Protein–RNA interactions for Protein: Q96A23

CPNE4, Copine-4, humanhuman

Predicted RBP Predictions only

Length 557 aa.

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Protein RNA Prediction (catRAPID) Interaction (ENCODE eCLIP)
Gene UniProt Accession Transcript Symbol Ensembl Transcript ID Length Transcript Status Prediction Score Prediction z-Score p-Value Fold Change
CPNE4Q96A23 DHPS-201ENST00000210060 1363 ntAPPRIS P1 TSL 1 (best) BASIC13.61□□□□□ -0.23
CPNE4Q96A23 TBXAS1-201ENST00000336425 2185 ntAPPRIS P1 TSL 1 (best) BASIC13.61□□□□□ -0.23
CPNE4Q96A23 SEMA3B-212ENST00000616701 2958 ntAPPRIS P3 TSL 1 (best) BASIC13.61□□□□□ -0.23
CPNE4Q96A23 TYSND1-202ENST00000335494 3397 ntTSL 1 (best) BASIC13.61□□□□□ -0.23
CPNE4Q96A23 TLL1-201ENST00000061240 6708 ntAPPRIS P1 TSL 1 (best) BASIC13.61□□□□□ -0.23
CPNE4Q96A23 NRBP1-201ENST00000233557 2887 ntAPPRIS P1 TSL 2 BASIC13.61□□□□□ -0.23
CPNE4Q96A23 LINC01010-201ENST00000431422 2069 ntTSL 2 BASIC13.61□□□□□ -0.23
CPNE4Q96A23 UGT3A1-204ENST00000507113 1650 ntTSL 2 BASIC13.61□□□□□ -0.23
CPNE4Q96A23 SCLT1-209ENST00000511426 1696 ntAPPRIS ALT2 TSL 1 (best) BASIC13.61□□□□□ -0.23
CPNE4Q96A23 MUTYH-234ENST00000528013 1662 ntTSL 5 BASIC13.61□□□□□ -0.23
CPNE4Q96A23 NAGK-201ENST00000244204 1154 ntAPPRIS P5 TSL 1 (best) BASIC13.61□□□□□ -0.23
CPNE4Q96A23 OR8S1-201ENST00000310194 1080 ntBASIC13.61□□□□□ -0.23
CPNE4Q96A23 AC112492.5-201ENST00000421897 457 ntBASIC13.61□□□□□ -0.23
CPNE4Q96A23 MNX1-AS2-201ENST00000429228 374 ntTSL 3 BASIC13.61□□□□□ -0.23
CPNE4Q96A23 AP000345.1-201ENST00000454863 569 ntTSL 4 BASIC13.61□□□□□ -0.23
CPNE4Q96A23 DMKN-216ENST00000458071 510 ntAPPRIS ALT2 TSL 3 BASIC13.61□□□□□ -0.23
CPNE4Q96A23 SEPT7P9-202ENST00000489259 743 ntTSL 3 BASIC13.61□□□□□ -0.23
CPNE4Q96A23 AC090735.1-201ENST00000523881 488 ntTSL 4 BASIC13.61□□□□□ -0.23
CPNE4Q96A23 AP001995.1-201ENST00000531784 1157 ntTSL 4 BASIC13.61□□□□□ -0.23
CPNE4Q96A23 TSPAN11-204ENST00000546076 1058 ntAPPRIS P1 TSL 2 BASIC13.61□□□□□ -0.23
CPNE4Q96A23 AL118558.1-202ENST00000557242 451 ntTSL 3 BASIC13.61□□□□□ -0.23
CPNE4Q96A23 AP000439.4-201ENST00000567742 664 ntTSL 3 BASIC13.61□□□□□ -0.23
CPNE4Q96A23 EGLN2-209ENST00000594140 991 ntTSL 2 BASIC13.61□□□□□ -0.23
CPNE4Q96A23 UBE2E3-205ENST00000602475 602 ntTSL 3 BASIC13.61□□□□□ -0.23
CPNE4Q96A23 AC010735.2-201ENST00000607970 584 ntTSL 4 BASIC13.61□□□□□ -0.23
CPNE4Q96A23 EPB41L3-206ENST00000544123 3972 ntAPPRIS ALT2 TSL 2 BASIC13.61□□□□□ -0.23
CPNE4Q96A23 TMEM25-206ENST00000442938 2228 ntTSL 2 BASIC13.61□□□□□ -0.23
CPNE4Q96A23 FOXRED1-213ENST00000532125 1825 ntAPPRIS ALT2 TSL 2 BASIC13.61□□□□□ -0.23
CPNE4Q96A23 B4GALNT3-201ENST00000266383 5068 ntAPPRIS P1 TSL 1 (best) BASIC13.61□□□□□ -0.23
CPNE4Q96A23 NWD2-201ENST00000309447 8325 ntAPPRIS P1 TSL 5 BASIC13.61□□□□□ -0.23
CPNE4Q96A23 FOS-202ENST00000535987 1402 ntTSL 2 BASIC13.61□□□□□ -0.23
CPNE4Q96A23 PNPLA5-201ENST00000216177 2539 ntAPPRIS P1 TSL 1 (best) BASIC13.61□□□□□ -0.23
CPNE4Q96A23 DSEL-201ENST00000310045 9531 ntAPPRIS P1 TSL 2 BASIC13.61□□□□□ -0.23
CPNE4Q96A23 AP000845.1-201ENST00000581677 2131 ntBASIC13.61□□□□□ -0.23
CPNE4Q96A23 GRB2-202ENST00000316804 3248 ntAPPRIS P1 TSL 1 (best) BASIC13.61□□□□□ -0.23
CPNE4Q96A23 SLC44A2-203ENST00000586078 3784 ntTSL 5 BASIC13.61□□□□□ -0.23
CPNE4Q96A23 PRPF3-201ENST00000324862 2433 ntAPPRIS P1 TSL 1 (best) BASIC13.61□□□□□ -0.23
CPNE4Q96A23 ANKMY2-201ENST00000306999 2555 ntAPPRIS P1 TSL 1 (best) BASIC13.61□□□□□ -0.23
CPNE4Q96A23 AGPAT1-202ENST00000375104 2017 ntAPPRIS P1 TSL 2 BASIC13.61□□□□□ -0.23
CPNE4Q96A23 PNPLA5-202ENST00000381198 2000 ntTSL 2 BASIC13.61□□□□□ -0.23
CPNE4Q96A23 PKIG-204ENST00000372889 1489 ntAPPRIS P1 TSL 5 BASIC13.61□□□□□ -0.23
CPNE4Q96A23 KIAA1468-201ENST00000256858 5579 ntAPPRIS P1 TSL 5 BASIC13.61□□□□□ -0.23
CPNE4Q96A23 AC010327.3-201ENST00000591665 1643 ntTSL 2 BASIC13.61□□□□□ -0.23
CPNE4Q96A23 KRT32-201ENST00000225899 1750 ntAPPRIS P1 TSL 1 (best) BASIC13.6□□□□□ -0.23
CPNE4Q96A23 SUMO3-203ENST00000397898 1779 ntTSL 3 BASIC13.6□□□□□ -0.23
CPNE4Q96A23 ADCYAP1R1-204ENST00000409489 1761 ntTSL 5 BASIC13.6□□□□□ -0.23
CPNE4Q96A23 PATZ1-203ENST00000351933 3638 ntTSL 1 (best) BASIC13.6□□□□□ -0.23
CPNE4Q96A23 REXO1L5P-201ENST00000622260 2098 ntBASIC13.6□□□□□ -0.23
CPNE4Q96A23 RPS19-206ENST00000598742 2359 ntAPPRIS P1 TSL 1 (best) BASIC13.6□□□□□ -0.23
CPNE4Q96A23 TBC1D1-219ENST00000615497 2383 ntTSL 2 BASIC13.6□□□□□ -0.23
CPNE4Q96A23 CHRDL1-205ENST00000482160 1537 ntTSL 2 BASIC13.6□□□□□ -0.23
CPNE4Q96A23 PRRT2-207ENST00000572820 2403 ntAPPRIS P1 TSL 5 BASIC13.6□□□□□ -0.23
CPNE4Q96A23 FARP1-214ENST00000595437 4926 ntTSL 1 (best) BASIC13.6□□□□□ -0.23
CPNE4Q96A23 TAS1R1-201ENST00000333172 2892 ntAPPRIS P1 TSL 1 (best) BASIC13.6□□□□□ -0.23
CPNE4Q96A23 SRSF2-203ENST00000392485 2885 ntAPPRIS P1 TSL 1 (best) BASIC13.6□□□□□ -0.23
CPNE4Q96A23 LINC00900-201ENST00000499809 3322 ntTSL 2 BASIC13.6□□□□□ -0.23
CPNE4Q96A23 SEC16A-202ENST00000290037 8982 ntAPPRIS ALT2 TSL 1 (best) BASIC13.6□□□□□ -0.23
CPNE4Q96A23 CMA1-202ENST00000250378 937 ntAPPRIS P1 TSL 1 (best) BASIC13.6□□□□□ -0.23
CPNE4Q96A23 SOD1-201ENST00000270142 966 ntAPPRIS P1 TSL 1 (best) BASIC13.6□□□□□ -0.23
CPNE4Q96A23 SULT2B1-202ENST00000323090 1447 ntAPPRIS ALT2 TSL 1 (best) BASIC13.6□□□□□ -0.23
CPNE4Q96A23 OR10H1-201ENST00000334920 1124 ntAPPRIS P1 BASIC13.6□□□□□ -0.23
CPNE4Q96A23 CDR2L-201ENST00000337231 3536 ntAPPRIS P1 TSL 1 (best) BASIC13.6□□□□□ -0.23
CPNE4Q96A23 CASQ1-201ENST00000368078 1897 ntAPPRIS P1 TSL 1 (best) BASIC13.6□□□□□ -0.23
CPNE4Q96A23 GK-202ENST00000378941 458 ntTSL 3 BASIC13.6□□□□□ -0.23
CPNE4Q96A23 TSPAN32-204ENST00000381121 999 ntAPPRIS ALT2 TSL 5 BASIC13.6□□□□□ -0.23
CPNE4Q96A23 NGDN-202ENST00000408901 1143 ntAPPRIS ALT2 TSL 1 (best) BASIC13.6□□□□□ -0.23
CPNE4Q96A23 KIF9-205ENST00000432493 633 ntTSL 1 (best) BASIC13.6□□□□□ -0.23
CPNE4Q96A23 AL035588.1-201ENST00000438967 408 ntTSL 3 BASIC13.6□□□□□ -0.23
CPNE4Q96A23 AC007551.1-201ENST00000457394 519 ntBASIC13.6□□□□□ -0.23
CPNE4Q96A23 ACA64.2-201ENST00000459014 129 ntBASIC13.6□□□□□ -0.23
CPNE4Q96A23 LIMS3-203ENST00000480744 1197 ntAPPRIS P1 TSL 5 BASIC13.6□□□□□ -0.23
CPNE4Q96A23 FTH1P14-201ENST00000482930 551 ntBASIC13.6□□□□□ -0.23
CPNE4Q96A23 CLRN2-201ENST00000511148 823 ntAPPRIS P1 TSL 1 (best) BASIC13.6□□□□□ -0.23
CPNE4Q96A23 AC100818.1-201ENST00000524167 563 ntTSL 4 BASIC13.6□□□□□ -0.23
CPNE4Q96A23 ZFPL1-207ENST00000526791 384 ntTSL 3 BASIC13.6□□□□□ -0.23
CPNE4Q96A23 RPL28-206ENST00000558752 671 ntTSL 3 BASIC13.6□□□□□ -0.23
CPNE4Q96A23 AC025279.2-201ENST00000569730 653 ntBASIC13.6□□□□□ -0.23
CPNE4Q96A23 RN7SL48P-201ENST00000579283 293 ntBASIC13.6□□□□□ -0.23
CPNE4Q96A23 AC017083.2-201ENST00000608069 979 ntBASIC13.6□□□□□ -0.23
CPNE4Q96A23 LINC02351-201ENST00000614728 289 ntTSL 2 BASIC13.6□□□□□ -0.23
CPNE4Q96A23 LARP4-220ENST00000615080 856 ntTSL 5 BASIC13.6□□□□□ -0.23
CPNE4Q96A23 PSMC3-213ENST00000619920 1580 ntAPPRIS P2 TSL 1 (best) BASIC13.6□□□□□ -0.23
CPNE4Q96A23 AC132938.4-201ENST00000623835 848 ntBASIC13.6□□□□□ -0.23
CPNE4Q96A23 AC006486.2-201ENST00000624246 2199 ntBASIC13.6□□□□□ -0.23
CPNE4Q96A23 CTSD-211ENST00000637387 1597 ntAPPRIS ALT2 TSL 5 BASIC13.6□□□□□ -0.23
CPNE4Q96A23 RIPK1-201ENST00000259808 4160 ntAPPRIS P1 TSL 5 BASIC13.6□□□□□ -0.23
CPNE4Q96A23 KCNQ2-204ENST00000359125 3253 ntAPPRIS P4 TSL 1 (best) BASIC13.6□□□□□ -0.23
CPNE4Q96A23 MYEF2-201ENST00000267836 2958 ntAPPRIS ALT2 TSL 1 (best) BASIC13.6□□□□□ -0.23
CPNE4Q96A23 TBC1D3P5-202ENST00000581469 2513 ntTSL 1 (best) BASIC13.6□□□□□ -0.23
CPNE4Q96A23 ZNF398-205ENST00000491174 2232 ntTSL 2 BASIC13.6□□□□□ -0.23
CPNE4Q96A23 AC013268.4-201ENST00000637413 2228 ntBASIC13.6□□□□□ -0.23
CPNE4Q96A23 AC023157.3-201ENST00000619086 2088 ntBASIC13.6□□□□□ -0.23
CPNE4Q96A23 UPB1-202ENST00000382760 1928 ntTSL 5 BASIC13.6□□□□□ -0.23
CPNE4Q96A23 TC2N-206ENST00000556018 1770 ntTSL 2 BASIC13.6□□□□□ -0.23
CPNE4Q96A23 GNAO1-201ENST00000262493 3337 ntAPPRIS P5 TSL 1 (best) BASIC13.6□□□□□ -0.23
CPNE4Q96A23 TBC1D2-201ENST00000342112 3046 ntTSL 2 BASIC13.6□□□□□ -0.23
CPNE4Q96A23 PLD3-204ENST00000409281 2115 ntAPPRIS P1 TSL 2 BASIC13.6□□□□□ -0.23
CPNE4Q96A23 AL157414.3-201ENST00000624276 1954 ntBASIC13.6□□□□□ -0.23
CPNE4Q96A23 NOTCH4-201ENST00000375023 6745 ntAPPRIS P1 TSL 1 (best) BASIC13.6□□□□□ -0.23
CPNE4Q96A23 DUSP11-201ENST00000272444 1653 ntAPPRIS P1 TSL 1 (best) BASIC13.59□□□□□ -0.23
Retrieved 100 of 98,524 protein–RNA pairs in 56.5 ms