Protein–RNA interactions for Protein: O60494

CUBN, Cubilin, humanhuman

Predictions only

Length 3,623 aa.

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Protein RNA Prediction (catRAPID) Interaction (ENCODE eCLIP)
Gene UniProt Accession Transcript Symbol Ensembl Transcript ID Length Transcript Status Prediction Score Prediction z-Score p-Value Fold Change
CUBNO60494 PSMD5-208ENST00000625444 219 ntTSL 5 BASIC11.81□□□□□ -0.52
CUBNO60494 TNFRSF14-AS1-202ENST00000432521 3608 ntTSL 2 BASIC11.81□□□□□ -0.52
CUBNO60494 ASAP3-212ENST00000618240 2226 ntTSL 5 BASIC11.81□□□□□ -0.52
CUBNO60494 EXOG-201ENST00000287675 2792 ntAPPRIS P1 TSL 1 (best) BASIC11.81□□□□□ -0.52
CUBNO60494 CRLF2-201ENST00000381566 1545 ntAPPRIS P1 TSL 5 BASIC11.81□□□□□ -0.52
CUBNO60494 C3orf52-202ENST00000431717 2054 ntAPPRIS ALT2 TSL 2 BASIC11.81□□□□□ -0.52
CUBNO60494 HORMAD1-201ENST00000322343 1771 ntTSL 1 (best) BASIC11.81□□□□□ -0.52
CUBNO60494 LINC00528-201ENST00000600723 2160 ntBASIC11.81□□□□□ -0.52
CUBNO60494 TNFRSF13C-201ENST00000291232 3944 ntAPPRIS P1 TSL 1 (best) BASIC11.81□□□□□ -0.52
CUBNO60494 SETD6-203ENST00000394266 3423 ntTSL 5 BASIC11.81□□□□□ -0.52
CUBNO60494 VSTM2A-204ENST00000407838 3112 ntAPPRIS P1 TSL 3 BASIC11.8□□□□□ -0.52
CUBNO60494 BTBD8-201ENST00000342818 1412 ntAPPRIS P1 TSL 1 (best) BASIC11.8□□□□□ -0.52
CUBNO60494 DIO1-203ENST00000388876 606 ntTSL 1 (best) BASIC11.8□□□□□ -0.52
CUBNO60494 CCDC18-AS1-219ENST00000451302 1212 ntTSL 3 BASIC11.8□□□□□ -0.52
CUBNO60494 AC007319.1-201ENST00000453517 802 ntTSL 3 BASIC11.8□□□□□ -0.52
CUBNO60494 RPP40-203ENST00000464646 1042 ntTSL 5 BASIC11.8□□□□□ -0.52
CUBNO60494 AC113391.2-201ENST00000512245 553 ntTSL 4 BASIC11.8□□□□□ -0.52
CUBNO60494 DIO1-204ENST00000524406 626 ntTSL 1 (best) BASIC11.8□□□□□ -0.52
CUBNO60494 DIO1-213ENST00000532493 406 ntTSL 1 (best) BASIC11.8□□□□□ -0.52
CUBNO60494 AC090001.1-201ENST00000553194 467 ntTSL 3 BASIC11.8□□□□□ -0.52
CUBNO60494 AC004686.1-201ENST00000605113 538 ntBASIC11.8□□□□□ -0.52
CUBNO60494 AC011471.3-201ENST00000623576 402 ntBASIC11.8□□□□□ -0.52
CUBNO60494 TREX1-206ENST00000629913 945 ntAPPRIS P1 BASIC11.8□□□□□ -0.52
CUBNO60494 ADSL-201ENST00000216194 1620 ntTSL 2 BASIC11.8□□□□□ -0.52
CUBNO60494 MAGEB2-201ENST00000378988 1610 ntAPPRIS P1 TSL 1 (best) BASIC11.8□□□□□ -0.52
CUBNO60494 GRAMD1C-201ENST00000358160 4177 ntAPPRIS P1 TSL 1 (best) BASIC11.8□□□□□ -0.52
CUBNO60494 WNT10B-203ENST00000407467 1802 ntTSL 2 BASIC11.8□□□□□ -0.52
CUBNO60494 SCNN1D-205ENST00000379116 3044 ntAPPRIS P2 TSL 5 BASIC11.8□□□□□ -0.52
CUBNO60494 MED16-207ENST00000589119 2772 ntAPPRIS P2 TSL 1 (best) BASIC11.8□□□□□ -0.52
CUBNO60494 ALOX12B-201ENST00000319144 2502 ntAPPRIS P1 TSL 1 (best) BASIC11.8□□□□□ -0.52
CUBNO60494 PRKCZ-202ENST00000400921 2294 ntTSL 1 (best) BASIC11.8□□□□□ -0.52
CUBNO60494 OIT3-202ENST00000622652 1602 ntTSL 1 (best) BASIC11.8□□□□□ -0.52
CUBNO60494 GTF3C6-201ENST00000329970 952 ntAPPRIS P1 TSL 1 (best) BASIC11.8□□□□□ -0.52
CUBNO60494 AC106827.1-201ENST00000366454 431 ntBASIC11.8□□□□□ -0.52
CUBNO60494 C14orf178-202ENST00000439131 632 ntAPPRIS ALT2 TSL 1 (best) BASIC11.8□□□□□ -0.52
CUBNO60494 PTPN20CP-201ENST00000614090 920 ntBASIC11.8□□□□□ -0.52
CUBNO60494 AP001184.1-201ENST00000637936 376 ntBASIC11.8□□□□□ -0.52
CUBNO60494 CSAG3-203ENST00000638835 793 ntAPPRIS ALT2 TSL 1 (best) BASIC11.8□□□□□ -0.52
CUBNO60494 CSAG2-204ENST00000640702 793 ntAPPRIS ALT2 TSL 1 (best) BASIC11.8□□□□□ -0.52
CUBNO60494 UPK1A-203ENST00000616789 1366 ntTSL 5 BASIC11.8□□□□□ -0.52
CUBNO60494 DNMT3L-204ENST00000628202 1364 ntAPPRIS ALT2 TSL 1 (best) BASIC11.8□□□□□ -0.52
CUBNO60494 MMP25-201ENST00000336577 3554 ntAPPRIS P1 TSL 1 (best) BASIC11.8□□□□□ -0.52
CUBNO60494 ST3GAL5-229ENST00000638986 2331 ntAPPRIS ALT2 TSL 5 BASIC11.8□□□□□ -0.52
CUBNO60494 UROD-201ENST00000246337 1300 ntAPPRIS P1 TSL 1 (best) BASIC11.8□□□□□ -0.52
CUBNO60494 PSTPIP1-207ENST00000559295 1349 ntTSL 1 (best) BASIC11.8□□□□□ -0.52
CUBNO60494 TMEM189-203ENST00000371656 1973 ntTSL 2 BASIC11.8□□□□□ -0.52
CUBNO60494 EMP1-211ENST00000544053 1436 ntTSL 1 (best) BASIC11.8□□□□□ -0.52
CUBNO60494 FGD4-203ENST00000472289 1629 ntTSL 2 BASIC11.8□□□□□ -0.52
CUBNO60494 TFE3-201ENST00000315869 3415 ntAPPRIS P1 TSL 1 (best) BASIC11.8□□□□□ -0.52
CUBNO60494 RAB9A-202ENST00000464506 2039 ntAPPRIS P1 TSL 1 (best) BASIC11.8□□□□□ -0.52
CUBNO60494 RPL9-203ENST00000449470 1127 ntAPPRIS P1 TSL 1 (best) BASIC11.8□□□□□ -0.52
CUBNO60494 PRRC2B-207ENST00000458550 899 ntTSL 1 (best) BASIC11.8□□□□□ -0.52
CUBNO60494 C14orf132-204ENST00000556728 774 ntAPPRIS P1 TSL 2 BASIC11.8□□□□□ -0.52
CUBNO60494 AC100827.2-201ENST00000563214 1194 ntBASIC11.8□□□□□ -0.52
CUBNO60494 TXNDC17-208ENST00000574838 746 ntTSL 3 BASIC11.8□□□□□ -0.52
CUBNO60494 NPL-204ENST00000367554 3027 ntTSL 1 (best) BASIC11.8□□□□□ -0.52
CUBNO60494 LIMS1-202ENST00000338045 1876 ntTSL 1 (best) BASIC11.8□□□□□ -0.52
CUBNO60494 RUSC1-203ENST00000368349 1968 ntAPPRIS P3 TSL 1 (best) BASIC11.8□□□□□ -0.52
CUBNO60494 PPM1B-204ENST00000378551 3877 ntAPPRIS ALT1 TSL 1 (best) BASIC11.8□□□□□ -0.52
CUBNO60494 LINC01815-202ENST00000641468 1409 ntBASIC11.8□□□□□ -0.52
CUBNO60494 ARHGEF7-202ENST00000317133 4361 ntAPPRIS ALT2 TSL 1 (best) BASIC11.8□□□□□ -0.52
CUBNO60494 TTC29-202ENST00000398886 1729 ntAPPRIS ALT2 TSL 5 BASIC11.79□□□□□ -0.52
CUBNO60494 ILF2-205ENST00000615950 1906 ntTSL 2 BASIC11.79□□□□□ -0.52
CUBNO60494 CBX8-201ENST00000269385 3791 ntAPPRIS P1 TSL 1 (best) BASIC11.79□□□□□ -0.52
CUBNO60494 FEN1-201ENST00000305885 2296 ntAPPRIS P1 TSL 1 (best) BASIC11.79□□□□□ -0.52
CUBNO60494 TLX1NB-202ENST00000445873 1862 ntTSL 1 (best) BASIC11.79□□□□□ -0.52
CUBNO60494 RNA5SP359-201ENST00000364838 113 ntBASIC11.79□□□□□ -0.52
CUBNO60494 LINC00173-201ENST00000470091 435 ntTSL 1 (best) BASIC11.79□□□□□ -0.52
CUBNO60494 FXYD6-FXYD2-201ENST00000532984 670 ntTSL 3 BASIC11.79□□□□□ -0.52
CUBNO60494 ARNTL-205ENST00000403510 2745 ntTSL 2 BASIC11.79□□□□□ -0.52
CUBNO60494 NR2C1-201ENST00000330677 2014 ntTSL 5 BASIC11.79□□□□□ -0.52
CUBNO60494 VRK3-207ENST00000594092 1831 ntAPPRIS ALT2 TSL 1 (best) BASIC11.79□□□□□ -0.52
CUBNO60494 DDR1-271ENST00000513240 2882 ntAPPRIS ALT2 TSL 5 BASIC11.79□□□□□ -0.52
CUBNO60494 CDR2L-201ENST00000337231 3536 ntAPPRIS P1 TSL 1 (best) BASIC11.79□□□□□ -0.52
CUBNO60494 SKOR1-201ENST00000341418 3332 ntAPPRIS P2 TSL 1 (best) BASIC11.79□□□□□ -0.52
CUBNO60494 COQ8B-202ENST00000324464 2443 ntAPPRIS P3 TSL 1 (best) BASIC11.79□□□□□ -0.52
CUBNO60494 C15orf38-AP3S2-201ENST00000398333 2439 ntAPPRIS P1 TSL 2 BASIC11.79□□□□□ -0.52
CUBNO60494 RAPSN-201ENST00000298854 1671 ntAPPRIS P1 TSL 1 (best) BASIC11.79□□□□□ -0.52
CUBNO60494 ADAM15-201ENST00000271836 2799 ntAPPRIS ALT2 TSL 1 (best) BASIC11.79□□□□□ -0.52
CUBNO60494 SUPT4H1-201ENST00000225504 1489 ntAPPRIS P1 TSL 1 (best) BASIC11.79□□□□□ -0.52
CUBNO60494 GHDC-202ENST00000414034 2496 ntTSL 2 BASIC11.79□□□□□ -0.52
CUBNO60494 RHOG-203ENST00000396979 1289 ntAPPRIS P1 TSL 3 BASIC11.79□□□□□ -0.52
CUBNO60494 AC156455.1-203ENST00000423999 893 ntTSL 2 BASIC11.79□□□□□ -0.52
CUBNO60494 CSTF3-202ENST00000431742 715 ntTSL 2 BASIC11.79□□□□□ -0.52
CUBNO60494 DUTP3-201ENST00000450025 415 ntBASIC11.79□□□□□ -0.52
CUBNO60494 RHOG-204ENST00000533217 886 ntAPPRIS P1 TSL 5 BASIC11.79□□□□□ -0.52
CUBNO60494 AC093752.3-201ENST00000567343 901 ntBASIC11.79□□□□□ -0.52
CUBNO60494 MIR3180-2-201ENST00000581748 88 ntBASIC11.79□□□□□ -0.52
CUBNO60494 CDCA2-201ENST00000330560 3731 ntAPPRIS P3 TSL 1 (best) BASIC11.79□□□□□ -0.52
CUBNO60494 PBXIP1-202ENST00000368463 3212 ntAPPRIS P3 TSL 1 (best) BASIC11.79□□□□□ -0.52
CUBNO60494 ASIC4-201ENST00000347842 2684 ntAPPRIS P2 TSL 1 (best) BASIC11.79□□□□□ -0.52
CUBNO60494 RASGEF1B-202ENST00000335927 1756 ntTSL 1 (best) BASIC11.79□□□□□ -0.52
CUBNO60494 BUD13-202ENST00000375445 1793 ntAPPRIS ALT2 TSL 1 (best) BASIC11.79□□□□□ -0.52
CUBNO60494 LRP10-203ENST00000546834 1780 ntAPPRIS ALT2 TSL 5 BASIC11.79□□□□□ -0.52
CUBNO60494 DGKI-201ENST00000288490 3895 ntAPPRIS P3 TSL 5 BASIC11.79□□□□□ -0.52
CUBNO60494 TMCO5B-204ENST00000529696 1568 ntTSL 2 BASIC11.79□□□□□ -0.52
CUBNO60494 MTHFR-217ENST00000641820 1569 ntBASIC11.79□□□□□ -0.52
CUBNO60494 ANKMY1-207ENST00000403283 2874 ntTSL 1 (best) BASIC11.79□□□□□ -0.52
CUBNO60494 CADM3-201ENST00000368124 2546 ntAPPRIS P3 TSL 1 (best) BASIC11.79□□□□□ -0.52
CUBNO60494 GHDC-203ENST00000428494 2518 ntTSL 5 BASIC11.79□□□□□ -0.52
Retrieved 100 of 98,524 protein–RNA pairs in 55.2 ms