Protein–RNA interactions for Protein: P49454

CENPF, Centromere protein F, humanhuman

Predictions only

Length 3,210 aa.

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Protein RNA Prediction (catRAPID) Interaction (ENCODE eCLIP)
Gene UniProt Accession Transcript Symbol Ensembl Transcript ID Length Transcript Status Prediction Score Prediction z-Score p-Value Fold Change
CENPFP49454 ABHD17AP9-201ENST00000561925 548 ntBASIC16.58■□□□□ 0.24
CENPFP49454 AC019294.2-203ENST00000569596 594 ntTSL 3 BASIC16.58■□□□□ 0.24
CENPFP49454 AC009950.1-210ENST00000594622 553 ntTSL 3 BASIC16.58■□□□□ 0.24
CENPFP49454 AC007326.1-201ENST00000604539 458 ntBASIC16.58■□□□□ 0.24
CENPFP49454 TBL2-201ENST00000305632 3161 ntAPPRIS P1 TSL 1 (best) BASIC16.58■□□□□ 0.24
CENPFP49454 CD74-202ENST00000353334 1449 ntTSL 1 (best) BASIC16.58■□□□□ 0.24
CENPFP49454 LONRF3-201ENST00000304778 2989 ntTSL 1 (best) BASIC16.58■□□□□ 0.24
CENPFP49454 RPH3AL-202ENST00000331302 2606 ntAPPRIS P2 TSL 2 BASIC16.58■□□□□ 0.24
CENPFP49454 AL360270.3-201ENST00000609118 1348 ntBASIC16.58■□□□□ 0.24
CENPFP49454 ARNTL-205ENST00000403510 2745 ntTSL 2 BASIC16.57■□□□□ 0.24
CENPFP49454 GEM-202ENST00000396194 2103 ntAPPRIS P1 TSL 1 (best) BASIC16.57■□□□□ 0.24
CENPFP49454 ITGBL1-207ENST00000622834 2369 ntTSL 5 BASIC16.57■□□□□ 0.24
CENPFP49454 PAK1-201ENST00000278568 2543 ntTSL 2 BASIC16.57■□□□□ 0.24
CENPFP49454 ZC3H14-204ENST00000336693 2007 ntTSL 1 (best) BASIC16.57■□□□□ 0.24
CENPFP49454 ARFGAP1-210ENST00000519273 3176 ntTSL 2 BASIC16.57■□□□□ 0.24
CENPFP49454 EWSR1-206ENST00000397938 2654 ntAPPRIS ALT2 TSL 1 (best) BASIC16.57■□□□□ 0.24
CENPFP49454 AL451105.2-201ENST00000413763 1234 ntTSL 5 BASIC16.57■□□□□ 0.24
CENPFP49454 ALG3P1-201ENST00000508806 1114 ntBASIC16.57■□□□□ 0.24
CENPFP49454 IGHEP1-201ENST00000521393 651 ntBASIC16.57■□□□□ 0.24
CENPFP49454 MIR5001-201ENST00000580185 100 ntBASIC16.57■□□□□ 0.24
CENPFP49454 AC008972.2-201ENST00000606587 494 ntBASIC16.57■□□□□ 0.24
CENPFP49454 ARRB2-218ENST00000575877 1579 ntTSL 5 BASIC16.57■□□□□ 0.24
CENPFP49454 GRSF1-208ENST00000545193 2682 ntTSL 2 BASIC16.57■□□□□ 0.24
CENPFP49454 CISH-201ENST00000348721 2043 ntAPPRIS P1 TSL 1 (best) BASIC16.57■□□□□ 0.24
CENPFP49454 ST3GAL3-209ENST00000361400 2195 ntTSL 1 (best) BASIC16.57■□□□□ 0.24
CENPFP49454 HIBCH-201ENST00000359678 1939 ntAPPRIS P1 TSL 1 (best) BASIC16.57■□□□□ 0.24
CENPFP49454 VCAN-204ENST00000502527 2087 ntAPPRIS ALT1 TSL 1 (best) BASIC16.57■□□□□ 0.24
CENPFP49454 SFSWAP-210ENST00000541286 3219 ntAPPRIS ALT2 TSL 1 (best) BASIC16.57■□□□□ 0.24
CENPFP49454 RABL2A-206ENST00000409842 1979 ntTSL 1 (best) BASIC16.57■□□□□ 0.24
CENPFP49454 HHLA3-202ENST00000361764 692 ntAPPRIS P3 TSL 2 BASIC16.57■□□□□ 0.24
CENPFP49454 HLA-DRB5-201ENST00000374975 1260 ntAPPRIS P1 BASIC16.57■□□□□ 0.24
CENPFP49454 SLC13A3-205ENST00000417157 876 ntTSL 1 (best) BASIC16.57■□□□□ 0.24
CENPFP49454 AC004895.1-203ENST00000428901 540 ntTSL 4 BASIC16.57■□□□□ 0.24
CENPFP49454 CALCA-205ENST00000486207 851 ntAPPRIS P1 TSL 5 BASIC16.57■□□□□ 0.24
CENPFP49454 SRP14-204ENST00000558720 780 ntTSL 2 BASIC16.57■□□□□ 0.24
CENPFP49454 AC092299.1-201ENST00000632679 757 ntBASIC16.57■□□□□ 0.24
CENPFP49454 PAK4-205ENST00000593690 3025 ntAPPRIS P1 TSL 1 (best) BASIC16.57■□□□□ 0.24
CENPFP49454 SIN3B-206ENST00000595541 2767 ntTSL 2 BASIC16.57■□□□□ 0.24
CENPFP49454 INPP5J-207ENST00000405300 2515 ntTSL 1 (best) BASIC16.57■□□□□ 0.24
CENPFP49454 FEZF1-AS1-202ENST00000428449 2653 ntTSL 2 BASIC16.57■□□□□ 0.24
CENPFP49454 CTSV-201ENST00000259470 1546 ntAPPRIS P1 TSL 1 (best) BASIC16.57■□□□□ 0.24
CENPFP49454 FAM180B-201ENST00000538490 1388 ntAPPRIS P1 TSL 1 (best) BASIC16.57■□□□□ 0.24
CENPFP49454 SLC35B2-206ENST00000615337 2014 ntTSL 4 BASIC16.57■□□□□ 0.24
CENPFP49454 EVX2-201ENST00000308618 4203 ntAPPRIS P1 TSL 5 BASIC16.57■□□□□ 0.24
CENPFP49454 EWSR1-204ENST00000333395 1265 ntTSL 1 (best) BASIC16.57■□□□□ 0.24
CENPFP49454 SMAD9-IT1-201ENST00000437983 504 ntTSL 3 BASIC16.57■□□□□ 0.24
CENPFP49454 AL355803.1-201ENST00000455524 188 ntTSL 2 BASIC16.57■□□□□ 0.24
CENPFP49454 AP004550.1-201ENST00000532652 514 ntTSL 3 BASIC16.57■□□□□ 0.24
CENPFP49454 AC010754.1-201ENST00000582300 1061 ntTSL 3 BASIC16.57■□□□□ 0.24
CENPFP49454 AP000866.1-201ENST00000499143 2886 ntTSL 1 (best) BASIC16.57■□□□□ 0.24
CENPFP49454 EFR3B-203ENST00000402191 3685 ntTSL 5 BASIC16.57■□□□□ 0.24
CENPFP49454 SEL1L3-202ENST00000399878 4520 ntAPPRIS P1 TSL 1 (best) BASIC16.56■□□□□ 0.24
CENPFP49454 NDRG1-202ENST00000414097 3755 ntAPPRIS P1 TSL 2 BASIC16.56■□□□□ 0.24
CENPFP49454 IER2-203ENST00000588173 2934 ntAPPRIS P1 BASIC16.56■□□□□ 0.24
CENPFP49454 SYN1-201ENST00000295987 3299 ntAPPRIS P3 TSL 2 BASIC16.56■□□□□ 0.24
CENPFP49454 HSD17B6-207ENST00000555805 1722 ntAPPRIS P1 TSL 5 BASIC16.56■□□□□ 0.24
CENPFP49454 ZNF384-202ENST00000355772 2514 ntTSL 1 (best) BASIC16.56■□□□□ 0.24
CENPFP49454 EIF4E2-201ENST00000258416 1604 ntAPPRIS P1 TSL 1 (best) BASIC16.56■□□□□ 0.24
CENPFP49454 AC055854.1-203ENST00000521141 1630 ntTSL 5 BASIC16.56■□□□□ 0.24
CENPFP49454 APOA1-203ENST00000375320 940 ntAPPRIS P1 TSL 3 BASIC16.56■□□□□ 0.24
CENPFP49454 RN7SKP109-201ENST00000410592 316 ntBASIC16.56■□□□□ 0.24
CENPFP49454 OR2R1P-201ENST00000441404 914 ntBASIC16.56■□□□□ 0.24
CENPFP49454 ROPN1B-203ENST00000505382 713 ntTSL 2 BASIC16.56■□□□□ 0.24
CENPFP49454 AP005264.6-204ENST00000588436 719 ntBASIC16.56■□□□□ 0.24
CENPFP49454 AL078590.3-205ENST00000606039 465 ntTSL 5 BASIC16.56■□□□□ 0.24
CENPFP49454 PAX4-207ENST00000611453 1235 ntTSL 5 BASIC16.56■□□□□ 0.24
CENPFP49454 DNAJC10-211ENST00000640034 888 ntTSL 5 BASIC16.56■□□□□ 0.24
CENPFP49454 DGKZ-205ENST00000456247 3482 ntAPPRIS ALT2 TSL 1 (best) BASIC16.56■□□□□ 0.24
CENPFP49454 ERCC1-208ENST00000589165 1453 ntAPPRIS P1 TSL 5 BASIC16.56■□□□□ 0.24
CENPFP49454 DMTN-223ENST00000523782 2235 ntAPPRIS P1 TSL 5 BASIC16.56■□□□□ 0.24
CENPFP49454 RARA-206ENST00000425707 3041 ntTSL 1 (best) BASIC16.56■□□□□ 0.24
CENPFP49454 STRN-202ENST00000379213 2254 ntTSL 5 BASIC16.56■□□□□ 0.24
CENPFP49454 ANKMY1-202ENST00000361678 2499 ntTSL 1 (best) BASIC16.56■□□□□ 0.24
CENPFP49454 PGAP2-227ENST00000496834 1530 ntTSL 2 BASIC16.56■□□□□ 0.24
CENPFP49454 PLIN3-202ENST00000585479 1535 ntAPPRIS ALT1 TSL 1 (best) BASIC16.56■□□□□ 0.24
CENPFP49454 CD19-201ENST00000324662 1932 ntAPPRIS P3 TSL 1 (best) BASIC16.56■□□□□ 0.24
CENPFP49454 TRMT10B-207ENST00000537911 2108 ntTSL 2 BASIC16.56■□□□□ 0.24
CENPFP49454 SAP130-202ENST00000259235 4065 ntTSL 1 (best) BASIC16.56■□□□□ 0.24
CENPFP49454 SUOX-204ENST00000394115 2394 ntAPPRIS P1 TSL 2 BASIC16.56■□□□□ 0.24
CENPFP49454 PIGT-202ENST00000279036 2245 ntAPPRIS P1 TSL 1 (best) BASIC16.56■□□□□ 0.24
CENPFP49454 TMEM258-207ENST00000543510 1692 ntTSL 2 BASIC16.56■□□□□ 0.24
CENPFP49454 TXNL4B-203ENST00000426362 965 ntAPPRIS P1 TSL 2 BASIC16.56■□□□□ 0.24
CENPFP49454 AC254562.2-201ENST00000428786 667 ntTSL 3 BASIC16.56■□□□□ 0.24
CENPFP49454 USB1-205ENST00000561743 1135 ntTSL 3 BASIC16.56■□□□□ 0.24
CENPFP49454 DHRS7C-202ENST00000571134 984 ntAPPRIS ALT1 TSL 1 (best) BASIC16.56■□□□□ 0.24
CENPFP49454 AC025048.2-201ENST00000590744 786 ntTSL 2 BASIC16.56■□□□□ 0.24
CENPFP49454 ATRAID-207ENST00000606999 956 ntAPPRIS P1 TSL 1 (best) BASIC16.56■□□□□ 0.24
CENPFP49454 JRK-211ENST00000615982 2823 ntAPPRIS ALT2 TSL 1 (best) BASIC16.56■□□□□ 0.24
CENPFP49454 TMEM40-204ENST00000435218 1547 ntAPPRIS ALT2 TSL 1 (best) BASIC16.56■□□□□ 0.24
CENPFP49454 ABR-203ENST00000536794 2213 ntTSL 2 BASIC16.56■□□□□ 0.24
CENPFP49454 ZNF777-201ENST00000247930 3233 ntAPPRIS P1 TSL 1 (best) BASIC16.56■□□□□ 0.24
CENPFP49454 TRPC4AP-201ENST00000252015 3226 ntAPPRIS P1 TSL 1 (best) BASIC16.56■□□□□ 0.24
CENPFP49454 AC136621.1-201ENST00000624017 2304 ntBASIC16.56■□□□□ 0.24
CENPFP49454 RPN1-207ENST00000497289 2137 ntTSL 2 BASIC16.55■□□□□ 0.24
CENPFP49454 RASA4B-207ENST00000541662 2794 ntAPPRIS P2 TSL 2 BASIC16.55■□□□□ 0.24
CENPFP49454 SURF4-203ENST00000371991 715 ntTSL 3 BASIC16.55■□□□□ 0.24
CENPFP49454 HSPB7-203ENST00000406363 648 ntAPPRIS ALT1 TSL 1 (best) BASIC16.55■□□□□ 0.24
CENPFP49454 DPY19L2P5-201ENST00000456300 331 ntBASIC16.55■□□□□ 0.24
CENPFP49454 RNA5SP417-201ENST00000516459 108 ntBASIC16.55■□□□□ 0.24
CENPFP49454 AC009779.3-204ENST00000549424 367 ntTSL 3 BASIC16.55■□□□□ 0.24
Retrieved 100 of 98,524 protein–RNA pairs in 43.8 ms