Protein–RNA interactions for Protein: P20248

CCNA2, Cyclin-A2, humanhuman

Predictions only

Length 432 aa.

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Protein RNA Prediction (catRAPID) Interaction (ENCODE eCLIP)
Gene UniProt Accession Transcript Symbol Ensembl Transcript ID Length Transcript Status Prediction Score Prediction z-Score p-Value Fold Change
CCNA2P20248 TMEM200A-204ENST00000617887 2899 ntAPPRIS P1 TSL 2 BASIC14.36□□□□□ -0.11
CCNA2P20248 OR2C3-201ENST00000366487 8467 ntAPPRIS P1 BASIC14.36□□□□□ -0.11
CCNA2P20248 ANP32A-203ENST00000465139 2440 ntAPPRIS P2 TSL 1 (best) BASIC14.36□□□□□ -0.11
CCNA2P20248 HTR3A-205ENST00000504030 2432 ntAPPRIS P1 TSL 1 (best) BASIC14.36□□□□□ -0.11
CCNA2P20248 FAM107A-206ENST00000474531 2271 ntTSL 2 BASIC14.36□□□□□ -0.11
CCNA2P20248 APBB3-201ENST00000354402 1810 ntTSL 5 BASIC14.36□□□□□ -0.11
CCNA2P20248 UGT3A1-204ENST00000507113 1650 ntTSL 2 BASIC14.36□□□□□ -0.11
CCNA2P20248 LINC01978-202ENST00000574526 1540 ntTSL 1 (best) BASIC14.36□□□□□ -0.11
CCNA2P20248 BCL2L2-PABPN1-203ENST00000557008 1366 ntAPPRIS P1 TSL 5 BASIC14.36□□□□□ -0.11
CCNA2P20248 NUDT16-202ENST00000521288 6108 ntAPPRIS P1 TSL 1 (best) BASIC14.36□□□□□ -0.11
CCNA2P20248 RGMA-202ENST00000425933 3078 ntAPPRIS ALT2 TSL 5 BASIC14.36□□□□□ -0.11
CCNA2P20248 RUFY1-202ENST00000393438 2454 ntAPPRIS ALT2 TSL 1 (best) BASIC14.36□□□□□ -0.11
CCNA2P20248 ACAN-209ENST00000617301 8669 ntAPPRIS ALT2 TSL 5 BASIC14.36□□□□□ -0.11
CCNA2P20248 TRMT1-201ENST00000221504 2179 ntAPPRIS ALT2 TSL 1 (best) BASIC14.36□□□□□ -0.11
CCNA2P20248 LINC00163-201ENST00000434081 2155 ntTSL 1 (best) BASIC14.36□□□□□ -0.11
CCNA2P20248 NTN4-201ENST00000343702 3615 ntAPPRIS P1 TSL 1 (best) BASIC14.36□□□□□ -0.11
CCNA2P20248 TBC1D17-201ENST00000221543 2366 ntAPPRIS P1 TSL 1 (best) BASIC14.36□□□□□ -0.11
CCNA2P20248 LMAN2L-201ENST00000264963 2397 ntAPPRIS P3 TSL 1 (best) BASIC14.36□□□□□ -0.11
CCNA2P20248 FGR-202ENST00000374004 2350 ntAPPRIS P1 TSL 1 (best) BASIC14.36□□□□□ -0.11
CCNA2P20248 DNAJC16-201ENST00000375838 2357 ntTSL 5 BASIC14.36□□□□□ -0.11
CCNA2P20248 TBC1D17-209ENST00000622860 2370 ntTSL 5 BASIC14.36□□□□□ -0.11
CCNA2P20248 SGK2-204ENST00000373100 2225 ntAPPRIS P1 TSL 5 BASIC14.36□□□□□ -0.11
CCNA2P20248 AC089987.1-201ENST00000551654 2209 ntBASIC14.36□□□□□ -0.11
CCNA2P20248 PDCD2L-201ENST00000246535 1171 ntAPPRIS P1 TSL 1 (best) BASIC14.36□□□□□ -0.11
CCNA2P20248 ALKBH6-201ENST00000252984 955 ntAPPRIS ALT2 TSL 1 (best) BASIC14.36□□□□□ -0.11
CCNA2P20248 EIF4E-201ENST00000280892 1097 ntTSL 1 (best) BASIC14.36□□□□□ -0.11
CCNA2P20248 MRPL55-201ENST00000295008 632 ntAPPRIS P1 TSL 2 BASIC14.36□□□□□ -0.11
CCNA2P20248 WRB-204ENST00000398753 699 ntTSL 3 BASIC14.36□□□□□ -0.11
CCNA2P20248 MIR943-201ENST00000401286 94 ntBASIC14.36□□□□□ -0.11
CCNA2P20248 RAC2-202ENST00000401529 569 ntTSL 4 BASIC14.36□□□□□ -0.11
CCNA2P20248 TAS2R41-201ENST00000408916 924 ntAPPRIS P1 BASIC14.36□□□□□ -0.11
CCNA2P20248 SPDYE17-201ENST00000412399 783 ntBASIC14.36□□□□□ -0.11
CCNA2P20248 MIPEPP3-202ENST00000424756 347 ntTSL 3 BASIC14.36□□□□□ -0.11
CCNA2P20248 HIST3H2BA-201ENST00000436555 524 ntBASIC14.36□□□□□ -0.11
CCNA2P20248 TMEM120A-203ENST00000439537 1161 ntTSL 1 (best) BASIC14.36□□□□□ -0.11
CCNA2P20248 DNAJB6-209ENST00000443280 1159 ntTSL 2 BASIC14.36□□□□□ -0.11
CCNA2P20248 AC002116.1-201ENST00000473572 1130 ntTSL 2 BASIC14.36□□□□□ -0.11
CCNA2P20248 AL160313.1-201ENST00000502101 1039 ntTSL 1 (best) BASIC14.36□□□□□ -0.11
CCNA2P20248 AC008406.2-201ENST00000507058 532 ntTSL 3 BASIC14.36□□□□□ -0.11
CCNA2P20248 NRK-203ENST00000536164 908 ntTSL 1 (best) BASIC14.36□□□□□ -0.11
CCNA2P20248 NDUFA4L2-202ENST00000554503 1177 ntAPPRIS P1 TSL 1 (best) BASIC14.36□□□□□ -0.11
CCNA2P20248 DUX4L27-201ENST00000554796 1261 ntBASIC14.36□□□□□ -0.11
CCNA2P20248 AC027088.1-201ENST00000557966 1117 ntTSL 2 BASIC14.36□□□□□ -0.11
CCNA2P20248 AC138207.8-201ENST00000579692 739 ntTSL 3 BASIC14.36□□□□□ -0.11
CCNA2P20248 AC010326.2-201ENST00000602124 1020 ntAPPRIS P1 TSL 3 BASIC14.36□□□□□ -0.11
CCNA2P20248 COQ4-205ENST00000609948 956 ntTSL 2 BASIC14.36□□□□□ -0.11
CCNA2P20248 AC073592.8-201ENST00000624126 511 ntBASIC14.36□□□□□ -0.11
CCNA2P20248 TRIM29-221ENST00000627238 510 ntTSL 5 BASIC14.36□□□□□ -0.11
CCNA2P20248 PPIL6-202ENST00000424445 4031 ntTSL 5 BASIC14.36□□□□□ -0.11
CCNA2P20248 CSPG4P12-202ENST00000559989 7790 ntTSL 1 (best) BASIC14.36□□□□□ -0.11
CCNA2P20248 APLP2-203ENST00000338167 3270 ntAPPRIS ALT2 TSL 1 (best) BASIC14.36□□□□□ -0.11
CCNA2P20248 FBXO21-202ENST00000427718 4138 ntTSL 1 (best) BASIC14.36□□□□□ -0.11
CCNA2P20248 AC127383.1-201ENST00000444697 1800 ntBASIC14.36□□□□□ -0.11
CCNA2P20248 GRSF1-201ENST00000254799 6666 ntAPPRIS P1 TSL 5 BASIC14.36□□□□□ -0.11
CCNA2P20248 ANO10-213ENST00000451430 2019 ntTSL 2 BASIC14.36□□□□□ -0.11
CCNA2P20248 NDUFV1-202ENST00000415352 1512 ntAPPRIS ALT1 TSL 2 BASIC14.36□□□□□ -0.11
CCNA2P20248 CHRNA3-201ENST00000326828 3202 ntAPPRIS P1 TSL 1 (best) BASIC14.36□□□□□ -0.11
CCNA2P20248 NBPF26-208ENST00000620612 4602 ntAPPRIS P1 TSL 5 BASIC14.35□□□□□ -0.11
CCNA2P20248 PAX6-202ENST00000379107 2579 ntAPPRIS P4 TSL 5 BASIC14.35□□□□□ -0.11
CCNA2P20248 IRF9-203ENST00000557894 1391 ntTSL 5 BASIC14.35□□□□□ -0.11
CCNA2P20248 FO538757.1-201ENST00000623083 1397 ntBASIC14.35□□□□□ -0.11
CCNA2P20248 WDR45-240ENST00000635003 1376 ntTSL 3 BASIC14.35□□□□□ -0.11
CCNA2P20248 TMEM231-207ENST00000568377 2920 ntTSL 1 (best) BASIC14.35□□□□□ -0.11
CCNA2P20248 DNAJC27-207ENST00000534855 4831 ntTSL 1 (best) BASIC14.35□□□□□ -0.11
CCNA2P20248 ZCCHC17-202ENST00000373714 1730 ntAPPRIS P1 TSL 1 (best) BASIC14.35□□□□□ -0.11
CCNA2P20248 CYP2R1-207ENST00000532378 1746 ntTSL 5 BASIC14.35□□□□□ -0.11
CCNA2P20248 LGALS8-203ENST00000341872 2437 ntAPPRIS ALT2 TSL 1 (best) BASIC14.35□□□□□ -0.11
CCNA2P20248 SNX14-203ENST00000369627 3111 ntTSL 1 (best) BASIC14.35□□□□□ -0.11
CCNA2P20248 UBE3A-204ENST00000438097 8939 ntAPPRIS P3 TSL 5 BASIC14.35□□□□□ -0.11
CCNA2P20248 MROH1-209ENST00000534366 5092 ntAPPRIS ALT2 TSL 1 (best) BASIC14.35□□□□□ -0.11
CCNA2P20248 CDH20-201ENST00000262717 3882 ntAPPRIS P1 TSL 2 BASIC14.35□□□□□ -0.11
CCNA2P20248 TNPO2-202ENST00000425528 5122 ntAPPRIS P4 TSL 5 BASIC14.35□□□□□ -0.11
CCNA2P20248 NDRG2-226ENST00000554104 2146 ntTSL 1 (best) BASIC14.35□□□□□ -0.11
CCNA2P20248 CYP1A1-207ENST00000567032 2107 ntAPPRIS P1 TSL 1 (best) BASIC14.35□□□□□ -0.11
CCNA2P20248 ANKEF1-201ENST00000378380 5303 ntAPPRIS P1 TSL 2 BASIC14.35□□□□□ -0.11
CCNA2P20248 MCM7-202ENST00000343023 1968 ntTSL 1 (best) BASIC14.35□□□□□ -0.11
CCNA2P20248 MOSPD3-201ENST00000223054 1053 ntAPPRIS P1 TSL 2 BASIC14.35□□□□□ -0.11
CCNA2P20248 SRP19-201ENST00000282999 937 ntTSL 1 (best) BASIC14.35□□□□□ -0.11
CCNA2P20248 C16orf92-201ENST00000300575 895 ntAPPRIS P2 TSL 1 (best) BASIC14.35□□□□□ -0.11
CCNA2P20248 AL080243.2-201ENST00000418783 582 ntBASIC14.35□□□□□ -0.11
CCNA2P20248 RNASE10-202ENST00000430083 1172 ntTSL 2 BASIC14.35□□□□□ -0.11
CCNA2P20248 EEF1DP4-201ENST00000446006 880 ntBASIC14.35□□□□□ -0.11
CCNA2P20248 SSBP1-214ENST00000498107 636 ntAPPRIS P1 TSL 1 (best) BASIC14.35□□□□□ -0.11
CCNA2P20248 AP3S2-204ENST00000558011 738 ntTSL 3 BASIC14.35□□□□□ -0.11
CCNA2P20248 ZNF550-208ENST00000601415 515 ntTSL 4 BASIC14.35□□□□□ -0.11
CCNA2P20248 GRIFIN-202ENST00000614228 461 ntAPPRIS P1 TSL 5 BASIC14.35□□□□□ -0.11
CCNA2P20248 GPER1-207ENST00000619052 571 ntTSL 2 BASIC14.35□□□□□ -0.11
CCNA2P20248 MIR6069-201ENST00000620069 79 ntBASIC14.35□□□□□ -0.11
CCNA2P20248 ADI1-201ENST00000327435 2391 ntAPPRIS P1 TSL 1 (best) BASIC14.35□□□□□ -0.11
CCNA2P20248 TRPV6-201ENST00000359396 2928 ntAPPRIS ALT2 TSL 1 (best) BASIC14.35□□□□□ -0.11
CCNA2P20248 DOK5-202ENST00000395939 1453 ntTSL 1 (best) BASIC14.35□□□□□ -0.11
CCNA2P20248 CDIP1-206ENST00000563507 1463 ntTSL 2 BASIC14.35□□□□□ -0.11
CCNA2P20248 VIPAS39-202ENST00000343765 2761 ntAPPRIS P1 TSL 1 (best) BASIC14.35□□□□□ -0.11
CCNA2P20248 MLLT11-201ENST00000368921 4075 ntAPPRIS P1 TSL 1 (best) BASIC14.35□□□□□ -0.11
CCNA2P20248 LINC01138-206ENST00000622328 2212 ntTSL 2 BASIC14.35□□□□□ -0.11
CCNA2P20248 LGALSL-201ENST00000238875 3926 ntAPPRIS P1 TSL 1 (best) BASIC14.35□□□□□ -0.11
CCNA2P20248 VSIR-201ENST00000394957 4689 ntAPPRIS P1 TSL 1 (best) BASIC14.35□□□□□ -0.11
CCNA2P20248 ANKRD42-208ENST00000531895 1887 ntAPPRIS ALT2 TSL 1 (best) BASIC14.35□□□□□ -0.11
CCNA2P20248 ESR2-209ENST00000555278 1883 ntTSL 1 (best) BASIC14.35□□□□□ -0.11
CCNA2P20248 PCM1-201ENST00000325083 6820 ntAPPRIS P1 TSL 1 (best) BASIC14.35□□□□□ -0.11
Retrieved 100 of 98,524 protein–RNA pairs in 40.4 ms