Protein–RNA interactions for Protein: P16112

ACAN, Aggrecan core protein, humanhuman

Predictions only

Length 2,415 aa.

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Protein RNA Prediction (catRAPID) Interaction (ENCODE eCLIP)
Gene UniProt Accession Transcript Symbol Ensembl Transcript ID Length Transcript Status Prediction Score Prediction z-Score p-Value Fold Change
ACANP16112 AC008770.3-201ENST00000590798 1562 ntAPPRIS P1 TSL 2 BASIC12.18□□□□□ -0.46
ACANP16112 MT1E-202ENST00000330439 729 ntTSL 1 (best) BASIC12.18□□□□□ -0.46
ACANP16112 MBP-201ENST00000354542 575 ntTSL 2 BASIC12.18□□□□□ -0.46
ACANP16112 AC097059.1-201ENST00000413103 885 ntTSL 5 BASIC12.18□□□□□ -0.46
ACANP16112 KCNC4-204ENST00000438661 2953 ntAPPRIS ALT2 TSL 1 (best) BASIC12.18□□□□□ -0.46
ACANP16112 AL355803.1-201ENST00000455524 188 ntTSL 2 BASIC12.18□□□□□ -0.46
ACANP16112 RPS23-204ENST00000507980 836 ntTSL 2 BASIC12.18□□□□□ -0.46
ACANP16112 LINC02062-201ENST00000513175 478 ntTSL 3 BASIC12.18□□□□□ -0.46
ACANP16112 AC005845.1-201ENST00000539206 653 ntTSL 3 BASIC12.18□□□□□ -0.46
ACANP16112 TGFB3-204ENST00000556285 1280 ntTSL 1 (best) BASIC12.18□□□□□ -0.46
ACANP16112 AC004528.1-201ENST00000588380 641 ntTSL 5 BASIC12.18□□□□□ -0.46
ACANP16112 TREX1-206ENST00000629913 945 ntAPPRIS P1 BASIC12.18□□□□□ -0.46
ACANP16112 TTC23L-209ENST00000638320 1185 ntAPPRIS ALT2 TSL 5 BASIC12.18□□□□□ -0.46
ACANP16112 PCDHA5-202ENST00000529859 5218 ntAPPRIS P1 TSL 1 (best) BASIC12.18□□□□□ -0.46
ACANP16112 PTPA-206ENST00000358994 2664 ntAPPRIS P1 TSL 1 (best) BASIC12.18□□□□□ -0.46
ACANP16112 HNRNPR-212ENST00000606561 1837 ntTSL 2 BASIC12.18□□□□□ -0.46
ACANP16112 RTN4-204ENST00000357732 2390 ntTSL 1 (best) BASIC12.18□□□□□ -0.46
ACANP16112 GDF5-201ENST00000374369 2383 ntAPPRIS P1 TSL 1 (best) BASIC12.18□□□□□ -0.46
ACANP16112 DAG1-220ENST00000539901 5665 ntAPPRIS P1 TSL 5 BASIC12.18□□□□□ -0.46
ACANP16112 SPATA20-202ENST00000356488 2634 ntTSL 1 (best) BASIC12.18□□□□□ -0.46
ACANP16112 GPR83-201ENST00000243673 4282 ntAPPRIS P1 TSL 1 (best) BASIC12.18□□□□□ -0.46
ACANP16112 JMJD1C-202ENST00000399262 8666 ntAPPRIS P3 TSL 5 BASIC12.18□□□□□ -0.46
ACANP16112 CALCR-203ENST00000394441 1774 ntAPPRIS P3 TSL 1 (best) BASIC12.18□□□□□ -0.46
ACANP16112 PDE4A-201ENST00000293683 2583 ntAPPRIS ALT2 TSL 1 (best) BASIC12.18□□□□□ -0.46
ACANP16112 NOX5-204ENST00000455873 2277 ntAPPRIS ALT2 TSL 1 (best) BASIC12.18□□□□□ -0.46
ACANP16112 FAM214B-202ENST00000378557 3070 ntAPPRIS P1 TSL 1 (best) BASIC12.18□□□□□ -0.46
ACANP16112 PYGL-201ENST00000216392 3048 ntAPPRIS P1 TSL 1 (best) BASIC12.18□□□□□ -0.46
ACANP16112 SH2B1-203ENST00000359285 3033 ntTSL 1 (best) BASIC12.18□□□□□ -0.46
ACANP16112 TBRG4-201ENST00000258770 2243 ntAPPRIS P1 TSL 1 (best) BASIC12.18□□□□□ -0.46
ACANP16112 RAB33B-201ENST00000305626 4562 ntAPPRIS P1 TSL 1 (best) BASIC12.17□□□□□ -0.46
ACANP16112 NRXN2-202ENST00000301894 3535 ntTSL 5 BASIC12.17□□□□□ -0.46
ACANP16112 LETMD1-206ENST00000547008 1665 ntTSL 2 BASIC12.17□□□□□ -0.46
ACANP16112 STAR-201ENST00000276449 1929 ntAPPRIS P1 TSL 1 (best) BASIC12.17□□□□□ -0.46
ACANP16112 ARHGEF28-204ENST00000437974 5792 ntAPPRIS P3 TSL 1 (best) BASIC12.17□□□□□ -0.46
ACANP16112 LCK-201ENST00000333070 2166 ntTSL 1 (best) BASIC12.17□□□□□ -0.46
ACANP16112 SMIM13-202ENST00000416247 4688 ntAPPRIS P1 TSL 1 (best) BASIC12.17□□□□□ -0.46
ACANP16112 HSP90B1-201ENST00000299767 2858 ntAPPRIS P1 TSL 1 (best) BASIC12.17□□□□□ -0.46
ACANP16112 TUBB4B-201ENST00000340384 1637 ntAPPRIS P1 TSL 1 (best) BASIC12.17□□□□□ -0.46
ACANP16112 OSBPL1A-203ENST00000399441 1887 ntTSL 1 (best) BASIC12.17□□□□□ -0.46
ACANP16112 DIAPH1-201ENST00000253811 5789 ntAPPRIS ALT2 TSL 5 BASIC12.17□□□□□ -0.46
ACANP16112 DIAPH1-204ENST00000398557 5789 ntAPPRIS ALT2 TSL 5 BASIC12.17□□□□□ -0.46
ACANP16112 RABL2B-204ENST00000395593 2341 ntAPPRIS ALT2 TSL 1 (best) BASIC12.17□□□□□ -0.46
ACANP16112 CDH16-207ENST00000568632 2526 ntTSL 1 (best) BASIC12.17□□□□□ -0.46
ACANP16112 IER5-201ENST00000367577 4188 ntAPPRIS P1 BASIC12.17□□□□□ -0.46
ACANP16112 MAEA-202ENST00000303400 2222 ntAPPRIS P1 TSL 1 (best) BASIC12.17□□□□□ -0.46
ACANP16112 TMEM47-201ENST00000275954 4054 ntAPPRIS P1 TSL 1 (best) BASIC12.17□□□□□ -0.46
ACANP16112 SYTL3-203ENST00000367081 2692 ntAPPRIS P3 TSL 5 BASIC12.17□□□□□ -0.46
ACANP16112 DYNLT1-201ENST00000367085 774 ntTSL 2 BASIC12.17□□□□□ -0.46
ACANP16112 RNLS-203ENST00000437752 525 ntTSL 2 BASIC12.17□□□□□ -0.46
ACANP16112 RNA5SP417-201ENST00000516459 108 ntBASIC12.17□□□□□ -0.46
ACANP16112 AC007326.1-201ENST00000604539 458 ntBASIC12.17□□□□□ -0.46
ACANP16112 LRP4-201ENST00000378623 8076 ntAPPRIS P1 TSL 1 (best) BASIC12.17□□□□□ -0.46
ACANP16112 FAM214B-206ENST00000603301 3256 ntAPPRIS P1 TSL 1 (best) BASIC12.17□□□□□ -0.46
ACANP16112 BICRA-201ENST00000396720 5739 ntAPPRIS P2 TSL 5 BASIC12.17□□□□□ -0.46
ACANP16112 SLC6A9-207ENST00000475075 1881 ntTSL 2 BASIC12.17□□□□□ -0.46
ACANP16112 FAM20A-205ENST00000592554 2955 ntAPPRIS P1 TSL 1 (best) BASIC12.17□□□□□ -0.46
ACANP16112 PPP1R18-206ENST00000615892 1448 ntTSL 1 (best) BASIC12.17□□□□□ -0.46
ACANP16112 FMR1-215ENST00000616382 1648 ntTSL 5 BASIC12.17□□□□□ -0.46
ACANP16112 RAB23-202ENST00000468148 4837 ntAPPRIS P1 TSL 1 (best) BASIC12.17□□□□□ -0.46
ACANP16112 SLC4A3-202ENST00000317151 4069 ntAPPRIS P1 TSL 5 BASIC12.17□□□□□ -0.46
ACANP16112 VARS2-201ENST00000321897 4073 ntTSL 1 (best) BASIC12.17□□□□□ -0.46
ACANP16112 DCUN1D4-203ENST00000451288 4269 ntTSL 2 BASIC12.17□□□□□ -0.46
ACANP16112 NBL1-210ENST00000615215 2160 ntAPPRIS ALT2 TSL 1 (best) BASIC12.17□□□□□ -0.46
ACANP16112 PPP2CA-203ENST00000481195 4649 ntAPPRIS P1 TSL 1 (best) BASIC12.17□□□□□ -0.46
ACANP16112 CTSV-201ENST00000259470 1546 ntAPPRIS P1 TSL 1 (best) BASIC12.17□□□□□ -0.46
ACANP16112 TNIP1-220ENST00000610535 2726 ntTSL 5 BASIC12.17□□□□□ -0.46
ACANP16112 SLC39A8-201ENST00000356736 3144 ntAPPRIS P1 TSL 1 (best) BASIC12.17□□□□□ -0.46
ACANP16112 CACNA2D3-201ENST00000288197 3671 ntAPPRIS ALT2 TSL 1 (best) BASIC12.17□□□□□ -0.46
ACANP16112 CACNA2D3-206ENST00000474759 3675 ntAPPRIS P2 TSL 1 (best) BASIC12.17□□□□□ -0.46
ACANP16112 CMKLR1-206ENST00000552995 1890 ntAPPRIS P3 TSL 1 (best) BASIC12.17□□□□□ -0.46
ACANP16112 XPNPEP2-201ENST00000371105 912 ntTSL 2 BASIC12.17□□□□□ -0.46
ACANP16112 PRTFDC1-202ENST00000376376 741 ntTSL 2 BASIC12.17□□□□□ -0.46
ACANP16112 CTHRC1-202ENST00000415886 571 ntTSL 2 BASIC12.17□□□□□ -0.46
ACANP16112 CSTF3-202ENST00000431742 715 ntTSL 2 BASIC12.17□□□□□ -0.46
ACANP16112 PMEL-214ENST00000550447 901 ntTSL 3 BASIC12.17□□□□□ -0.46
ACANP16112 AC018846.1-201ENST00000568231 183 ntBASIC12.17□□□□□ -0.46
ACANP16112 TNFRSF12A-204ENST00000573001 648 ntTSL 3 BASIC12.17□□□□□ -0.46
ACANP16112 AL078590.3-205ENST00000606039 465 ntTSL 5 BASIC12.17□□□□□ -0.46
ACANP16112 ARL16-215ENST00000622299 1053 ntAPPRIS P1 TSL 1 (best) BASIC12.17□□□□□ -0.46
ACANP16112 RASSF8-AS1-202ENST00000500276 2610 ntTSL 2 BASIC12.17□□□□□ -0.46
ACANP16112 BMP1-203ENST00000354870 3989 ntTSL 5 BASIC12.17□□□□□ -0.46
ACANP16112 WIF1-201ENST00000286574 2238 ntAPPRIS P1 TSL 1 (best) BASIC12.17□□□□□ -0.46
ACANP16112 TRIM62-204ENST00000543586 1638 ntTSL 2 BASIC12.17□□□□□ -0.46
ACANP16112 SLC6A9-202ENST00000360584 2330 ntTSL 1 (best) BASIC12.16□□□□□ -0.46
ACANP16112 CDH24-201ENST00000267383 2873 ntTSL 1 (best) BASIC12.16□□□□□ -0.46
ACANP16112 SERPINB9P1-202ENST00000545177 1375 ntTSL 3 BASIC12.16□□□□□ -0.46
ACANP16112 OXA1L-201ENST00000285848 1719 ntTSL 1 (best) BASIC12.16□□□□□ -0.46
ACANP16112 HSPA12B-201ENST00000254963 3151 ntAPPRIS P1 TSL 1 (best) BASIC12.16□□□□□ -0.46
ACANP16112 TVP23B-201ENST00000307767 2064 ntAPPRIS P2 TSL 1 (best) BASIC12.16□□□□□ -0.46
ACANP16112 CCDC43-202ENST00000457422 2058 ntTSL 1 (best) BASIC12.16□□□□□ -0.46
ACANP16112 RAPGEFL1-209ENST00000544503 2079 ntTSL 2 BASIC12.16□□□□□ -0.46
ACANP16112 RNF222-201ENST00000344001 2786 ntAPPRIS P1 BASIC12.16□□□□□ -0.46
ACANP16112 USH1C-202ENST00000318024 2237 ntAPPRIS ALT2 TSL 1 (best) BASIC12.16□□□□□ -0.46
ACANP16112 ABCB7-201ENST00000253577 2377 ntAPPRIS P3 TSL 1 (best) BASIC12.16□□□□□ -0.46
ACANP16112 SMARCD1-201ENST00000381513 3237 ntTSL 1 (best) BASIC12.16□□□□□ -0.46
ACANP16112 CNKSR1-214ENST00000531191 2673 ntTSL 5 BASIC12.16□□□□□ -0.46
ACANP16112 SLC35A3-221ENST00000640600 3341 ntTSL 5 BASIC12.16□□□□□ -0.46
ACANP16112 AGGF1P2-201ENST00000426656 2106 ntBASIC12.16□□□□□ -0.46
ACANP16112 AC093673.1-201ENST00000429630 648 ntTSL 2 BASIC12.16□□□□□ -0.46
ACANP16112 AL512306.1-201ENST00000432698 848 ntBASIC12.16□□□□□ -0.46
Retrieved 100 of 98,524 protein–RNA pairs in 54.5 ms