Protein–RNA interactions for Protein: P43307

SSR1, Translocon-associated protein subunit alpha, humanhuman

Known RBP Predictions only

Length 286 aa.

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Protein RNA Prediction (catRAPID) Interaction (ENCODE eCLIP)
Gene UniProt Accession Transcript Symbol Ensembl Transcript ID Length Transcript Status Prediction Score Prediction z-Score p-Value Fold Change
SSR1P43307 MGMT-201ENST00000306010 1759 ntAPPRIS P1 TSL 1 (best) BASIC16.19■□□□□ 0.18
SSR1P43307 ACIN1-201ENST00000262710 4935 ntAPPRIS P3 TSL 1 (best) BASIC16.19■□□□□ 0.18
SSR1P43307 ATG2A-203ENST00000421419 1481 ntTSL 1 (best) BASIC16.19■□□□□ 0.18
SSR1P43307 KCNJ5-203ENST00000533599 1350 ntAPPRIS P1 TSL 1 (best) BASIC16.19■□□□□ 0.18
SSR1P43307 RERG-209ENST00000546331 1383 ntTSL 2 BASIC16.19■□□□□ 0.18
SSR1P43307 DYNLL1-201ENST00000242577 720 ntAPPRIS P1 TSL 1 (best) BASIC16.19■□□□□ 0.18
SSR1P43307 PSMB8-203ENST00000395339 1025 ntTSL 3 BASIC16.19■□□□□ 0.18
SSR1P43307 VAMP1-202ENST00000396308 1113 ntAPPRIS P1 TSL 2 BASIC16.19■□□□□ 0.18
SSR1P43307 TOMM22P5-201ENST00000416399 439 ntBASIC16.19■□□□□ 0.18
SSR1P43307 RNASE10-202ENST00000430083 1172 ntTSL 2 BASIC16.19■□□□□ 0.18
SSR1P43307 AC008278.1-201ENST00000431117 568 ntTSL 4 BASIC16.19■□□□□ 0.18
SSR1P43307 TEX48-201ENST00000436752 708 ntAPPRIS P1 TSL 5 BASIC16.19■□□□□ 0.18
SSR1P43307 LINC01160-201ENST00000441004 768 ntTSL 3 BASIC16.19■□□□□ 0.18
SSR1P43307 PIGZ-204ENST00000443835 675 ntTSL 4 BASIC16.19■□□□□ 0.18
SSR1P43307 AL356441.1-201ENST00000452618 492 ntTSL 3 BASIC16.19■□□□□ 0.18
SSR1P43307 AC092910.3-202ENST00000469070 982 ntTSL 3 BASIC16.19■□□□□ 0.18
SSR1P43307 AC020659.2-201ENST00000510176 585 ntTSL 4 BASIC16.19■□□□□ 0.18
SSR1P43307 RPL28-205ENST00000558131 444 ntTSL 5 BASIC16.19■□□□□ 0.18
SSR1P43307 PSMD7-204ENST00000567958 692 ntTSL 3 BASIC16.19■□□□□ 0.18
SSR1P43307 TEX48-202ENST00000612244 662 ntTSL 3 BASIC16.19■□□□□ 0.18
SSR1P43307 EBAG9-209ENST00000614147 1179 ntTSL 5 BASIC16.19■□□□□ 0.18
SSR1P43307 SFT2D2-204ENST00000630869 1073 ntTSL 4 BASIC16.19■□□□□ 0.18
SSR1P43307 RBFADN-204ENST00000568911 5187 ntTSL 2 BASIC16.19■□□□□ 0.18
SSR1P43307 LINC01782-201ENST00000591212 2908 ntTSL 1 (best) BASIC16.19■□□□□ 0.18
SSR1P43307 NALCN-AS1-201ENST00000457843 2846 ntTSL 2 BASIC16.19■□□□□ 0.18
SSR1P43307 BHMG1-201ENST00000457052 2749 ntAPPRIS P1 TSL 5 BASIC16.19■□□□□ 0.18
SSR1P43307 FECH-202ENST00000382873 2526 ntAPPRIS ALT2 TSL 2 BASIC16.19■□□□□ 0.18
SSR1P43307 IL1RN-203ENST00000361779 1922 ntTSL 1 (best) BASIC16.19■□□□□ 0.18
SSR1P43307 CNTFR-204ENST00000610543 1926 ntAPPRIS P1 TSL 5 BASIC16.19■□□□□ 0.18
SSR1P43307 MBD1-207ENST00000398488 1512 ntTSL 1 (best) BASIC16.19■□□□□ 0.18
SSR1P43307 FKBP6-202ENST00000413573 1507 ntTSL 5 BASIC16.19■□□□□ 0.18
SSR1P43307 ATP6V0E1-203ENST00000519374 1433 ntAPPRIS P1 TSL 1 (best) BASIC16.19■□□□□ 0.18
SSR1P43307 CD2BP2-203ENST00000569466 1417 ntAPPRIS P1 TSL 1 (best) BASIC16.19■□□□□ 0.18
SSR1P43307 REXO1L2P-201ENST00000425429 2069 ntBASIC16.18■□□□□ 0.18
SSR1P43307 COL8A2-201ENST00000303143 4447 ntAPPRIS P1 TSL 2 BASIC16.18■□□□□ 0.18
SSR1P43307 RIC1-203ENST00000414202 6774 ntAPPRIS P1 TSL 5 BASIC16.18■□□□□ 0.18
SSR1P43307 VAT1-201ENST00000355653 2734 ntAPPRIS P1 TSL 1 (best) BASIC16.18■□□□□ 0.18
SSR1P43307 TMPRSS6-202ENST00000381792 3260 ntAPPRIS ALT2 TSL 5 BASIC16.18■□□□□ 0.18
SSR1P43307 ZNF384-202ENST00000355772 2514 ntTSL 1 (best) BASIC16.18■□□□□ 0.18
SSR1P43307 UBAP1-202ENST00000359544 2535 ntAPPRIS P1 TSL 1 (best) BASIC16.18■□□□□ 0.18
SSR1P43307 SATB2-201ENST00000260926 5318 ntAPPRIS P1 TSL 1 (best) BASIC16.18■□□□□ 0.18
SSR1P43307 FMR1-203ENST00000370470 1774 ntTSL 5 BASIC16.18■□□□□ 0.18
SSR1P43307 MBD1-217ENST00000588937 1761 ntAPPRIS ALT2 TSL 1 (best) BASIC16.18■□□□□ 0.18
SSR1P43307 NEDD4L-205ENST00000400345 3647 ntAPPRIS P4 TSL 1 (best) BASIC16.18■□□□□ 0.18
SSR1P43307 USP28-214ENST00000545540 3431 ntTSL 2 BASIC16.18■□□□□ 0.18
SSR1P43307 LHCGR-202ENST00000401907 1477 ntTSL 5 BASIC16.18■□□□□ 0.18
SSR1P43307 CMTR2-201ENST00000338099 4869 ntAPPRIS P1 TSL 1 (best) BASIC16.18■□□□□ 0.18
SSR1P43307 RAB43-202ENST00000393304 4230 ntAPPRIS P1 TSL 4 BASIC16.18■□□□□ 0.18
SSR1P43307 IRF9-203ENST00000557894 1391 ntTSL 5 BASIC16.18■□□□□ 0.18
SSR1P43307 ADCYAP1R1-207ENST00000614107 6575 ntAPPRIS ALT2 TSL 5 BASIC16.18■□□□□ 0.18
SSR1P43307 AC073349.1-201ENST00000340779 1062 ntTSL 1 (best) BASIC16.18■□□□□ 0.18
SSR1P43307 FCRLB-204ENST00000367946 1152 ntTSL 1 (best) BASIC16.18■□□□□ 0.18
SSR1P43307 PKIG-203ENST00000372887 769 ntTSL 3 BASIC16.18■□□□□ 0.18
SSR1P43307 MIPEPP3-202ENST00000424756 347 ntTSL 3 BASIC16.18■□□□□ 0.18
SSR1P43307 GHSR-202ENST00000427970 912 ntBASIC16.18■□□□□ 0.18
SSR1P43307 RPS27L-204ENST00000455271 923 ntTSL 1 (best) BASIC16.18■□□□□ 0.18
SSR1P43307 AL512638.1-201ENST00000457493 794 ntBASIC16.18■□□□□ 0.18
SSR1P43307 AC092910.3-201ENST00000484076 969 ntTSL 1 (best) BASIC16.18■□□□□ 0.18
SSR1P43307 C8orf88-201ENST00000517562 894 ntAPPRIS P1 TSL 2 BASIC16.18■□□□□ 0.18
SSR1P43307 MSC-AS1-206ENST00000519751 596 ntTSL 4 BASIC16.18■□□□□ 0.18
SSR1P43307 STOM-203ENST00000538954 1257 ntTSL 5 BASIC16.18■□□□□ 0.18
SSR1P43307 SHBG-212ENST00000575314 1146 ntTSL 1 (best) BASIC16.18■□□□□ 0.18
SSR1P43307 AC093512.1-201ENST00000617969 520 ntBASIC16.18■□□□□ 0.18
SSR1P43307 AGT-201ENST00000366667 2291 ntAPPRIS P1 TSL 1 (best) BASIC16.18■□□□□ 0.18
SSR1P43307 UBL7-209ENST00000567435 1720 ntAPPRIS P1 TSL 1 (best) BASIC16.18■□□□□ 0.18
SSR1P43307 RGMA-204ENST00000543599 3174 ntAPPRIS ALT2 TSL 5 BASIC16.18■□□□□ 0.18
SSR1P43307 CPSF7-205ENST00000439958 3524 ntAPPRIS ALT1 TSL 1 (best) BASIC16.18■□□□□ 0.18
SSR1P43307 AC004706.4-201ENST00000634965 3537 ntAPPRIS P1 BASIC16.18■□□□□ 0.18
SSR1P43307 ROPN1B-202ENST00000504401 2050 ntTSL 1 (best) BASIC16.18■□□□□ 0.18
SSR1P43307 SLC39A9-209ENST00000556605 2065 ntTSL 1 (best) BASIC16.18■□□□□ 0.18
SSR1P43307 ACE3P-201ENST00000423435 1973 ntBASIC16.18■□□□□ 0.18
SSR1P43307 DUOXA1-210ENST00000559014 1965 ntTSL 2 BASIC16.18■□□□□ 0.18
SSR1P43307 TBX10-201ENST00000335385 1548 ntAPPRIS P1 TSL 1 (best) BASIC16.18■□□□□ 0.18
SSR1P43307 PRR12-203ENST00000615927 4479 ntAPPRIS ALT2 TSL 5 BASIC16.18■□□□□ 0.18
SSR1P43307 GRN-201ENST00000053867 2342 ntAPPRIS P1 TSL 1 (best) BASIC16.18■□□□□ 0.18
SSR1P43307 HTR7-202ENST00000336152 3126 ntTSL 1 (best) BASIC16.18■□□□□ 0.18
SSR1P43307 AC139749.1-202ENST00000617529 3139 ntBASIC16.18■□□□□ 0.18
SSR1P43307 EFR3B-202ENST00000401432 5162 ntTSL 2 BASIC16.18■□□□□ 0.18
SSR1P43307 ALCAM-201ENST00000306107 4701 ntAPPRIS P1 TSL 1 (best) BASIC16.18■□□□□ 0.18
SSR1P43307 ADAM15-209ENST00000449910 2946 ntAPPRIS ALT2 TSL 1 (best) BASIC16.18■□□□□ 0.18
SSR1P43307 ARRDC4-201ENST00000268042 4072 ntAPPRIS P1 TSL 1 (best) BASIC16.18■□□□□ 0.18
SSR1P43307 GNB1L-201ENST00000329517 6706 ntAPPRIS P1 TSL 1 (best) BASIC16.18■□□□□ 0.18
SSR1P43307 TIGD4-201ENST00000304337 2472 ntAPPRIS P1 TSL 1 (best) BASIC16.18■□□□□ 0.18
SSR1P43307 URAHP-202ENST00000409873 1349 ntTSL 1 (best) BASIC16.18■□□□□ 0.18
SSR1P43307 COLQ-206ENST00000603808 1668 ntAPPRIS ALT1 TSL 1 (best) BASIC16.18■□□□□ 0.18
SSR1P43307 TELO2-201ENST00000262319 3314 ntAPPRIS P1 TSL 1 (best) BASIC16.17■□□□□ 0.18
SSR1P43307 NFIC-201ENST00000341919 1573 ntTSL 1 (best) BASIC16.17■□□□□ 0.18
SSR1P43307 COL20A1-203ENST00000422202 8097 ntAPPRIS ALT2 TSL 5 BASIC16.17■□□□□ 0.18
SSR1P43307 IRF8-201ENST00000268638 3030 ntAPPRIS P1 TSL 1 (best) BASIC16.17■□□□□ 0.18
SSR1P43307 PRPF8-205ENST00000572621 7445 ntAPPRIS P1 TSL 5 BASIC16.17■□□□□ 0.18
SSR1P43307 STC1-202ENST00000524323 1748 ntTSL 1 (best) BASIC16.17■□□□□ 0.18
SSR1P43307 DDX56-201ENST00000258772 2336 ntAPPRIS P1 TSL 1 (best) BASIC16.17■□□□□ 0.18
SSR1P43307 EPB41L1-202ENST00000338074 6266 ntAPPRIS P3 TSL 1 (best) BASIC16.17■□□□□ 0.18
SSR1P43307 MCM7-202ENST00000343023 1968 ntTSL 1 (best) BASIC16.17■□□□□ 0.18
SSR1P43307 PCDHGB8P-201ENST00000502926 1973 ntBASIC16.17■□□□□ 0.18
SSR1P43307 MAP3K12-205ENST00000547488 2807 ntAPPRIS ALT2 TSL 2 BASIC16.17■□□□□ 0.18
SSR1P43307 MTCL1-202ENST00000359865 6093 ntAPPRIS P2 TSL 2 BASIC16.17■□□□□ 0.18
SSR1P43307 NRBF2-201ENST00000277746 1853 ntAPPRIS P1 TSL 1 (best) BASIC16.17■□□□□ 0.18
SSR1P43307 JTB-201ENST00000271843 1287 ntAPPRIS P1 TSL 1 (best) BASIC16.17■□□□□ 0.18
SSR1P43307 TMEM37-202ENST00000409826 794 ntTSL 3 BASIC16.17■□□□□ 0.18
Retrieved 100 of 98,524 protein–RNA pairs in 66.1 ms