIS P1 TSL 1 (best) BASIC15.64■□□□□ 0.09
IFT43Q96FT9 CYB5D2-201ENST00000301391 1910 ntAPPRIS P1 TSL 1 (best) BASIC15.64■□□□□ 0.09
IFT43Q96FT9 TRIM62-204ENST00000543586 1638 ntTSL 2 BASIC15.64■□□□□ 0.09
IFT43Q96FT9 CD300LG-206ENST00000588884 1459 ntAPPRIS ALT2 TSL 2 BASIC15.64■□□□□ 0.09
IFT43Q96FT9 UBTF-204ENST00000436088 2738 ntAPPRIS P1 TSL 2 BASIC15.64■□□□□ 0.09
IFT43Q96FT9 BHMG1-201ENST00000457052 2749 ntAPPRIS P1 TSL 5 BASIC15.64■□□□□ 0.09
IFT43Q96FT9 TSC22D1-211ENST00000501704 4026 ntTSL 2 BASIC15.64■□□□□ 0.09
IFT43Q96FT9 PRR23C-201ENST00000413199 2791 ntAPPRIS P1 BASIC15.64■□□□□ 0.09
IFT43Q96FT9 CAPN1-224ENST00000533129 2792 ntAPPRIS P1 TSL 5 BASIC15.64■□□□□ 0.09
IFT43Q96FT9 HNF1B-201ENST00000613727 1546 ntTSL 1 (best) BASIC15.63■□□□□ 0.09
IFT43Q96FT9 KCNG4-202ENST00000568181 2199 ntTSL 1 (best) BASIC15.63■□□□□ 0.09
IFT43Q96FT9 TK2-221ENST00000620035 5060 ntTSL 2 BASIC15.63■□□□□ 0.09
IFT43Q96FT9 MUTYH-206ENST00000372115 1888 ntTSL 1 (best) BASIC15.63■□□□□ 0.09
IFT43Q96FT9 MTA3-203ENST00000406652 5484 ntTSL 1 (best) BASIC15.63■□□□□ 0.09
IFT43Q96FT9 LONP1-202ENST00000540670 3002 ntTSL 2 BASIC15.63■□□□□ 0.09
IFT43Q96FT9 GPRASP1-205ENST00000537097 5980 ntAPPRIS P1 TSL 2 BASIC15.63■□□□□ 0.09
IFT43Q96FT9 ENDOD1-201ENST00000278505 4687 ntAPPRIS P1 TSL 1 (best) BASIC15.63■□□□□ 0.09
IFT43Q96FT9 ZNF777-201ENST00000247930 3233 ntAPPRIS P1 TSL 1 (best) BASIC15.63■□□□□ 0.09
IFT43Q96FT9 TUBBP5-201ENST00000290377 1563 ntTSL 1 (best) BASIC15.63■□□□□ 0.09
IFT43Q96FT9 AC232323.1-201ENST00000540724 2099 ntBASIC15.63■□□□□ 0.09
IFT43Q96FT9 REXO1L5P-201ENST00000622260 2098 ntBASIC15.63■□□□□ 0.09
IFT43Q96FT9 NACC1-201ENST00000292431 4445 ntAPPRIS P1 TSL 1 (best) BASIC15.63■□□□□ 0.09
IFT43Q96FT9 CEP76-201ENST00000262127 2939 ntAPPRIS P1 TSL 1 (best) BASIC15.63■□□□□ 0.09
IFT43Q96FT9 NKIRAS2-201ENST00000307641 2948 ntAPPRIS P1 TSL 1 (best) BASIC15.63■□□□□ 0.09
IFT43Q96FT9 ATG4B-206ENST00000405546 3294 ntTSL 2 BASIC15.63■□□□□ 0.09
IFT43Q96FT9 TBP-207ENST00000616883 1750 ntAPPRIS ALT2 TSL 5 BASIC15.63■□□□□ 0.09
IFT43Q96FT9 MEG9-201ENST00000429368 2638 ntTSL 2 BASIC15.63■□□□□ 0.09
IFT43Q96FT9 KCNK7-201ENST00000340313 1298 ntAPPRIS P1 TSL 1 (best) BASIC15.63■□□□□ 0.09
IFT43Q96FT9 IGHV3-7-201ENST00000390598 430 ntAPPRIS P1 BASIC15.63■□□□□ 0.09
IFT43Q96FT9 KRTAP10-1-201ENST00000400375 1215 ntAPPRIS P1 BASIC15.63■□□□□ 0.09
IFT43Q96FT9 AC105940.2-201ENST00000421055 380 ntTSL 3 BASIC15.63■□□□□ 0.09
IFT43Q96FT9 AC112492.5-201ENST00000421897 457 ntBASIC15.63■□□□□ 0.09
IFT43Q96FT9 TREX1-201ENST00000433541 1105 ntTSL 1 (best) BASIC15.63■□□□□ 0.09
IFT43Q96FT9 CGB8-201ENST00000448456 882 ntAPPRIS P1 TSL 1 (best) BASIC15.63■□□□□ 0.09
IFT43Q96FT9 TMEM191A-209ENST00000452055 788 ntTSL 2 BASIC15.63■□□□□ 0.09
IFT43Q96FT9 RPL13AP25-201ENST00000484130 612 ntBASIC15.63■□□□□ 0.09
IFT43Q96FT9 ACAP1-208ENST00000574499 412 ntTSL 2 BASIC15.63■□□□□ 0.09
IFT43Q96FT9 SMIM22-202ENST00000586440 549 ntAPPRIS P4 TSL 1 (best) BASIC15.63■□□□□ 0.09
IFT43Q96FT9 AL049840.4-201ENST00000602422 811 ntBASIC15.63■□□□□ 0.09
IFT43Q96FT9 IL32-235ENST00000613483 1033 ntAPPRIS ALT2 TSL 5 BASIC15.63■□□□□ 0.09
IFT43Q96FT9 AC243829.4-204ENST00000616926 1115 ntTSL 5 BASIC15.63■□□□□ 0.09
IFT43Q96FT9 AL160035.1-201ENST00000637583 576 ntTSL 4 BASIC15.63■□□□□ 0.09
IFT43Q96FT9 REEP3-201ENST00000373758 5205 ntAPPRIS P1 TSL 1 (best) BASIC15.63■□□□□ 0.09
IFT43Q96FT9 COCH-203ENST00000460581 2688 ntTSL 2 BASIC15.63■□□□□ 0.09
IFT43Q96FT9 SYNPO2L-202ENST00000394810 4921 ntAPPRIS P1 TSL 1 (best) BASIC15.63■□□□□ 0.09
IFT43Q96FT9 ZNF821-203ENST00000446827 1822 ntTSL 1 (best) BASIC15.63■□□□□ 0.09
IFT43Q96FT9 BICDL1-201ENST00000397558 3055 ntAPPRIS P1 TSL 5 BASIC15.63■□□□□ 0.09
IFT43Q96FT9 HNRNPUL1-205ENST00000593587 2725 ntTSL 2 BASIC15.63■□□□□ 0.09
IFT43Q96FT9 KSR1-216ENST00000582410 2392 ntTSL 2 BASIC15.63■□□□□ 0.09
IFT43Q96FT9 TNFSF13-202ENST00000349228 2036 ntTSL 1 (best) BASIC15.63■□□□□ 0.09
IFT43Q96FT9 AL390755.1-201ENST00000623716 2027 ntBASIC15.63■□□□□ 0.09
IFT43Q96FT9 TMEM181-201ENST00000367090 5390 ntAPPRIS P1 TSL 1 (best) BASIC15.63■□□□□ 0.09
IFT43Q96FT9 HID1-202ENST00000425042 3271 ntAPPRIS P1 TSL 1 (best) BASIC15.63■□□□□ 0.09
IFT43Q96FT9 GOLGA8H-201ENST00000566740 1899 ntAPPRIS P1 TSL 5 BASIC15.63■□□□□ 0.09
IFT43Q96FT9 GOLGA8J-201ENST00000567927 1899 ntAPPRIS P1 TSL 5 BASIC15.63■□□□□ 0.09
IFT43Q96FT9 ETV7-201ENST00000339796 1530 ntAPPRIS ALT2 TSL 1 (best) BASIC15.63■□□□□ 0.09
Retrieved 100 of 98,524 protein–RNA pairs in 43.2 ms