Protein–RNA interactions for Protein: Q9Y2Q9

MRPS28, 28S ribosomal protein S28, mitochondrial, humanhuman

Known RBP Predictions only

Length 187 aa.

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Protein RNA Prediction (catRAPID) Interaction (ENCODE eCLIP)
Gene UniProt Accession Transcript Symbol Ensembl Transcript ID Length Transcript Status Prediction Score Prediction z-Score p-Value Fold Change
MRPS28Q9Y2Q9 PXMP2-201ENST00000317479 957 ntAPPRIS P1 TSL 1 (best) BASIC19.73■□□□□ 0.75
MRPS28Q9Y2Q9 YPEL1-202ENST00000403503 466 ntTSL 3 BASIC19.73■□□□□ 0.75
MRPS28Q9Y2Q9 FAM159A-204ENST00000517870 748 ntAPPRIS P1 TSL 1 (best) BASIC19.73■□□□□ 0.75
MRPS28Q9Y2Q9 MANF-204ENST00000528157 1153 ntAPPRIS P1 TSL 1 (best) BASIC19.73■□□□□ 0.75
MRPS28Q9Y2Q9 CDC16-203ENST00000356221 2203 ntAPPRIS P3 TSL 1 (best) BASIC19.73■□□□□ 0.75
MRPS28Q9Y2Q9 NIPSNAP2-201ENST00000322090 1999 ntAPPRIS P1 TSL 1 (best) BASIC19.73■□□□□ 0.75
MRPS28Q9Y2Q9 MATK-204ENST00000585778 1994 ntAPPRIS ALT2 TSL 1 (best) BASIC19.73■□□□□ 0.75
MRPS28Q9Y2Q9 AC090877.2-201ENST00000558441 1738 ntBASIC19.73■□□□□ 0.75
MRPS28Q9Y2Q9 OSCAR-209ENST00000616215 2016 ntAPPRIS ALT2 TSL 5 BASIC19.73■□□□□ 0.75
MRPS28Q9Y2Q9 DONSON-201ENST00000303071 2170 ntAPPRIS P1 TSL 1 (best) BASIC19.73■□□□□ 0.75
MRPS28Q9Y2Q9 STOML1-201ENST00000316900 2169 ntTSL 2 BASIC19.73■□□□□ 0.75
MRPS28Q9Y2Q9 ARL6IP4-210ENST00000453766 1491 ntAPPRIS ALT2 TSL 1 (best) BASIC19.73■□□□□ 0.75
MRPS28Q9Y2Q9 PSMG3-202ENST00000288607 1391 ntAPPRIS P1 TSL 1 (best) BASIC19.72■□□□□ 0.75
MRPS28Q9Y2Q9 NR6A1-201ENST00000344523 1846 ntAPPRIS ALT2 TSL 5 BASIC19.72■□□□□ 0.75
MRPS28Q9Y2Q9 BIN1-207ENST00000357970 2497 ntTSL 1 (best) BASIC19.72■□□□□ 0.75
MRPS28Q9Y2Q9 FAM136A-202ENST00000430566 885 ntTSL 3 BASIC19.72■□□□□ 0.75
MRPS28Q9Y2Q9 PITX3-202ENST00000539804 1187 ntAPPRIS P1 TSL 5 BASIC19.72■□□□□ 0.75
MRPS28Q9Y2Q9 DHH-201ENST00000266991 1936 ntAPPRIS P1 TSL 1 (best) BASIC19.72■□□□□ 0.75
MRPS28Q9Y2Q9 HACD3-205ENST00000562901 1797 ntTSL 5 BASIC19.72■□□□□ 0.75
MRPS28Q9Y2Q9 MFSD7-201ENST00000322224 2123 ntAPPRIS P3 TSL 1 (best) BASIC19.72■□□□□ 0.75
MRPS28Q9Y2Q9 SPNS1-207ENST00000565975 1979 ntTSL 1 (best) BASIC19.72■□□□□ 0.75
MRPS28Q9Y2Q9 OSCAR-207ENST00000391761 1826 ntAPPRIS ALT2 TSL 1 (best) BASIC19.72■□□□□ 0.75
MRPS28Q9Y2Q9 AKT1-201ENST00000349310 2866 ntAPPRIS P1 TSL 1 (best) BASIC19.71■□□□□ 0.75
MRPS28Q9Y2Q9 HAS1-201ENST00000222115 2087 ntAPPRIS P3 TSL 1 (best) BASIC19.71■□□□□ 0.75
MRPS28Q9Y2Q9 SEPT4-205ENST00000426861 1906 ntTSL 1 (best) BASIC19.71■□□□□ 0.75
MRPS28Q9Y2Q9 ST8SIA6-201ENST00000377602 2276 ntAPPRIS P1 TSL 1 (best) BASIC19.71■□□□□ 0.75
MRPS28Q9Y2Q9 TMED4-205ENST00000481238 1755 ntTSL 1 (best) BASIC19.71■□□□□ 0.75
MRPS28Q9Y2Q9 RAB6B-203ENST00000469959 500 ntTSL 3 BASIC19.71■□□□□ 0.75
MRPS28Q9Y2Q9 CLDND1-226ENST00000513287 999 ntAPPRIS P1 TSL 2 BASIC19.71■□□□□ 0.75
MRPS28Q9Y2Q9 EIF5A-208ENST00000573542 1089 ntAPPRIS P1 TSL 2 BASIC19.71■□□□□ 0.75
MRPS28Q9Y2Q9 R3HDM4-208ENST00000626716 138 ntTSL 5 BASIC19.71■□□□□ 0.75
MRPS28Q9Y2Q9 ST3GAL5-231ENST00000639119 2131 ntTSL 5 BASIC19.71■□□□□ 0.75
MRPS28Q9Y2Q9 RBM4B-203ENST00000525754 2339 ntAPPRIS P1 TSL 2 BASIC19.71■□□□□ 0.75
MRPS28Q9Y2Q9 MAGED2-206ENST00000375068 2189 ntAPPRIS P2 TSL 1 (best) BASIC19.71■□□□□ 0.75
MRPS28Q9Y2Q9 B3GALNT2-202ENST00000366600 2015 ntAPPRIS P1 TSL 1 (best) BASIC19.71■□□□□ 0.75
MRPS28Q9Y2Q9 WHAMM-201ENST00000286760 5101 ntAPPRIS P1 TSL 1 (best) BASIC19.71■□□□□ 0.75
MRPS28Q9Y2Q9 DGAT2-201ENST00000228027 2453 ntAPPRIS P1 TSL 1 (best) BASIC19.7■□□□□ 0.74
MRPS28Q9Y2Q9 PTGES2-202ENST00000338961 2331 ntAPPRIS P1 TSL 1 (best) BASIC19.7■□□□□ 0.74
MRPS28Q9Y2Q9 ZNF837-202ENST00000597582 1969 ntAPPRIS P1 TSL 2 BASIC19.7■□□□□ 0.74
MRPS28Q9Y2Q9 RABEP2-201ENST00000357573 2175 ntTSL 1 (best) BASIC19.7■□□□□ 0.74
MRPS28Q9Y2Q9 DMRT2-209ENST00000635183 2190 ntTSL 5 BASIC19.7■□□□□ 0.74
MRPS28Q9Y2Q9 PCK2-201ENST00000216780 2357 ntAPPRIS P1 TSL 1 (best) BASIC19.7■□□□□ 0.74
MRPS28Q9Y2Q9 STMN4-204ENST00000519997 1623 ntTSL 2 BASIC19.7■□□□□ 0.74
MRPS28Q9Y2Q9 NKX2-5-204ENST00000521848 1027 ntTSL 2 BASIC19.7■□□□□ 0.74
MRPS28Q9Y2Q9 SOCS2-202ENST00000536696 1065 ntAPPRIS P1 TSL 2 BASIC19.7■□□□□ 0.74
MRPS28Q9Y2Q9 AC018755.3-202ENST00000596210 929 ntBASIC19.7■□□□□ 0.74
MRPS28Q9Y2Q9 SMARCB1-201ENST00000263121 1690 ntAPPRIS P3 TSL 1 (best) BASIC19.7■□□□□ 0.74
MRPS28Q9Y2Q9 USF3-203ENST00000491165 2133 ntAPPRIS ALT2 TSL 1 (best) BASIC19.7■□□□□ 0.74
MRPS28Q9Y2Q9 BTBD6-201ENST00000327471 1948 ntAPPRIS ALT2 TSL 2 BASIC19.7■□□□□ 0.74
MRPS28Q9Y2Q9 PON2-202ENST00000433091 1726 ntTSL 1 (best) BASIC19.7■□□□□ 0.74
MRPS28Q9Y2Q9 C7orf25-205ENST00000438029 1743 ntAPPRIS P1 TSL 2 BASIC19.7■□□□□ 0.74
MRPS28Q9Y2Q9 NAAA-204ENST00000507187 1750 ntTSL 1 (best) BASIC19.7■□□□□ 0.74
MRPS28Q9Y2Q9 MROH6-202ENST00000524906 1794 ntAPPRIS ALT2 TSL 3 BASIC19.7■□□□□ 0.74
MRPS28Q9Y2Q9 TRIM72-202ENST00000613872 1573 ntTSL 1 (best) BASIC19.7■□□□□ 0.74
MRPS28Q9Y2Q9 POU4F1-201ENST00000377208 4547 ntAPPRIS P1 TSL 1 (best) BASIC19.7■□□□□ 0.74
MRPS28Q9Y2Q9 LGR4-201ENST00000379214 5206 ntAPPRIS P1 TSL 1 (best) BASIC19.69■□□□□ 0.74
MRPS28Q9Y2Q9 ADARB2-202ENST00000381310 1810 ntTSL 1 (best) BASIC19.69■□□□□ 0.74
MRPS28Q9Y2Q9 C21orf2-203ENST00000397956 1634 ntAPPRIS ALT2 TSL 1 (best) BASIC19.69■□□□□ 0.74
MRPS28Q9Y2Q9 PEX10-204ENST00000507596 1941 ntAPPRIS ALT1 TSL 5 BASIC19.69■□□□□ 0.74
MRPS28Q9Y2Q9 CCR10-203ENST00000591765 1942 ntTSL 3 BASIC19.69■□□□□ 0.74
MRPS28Q9Y2Q9 PTPRJ-201ENST00000418331 5122 ntAPPRIS P2 TSL 1 (best) BASIC19.69■□□□□ 0.74
MRPS28Q9Y2Q9 CYP2A13-201ENST00000330436 1739 ntAPPRIS P1 TSL 1 (best) BASIC19.69■□□□□ 0.74
MRPS28Q9Y2Q9 TMEM102-202ENST00000396568 1962 ntAPPRIS P1 TSL 2 BASIC19.69■□□□□ 0.74
MRPS28Q9Y2Q9 ADSSL1-201ENST00000330877 1766 ntAPPRIS P1 TSL 1 (best) BASIC19.69■□□□□ 0.74
MRPS28Q9Y2Q9 PKM-201ENST00000319622 2717 ntAPPRIS P5 TSL 2 BASIC19.69■□□□□ 0.74
MRPS28Q9Y2Q9 DTNB-206ENST00000404103 2384 ntAPPRIS ALT2 TSL 5 BASIC19.69■□□□□ 0.74
MRPS28Q9Y2Q9 AC079834.2-201ENST00000609776 1949 ntBASIC19.68■□□□□ 0.74
MRPS28Q9Y2Q9 SLIT1-203ENST00000371041 1695 ntTSL 2 BASIC19.68■□□□□ 0.74
MRPS28Q9Y2Q9 FBXO7-206ENST00000452138 1535 ntTSL 2 BASIC19.68■□□□□ 0.74
MRPS28Q9Y2Q9 C19orf12-207ENST00000592153 1504 ntTSL 1 (best) BASIC19.68■□□□□ 0.74
MRPS28Q9Y2Q9 KLC1-227ENST00000634686 2229 ntTSL 5 BASIC19.68■□□□□ 0.74
MRPS28Q9Y2Q9 NAPRT-204ENST00000449291 1965 ntAPPRIS P1 TSL 1 (best) BASIC19.68■□□□□ 0.74
MRPS28Q9Y2Q9 HOMER3-201ENST00000221222 1384 ntAPPRIS ALT1 TSL 5 BASIC19.68■□□□□ 0.74
MRPS28Q9Y2Q9 ADSS-201ENST00000366535 2780 ntAPPRIS P1 TSL 1 (best) BASIC19.67■□□□□ 0.74
MRPS28Q9Y2Q9 NEURL4-202ENST00000399464 5200 ntAPPRIS P4 TSL 1 (best) BASIC19.67■□□□□ 0.74
MRPS28Q9Y2Q9 LINGO3-201ENST00000585527 2241 ntAPPRIS P1 BASIC19.67■□□□□ 0.74
MRPS28Q9Y2Q9 STRBP-202ENST00000360998 2990 ntTSL 1 (best) BASIC19.67■□□□□ 0.74
MRPS28Q9Y2Q9 POU2F3-206ENST00000543440 1953 ntAPPRIS P1 TSL 1 (best) BASIC19.67■□□□□ 0.74
MRPS28Q9Y2Q9 CAPNS1-207ENST00000589146 578 ntTSL 3 BASIC19.67■□□□□ 0.74
MRPS28Q9Y2Q9 MDFIC-208ENST00000614186 1068 ntTSL 1 (best) BASIC19.67■□□□□ 0.74
MRPS28Q9Y2Q9 AC098864.1-205ENST00000315302 2260 ntTSL 2 BASIC19.66■□□□□ 0.74
MRPS28Q9Y2Q9 AL592295.1-201ENST00000400984 884 ntBASIC19.66■□□□□ 0.74
MRPS28Q9Y2Q9 SSSCA1-AS1-201ENST00000567594 614 ntBASIC19.66■□□□□ 0.74
MRPS28Q9Y2Q9 FGF22-202ENST00000586042 1288 ntTSL 1 (best) BASIC19.66■□□□□ 0.74
MRPS28Q9Y2Q9 UBE2E3-213ENST00000602959 909 ntAPPRIS P1 TSL 5 BASIC19.66■□□□□ 0.74
MRPS28Q9Y2Q9 ANOS2P-203ENST00000472227 1816 ntBASIC19.66■□□□□ 0.74
MRPS28Q9Y2Q9 RNF126P1-201ENST00000567452 1320 ntBASIC19.66■□□□□ 0.74
MRPS28Q9Y2Q9 AL161729.1-201ENST00000604104 1402 ntBASIC19.66■□□□□ 0.74
MRPS28Q9Y2Q9 DNAAF3-203ENST00000524407 2059 ntAPPRIS ALT2 TSL 1 (best) BASIC19.66■□□□□ 0.74
MRPS28Q9Y2Q9 MTERF3-204ENST00000523821 1529 ntTSL 1 (best) BASIC19.66■□□□□ 0.74
MRPS28Q9Y2Q9 NKX2-1-201ENST00000354822 2191 ntTSL 1 (best) BASIC19.66■□□□□ 0.74
MRPS28Q9Y2Q9 SLC2A8-203ENST00000373371 2172 ntAPPRIS P1 TSL 1 (best) BASIC19.66■□□□□ 0.74
MRPS28Q9Y2Q9 SPAG7-205ENST00000573366 1668 ntTSL 3 BASIC19.65■□□□□ 0.74
MRPS28Q9Y2Q9 RILP-201ENST00000301336 1771 ntAPPRIS P1 TSL 1 (best) BASIC19.65■□□□□ 0.74
MRPS28Q9Y2Q9 KCTD8-201ENST00000360029 2587 ntAPPRIS P1 TSL 1 (best) BASIC19.65■□□□□ 0.74
MRPS28Q9Y2Q9 ASAP2-201ENST00000281419 5712 ntAPPRIS P3 TSL 1 (best) BASIC19.65■□□□□ 0.74
MRPS28Q9Y2Q9 SCRT2-201ENST00000246104 3577 ntAPPRIS P1 TSL 1 (best) BASIC19.65■□□□□ 0.74
MRPS28Q9Y2Q9 MPC1-201ENST00000341756 976 ntTSL 1 (best) BASIC19.65■□□□□ 0.74
MRPS28Q9Y2Q9 RPS2-201ENST00000343262 985 ntAPPRIS P1 TSL 1 (best) BASIC19.65■□□□□ 0.74
MRPS28Q9Y2Q9 MTMR14-202ENST00000351233 2105 ntAPPRIS ALT2 TSL 1 (best) BASIC19.65■□□□□ 0.74
Retrieved 100 of 98,524 protein–RNA pairs in 15 ms