Protein–RNA interactions for Protein: P49458

SRP9, Signal recognition particle 9 kDa protein, humanhuman

Known RBP Predictions only

Length 86 aa.

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Protein RNA Prediction (catRAPID) Interaction (ENCODE eCLIP)
Gene UniProt Accession Transcript Symbol Ensembl Transcript ID Length Transcript Status Prediction Score Prediction z-Score p-Value Fold Change
SRP9P49458 ANK1-201ENST00000265709 6379 ntAPPRIS ALT2 TSL 1 (best) BASIC13.5□□□□□ -0.25
SRP9P49458 SRC-202ENST00000373558 4304 ntTSL 5 BASIC13.5□□□□□ -0.25
SRP9P49458 DUSP26-203ENST00000523956 1373 ntAPPRIS P1 TSL 5 BASIC13.5□□□□□ -0.25
SRP9P49458 TRIM71-201ENST00000383763 8685 ntAPPRIS P1 TSL 1 (best) BASIC13.5□□□□□ -0.25
SRP9P49458 AC067750.1-201ENST00000608826 6545 ntBASIC13.5□□□□□ -0.25
SRP9P49458 SH3KBP1-205ENST00000397821 4731 ntAPPRIS P1 TSL 1 (best) BASIC13.5□□□□□ -0.25
SRP9P49458 SCUBE1-202ENST00000360835 9808 ntAPPRIS P1 TSL 1 (best) BASIC13.5□□□□□ -0.25
SRP9P49458 OSTC-201ENST00000361564 1077 ntAPPRIS P1 TSL 1 (best) BASIC13.5□□□□□ -0.25
SRP9P49458 C1orf43-203ENST00000368516 872 ntTSL 2 BASIC13.5□□□□□ -0.25
SRP9P49458 DBNDD2-205ENST00000372717 1207 ntTSL 5 BASIC13.5□□□□□ -0.25
SRP9P49458 PSMB9-207ENST00000374859 782 ntAPPRIS P1 TSL 1 (best) BASIC13.5□□□□□ -0.25
SRP9P49458 PSMB9-208ENST00000395330 792 ntTSL 3 BASIC13.5□□□□□ -0.25
SRP9P49458 UBE2F-202ENST00000409332 1138 ntTSL 5 BASIC13.5□□□□□ -0.25
SRP9P49458 AZGP1P1-201ENST00000411909 902 ntBASIC13.5□□□□□ -0.25
SRP9P49458 AC008278.1-201ENST00000431117 568 ntTSL 4 BASIC13.5□□□□□ -0.25
SRP9P49458 SHF-202ENST00000458022 1163 ntAPPRIS ALT2 TSL 2 BASIC13.5□□□□□ -0.25
SRP9P49458 AC002310.2-201ENST00000486926 950 ntTSL 2 BASIC13.5□□□□□ -0.25
SRP9P49458 INGX-202ENST00000489074 768 ntBASIC13.5□□□□□ -0.25
SRP9P49458 AC106872.10-201ENST00000503778 747 ntTSL 3 BASIC13.5□□□□□ -0.25
SRP9P49458 SDHAP3-202ENST00000515467 728 ntBASIC13.5□□□□□ -0.25
SRP9P49458 LINC01605-204ENST00000522718 1093 ntTSL 3 BASIC13.5□□□□□ -0.25
SRP9P49458 RHBDL2-203ENST00000540558 697 ntTSL 1 (best) BASIC13.5□□□□□ -0.25
SRP9P49458 AC133919.2-202ENST00000563515 416 ntTSL 3 BASIC13.5□□□□□ -0.25
SRP9P49458 AC138304.1-201ENST00000563841 424 ntTSL 3 BASIC13.5□□□□□ -0.25
SRP9P49458 SSH2-210ENST00000582084 560 ntTSL 3 BASIC13.5□□□□□ -0.25
SRP9P49458 AC005498.2-205ENST00000593218 784 ntBASIC13.5□□□□□ -0.25
SRP9P49458 AC011467.4-201ENST00000594891 528 ntBASIC13.5□□□□□ -0.25
SRP9P49458 AL359183.1-201ENST00000623796 2132 ntBASIC13.5□□□□□ -0.25
SRP9P49458 CLN3-246ENST00000636228 1224 ntTSL 1 (best) BASIC13.5□□□□□ -0.25
SRP9P49458 MARVELD3-201ENST00000268485 2912 ntAPPRIS P3 TSL 1 (best) BASIC13.5□□□□□ -0.25
SRP9P49458 EP400NL-206ENST00000446190 3697 ntTSL 2 BASIC13.5□□□□□ -0.25
SRP9P49458 XRCC1-202ENST00000543982 1994 ntTSL 2 BASIC13.5□□□□□ -0.25
SRP9P49458 DBN1-203ENST00000393565 2701 ntAPPRIS ALT2 TSL 5 BASIC13.5□□□□□ -0.25
SRP9P49458 TGIF2-201ENST00000373872 3406 ntAPPRIS P1 TSL 1 (best) BASIC13.5□□□□□ -0.25
SRP9P49458 FANCG-201ENST00000378643 2631 ntAPPRIS P2 TSL 1 (best) BASIC13.5□□□□□ -0.25
SRP9P49458 ANKRD35-201ENST00000355594 3342 ntAPPRIS P1 TSL 2 BASIC13.5□□□□□ -0.25
SRP9P49458 CLK4-201ENST00000316308 2568 ntAPPRIS P1 TSL 1 (best) BASIC13.5□□□□□ -0.25
SRP9P49458 MAGED4B-202ENST00000360134 2510 ntAPPRIS ALT2 TSL 1 (best) BASIC13.5□□□□□ -0.25
SRP9P49458 ARPC4-TTLL3-201ENST00000397256 2466 ntAPPRIS P1 TSL 5 BASIC13.5□□□□□ -0.25
SRP9P49458 LINC02395-201ENST00000546821 3157 ntTSL 1 (best) BASIC13.5□□□□□ -0.25
SRP9P49458 CCDC105-201ENST00000292574 1732 ntAPPRIS P1 TSL 1 (best) BASIC13.5□□□□□ -0.25
SRP9P49458 APBA1-201ENST00000265381 6534 ntAPPRIS P1 TSL 1 (best) BASIC13.5□□□□□ -0.25
SRP9P49458 SEMA4B-201ENST00000332496 3781 ntAPPRIS P1 TSL 1 (best) BASIC13.5□□□□□ -0.25
SRP9P49458 TRAK1-203ENST00000396175 5033 ntAPPRIS ALT2 TSL 5 BASIC13.5□□□□□ -0.25
SRP9P49458 SPOCK3-202ENST00000357545 2936 ntAPPRIS P3 TSL 1 (best) BASIC13.5□□□□□ -0.25
SRP9P49458 PCDHA5-201ENST00000529619 4157 ntTSL 1 (best) BASIC13.5□□□□□ -0.25
SRP9P49458 GFY-202ENST00000610896 1557 ntAPPRIS P1 TSL 2 BASIC13.49□□□□□ -0.25
SRP9P49458 CYB5R3-205ENST00000407623 2153 ntTSL 3 BASIC13.49□□□□□ -0.25
SRP9P49458 TSC2-203ENST00000382538 5264 ntAPPRIS ALT2 TSL 2 BASIC13.49□□□□□ -0.25
SRP9P49458 PHKG1-210ENST00000537360 2139 ntAPPRIS ALT1 TSL 1 (best) BASIC13.49□□□□□ -0.25
SRP9P49458 COL25A1-203ENST00000399132 2724 ntAPPRIS P4 TSL 5 BASIC13.49□□□□□ -0.25
SRP9P49458 ZP3-201ENST00000336517 1483 ntAPPRIS P3 TSL 1 (best) BASIC13.49□□□□□ -0.25
SRP9P49458 PFDN4-201ENST00000371419 1462 ntAPPRIS P1 TSL 1 (best) BASIC13.49□□□□□ -0.25
SRP9P49458 PRRT3-202ENST00000411976 1475 ntAPPRIS ALT2 TSL 1 (best) BASIC13.49□□□□□ -0.25
SRP9P49458 TRPV4-202ENST00000418703 3247 ntAPPRIS P1 TSL 1 (best) BASIC13.49□□□□□ -0.25
SRP9P49458 TMEM132E-203ENST00000631683 4379 ntAPPRIS P2 TSL 5 BASIC13.49□□□□□ -0.25
SRP9P49458 PCDHB14-201ENST00000239449 4828 ntAPPRIS P1 BASIC13.49□□□□□ -0.25
SRP9P49458 MAEL-202ENST00000367872 1908 ntAPPRIS P1 TSL 1 (best) BASIC13.49□□□□□ -0.25
SRP9P49458 HPCAL1-202ENST00000381765 1904 ntAPPRIS P1 TSL 2 BASIC13.49□□□□□ -0.25
SRP9P49458 DGCR9-201ENST00000609630 2415 ntBASIC13.49□□□□□ -0.25
SRP9P49458 POLL-205ENST00000370169 2360 ntAPPRIS P1 TSL 1 (best) BASIC13.49□□□□□ -0.25
SRP9P49458 NTRK2-201ENST00000277120 8633 ntAPPRIS P3 TSL 1 (best) BASIC13.49□□□□□ -0.25
SRP9P49458 AL121757.1-201ENST00000430097 1836 ntTSL 1 (best) BASIC13.49□□□□□ -0.25
SRP9P49458 AC092135.3-201ENST00000624151 1846 ntBASIC13.49□□□□□ -0.25
SRP9P49458 FBRS-201ENST00000287468 2811 ntAPPRIS P1 TSL 5 BASIC13.49□□□□□ -0.25
SRP9P49458 COLEC11-205ENST00000402922 1134 ntTSL 1 (best) BASIC13.49□□□□□ -0.25
SRP9P49458 PIGZ-204ENST00000443835 675 ntTSL 4 BASIC13.49□□□□□ -0.25
SRP9P49458 LINC01160-202ENST00000450155 894 ntTSL 3 BASIC13.49□□□□□ -0.25
SRP9P49458 AL359815.1-201ENST00000457706 821 ntTSL 2 BASIC13.49□□□□□ -0.25
SRP9P49458 RPL10P19-202ENST00000520582 722 ntTSL 3 BASIC13.49□□□□□ -0.25
SRP9P49458 AQP6-203ENST00000551733 849 ntTSL 3 BASIC13.49□□□□□ -0.25
SRP9P49458 KLK15-204ENST00000598239 855 ntAPPRIS P3 TSL 1 (best) BASIC13.49□□□□□ -0.25
SRP9P49458 MRNIP-225ENST00000610475 810 ntTSL 5 BASIC13.49□□□□□ -0.25
SRP9P49458 HIST1H2AG-201ENST00000359193 2250 ntAPPRIS P1 BASIC13.49□□□□□ -0.25
SRP9P49458 SPRY2-201ENST00000377102 2708 ntAPPRIS P1 TSL 1 (best) BASIC13.49□□□□□ -0.25
SRP9P49458 AL031280.1-201ENST00000436991 2224 ntTSL 2 BASIC13.49□□□□□ -0.25
SRP9P49458 RMDN3-201ENST00000260385 3138 ntAPPRIS P1 TSL 1 (best) BASIC13.49□□□□□ -0.25
SRP9P49458 IDH3G-203ENST00000370093 1662 ntTSL 2 BASIC13.49□□□□□ -0.25
SRP9P49458 WASHC2A-202ENST00000314664 4519 ntAPPRIS ALT2 TSL 1 (best) BASIC13.49□□□□□ -0.25
SRP9P49458 EGFR-206ENST00000454757 5464 ntTSL 1 (best) BASIC13.49□□□□□ -0.25
SRP9P49458 CDYL-205ENST00000449732 2139 ntTSL 2 BASIC13.49□□□□□ -0.25
SRP9P49458 CYP1A1-207ENST00000567032 2107 ntAPPRIS P1 TSL 1 (best) BASIC13.49□□□□□ -0.25
SRP9P49458 SEC14L4-204ENST00000381982 1603 ntTSL 1 (best) BASIC13.49□□□□□ -0.25
SRP9P49458 REXO1L2P-201ENST00000425429 2069 ntBASIC13.49□□□□□ -0.25
SRP9P49458 EIF4G1-201ENST00000342981 5667 ntAPPRIS ALT1 TSL 1 (best) BASIC13.49□□□□□ -0.25
SRP9P49458 NUP98-201ENST00000324932 6973 ntAPPRIS P1 TSL 1 (best) BASIC13.49□□□□□ -0.25
SRP9P49458 CLCNKA-201ENST00000331433 2475 ntAPPRIS P3 TSL 1 (best) BASIC13.49□□□□□ -0.25
SRP9P49458 CYP4F11-202ENST00000326742 2877 ntTSL 1 (best) BASIC13.49□□□□□ -0.25
SRP9P49458 AC126335.2-201ENST00000623362 4637 ntBASIC13.49□□□□□ -0.25
SRP9P49458 PTGES3-202ENST00000414274 1547 ntTSL 2 BASIC13.49□□□□□ -0.25
SRP9P49458 LINC01978-202ENST00000574526 1540 ntTSL 1 (best) BASIC13.49□□□□□ -0.25
SRP9P49458 DNAJA1-201ENST00000330899 2381 ntAPPRIS P1 TSL 1 (best) BASIC13.49□□□□□ -0.25
SRP9P49458 KIF6-203ENST00000394362 2394 ntTSL 5 BASIC13.49□□□□□ -0.25
SRP9P49458 AC113367.3-201ENST00000508316 1912 ntBASIC13.49□□□□□ -0.25
SRP9P49458 SRGAP2C-201ENST00000304465 1477 ntTSL 5 BASIC13.48□□□□□ -0.25
SRP9P49458 SRGAP2-201ENST00000419187 1477 ntTSL 5 BASIC13.48□□□□□ -0.25
SRP9P49458 CLN3-229ENST00000567963 1452 ntTSL 5 BASIC13.48□□□□□ -0.25
SRP9P49458 SRGAP2B-205ENST00000619678 1477 ntTSL 5 BASIC13.48□□□□□ -0.25
SRP9P49458 NMNAT3-202ENST00000339837 1863 ntTSL 1 (best) BASIC13.48□□□□□ -0.25
SRP9P49458 OR2V1-202ENST00000641318 2665 ntAPPRIS P1 BASIC13.48□□□□□ -0.25
Retrieved 100 of 98,524 protein–RNA pairs in 67.4 ms