Protein–RNA interactions for Protein: Q9H467

CUEDC2, CUE domain-containing protein 2, humanhuman

Predictions only

Length 287 aa.

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Protein RNA Prediction (catRAPID) Interaction (ENCODE eCLIP)
Gene UniProt Accession Transcript Symbol Ensembl Transcript ID Length Transcript Status Prediction Score Prediction z-Score p-Value Fold Change
CUEDC2Q9H467 TSPAN10-204ENST00000611590 1068 ntAPPRIS ALT2 TSL 1 (best) BASIC25.72■■□□□ 1.71
CUEDC2Q9H467 PTOV1-220ENST00000601675 1587 ntAPPRIS P1 TSL 1 (best) BASIC25.72■■□□□ 1.71
CUEDC2Q9H467 MMD-201ENST00000262065 2735 ntAPPRIS P1 TSL 1 (best) BASIC25.72■■□□□ 1.71
CUEDC2Q9H467 USF2-201ENST00000222305 1634 ntAPPRIS P1 TSL 1 (best) BASIC25.71■■□□□ 1.71
CUEDC2Q9H467 PSIP1-202ENST00000380716 1889 ntTSL 5 BASIC25.71■■□□□ 1.71
CUEDC2Q9H467 AF131216.4-201ENST00000638924 1588 ntBASIC25.71■■□□□ 1.71
CUEDC2Q9H467 PARP9-207ENST00000492382 1837 ntTSL 1 (best) BASIC25.71■■□□□ 1.71
CUEDC2Q9H467 TRAP1-202ENST00000538171 2052 ntTSL 2 BASIC25.71■■□□□ 1.71
CUEDC2Q9H467 NAAA-204ENST00000507187 1750 ntTSL 1 (best) BASIC25.71■■□□□ 1.71
CUEDC2Q9H467 NAGLU-201ENST00000225927 2544 ntAPPRIS P1 TSL 1 (best) BASIC25.71■■□□□ 1.71
CUEDC2Q9H467 PON2-202ENST00000433091 1726 ntTSL 1 (best) BASIC25.71■■□□□ 1.71
CUEDC2Q9H467 NKX2-3-202ENST00000622383 1986 ntTSL 5 BASIC25.71■■□□□ 1.71
CUEDC2Q9H467 EPB41L4B-202ENST00000374566 5800 ntAPPRIS P4 TSL 1 (best) BASIC25.71■■□□□ 1.71
CUEDC2Q9H467 C6orf201-202ENST00000380175 1834 ntAPPRIS P1 TSL 1 (best) BASIC25.7■■□□□ 1.71
CUEDC2Q9H467 SLC10A4-201ENST00000273861 1790 ntAPPRIS P1 TSL 1 (best) BASIC25.7■■□□□ 1.7
CUEDC2Q9H467 NOX4-204ENST00000393282 560 ntTSL 1 (best) BASIC25.7■■□□□ 1.7
CUEDC2Q9H467 ENHO-201ENST00000399775 1082 ntAPPRIS P1 TSL 2 BASIC25.7■■□□□ 1.7
CUEDC2Q9H467 NRL-202ENST00000396997 1517 ntAPPRIS P1 TSL 1 (best) BASIC25.69■■□□□ 1.7
CUEDC2Q9H467 C7orf25-205ENST00000438029 1743 ntAPPRIS P1 TSL 2 BASIC25.69■■□□□ 1.7
CUEDC2Q9H467 CHST6-202ENST00000390664 2093 ntAPPRIS P1 TSL 1 (best) BASIC25.69■■□□□ 1.7
CUEDC2Q9H467 SNHG12-212ENST00000531126 719 ntTSL 1 (best) BASIC25.69■■□□□ 1.7
CUEDC2Q9H467 MCRIP1-210ENST00000576431 577 ntTSL 5 BASIC25.69■■□□□ 1.7
CUEDC2Q9H467 DVL1-201ENST00000378888 3239 ntAPPRIS ALT1 TSL 5 BASIC25.69■■□□□ 1.7
CUEDC2Q9H467 PLEKHB1-201ENST00000227214 2016 ntAPPRIS ALT1 TSL 1 (best) BASIC25.69■■□□□ 1.7
CUEDC2Q9H467 KCTD15-207ENST00000589786 1625 ntAPPRIS P1 TSL 2 BASIC25.69■■□□□ 1.7
CUEDC2Q9H467 KREMEN2-204ENST00000572045 2339 ntAPPRIS ALT2 TSL 1 (best) BASIC25.69■■□□□ 1.7
CUEDC2Q9H467 AF117829.1-207ENST00000504145 1572 ntTSL 3 BASIC25.69■■□□□ 1.7
CUEDC2Q9H467 PKIB-205ENST00000368452 1398 ntAPPRIS P1 TSL 1 (best) BASIC25.69■■□□□ 1.7
CUEDC2Q9H467 AK8-201ENST00000298545 2072 ntAPPRIS P1 TSL 1 (best) BASIC25.68■■□□□ 1.7
CUEDC2Q9H467 NPAS3-206ENST00000548645 2926 ntAPPRIS ALT2 TSL 1 (best) BASIC25.68■■□□□ 1.7
CUEDC2Q9H467 PEBP1-201ENST00000261313 1697 ntAPPRIS P1 TSL 1 (best) BASIC25.68■■□□□ 1.7
CUEDC2Q9H467 CDYL-203ENST00000397588 2184 ntAPPRIS P1 TSL 1 (best) BASIC25.68■■□□□ 1.7
CUEDC2Q9H467 MRPL23-202ENST00000381519 643 ntAPPRIS P1 TSL 3 BASIC25.68■■□□□ 1.7
CUEDC2Q9H467 MRPL23-205ENST00000397298 736 ntAPPRIS P1 TSL 1 (best) BASIC25.68■■□□□ 1.7
CUEDC2Q9H467 H2AFB1-201ENST00000620016 587 ntAPPRIS P1 BASIC25.68■■□□□ 1.7
CUEDC2Q9H467 EI24-213ENST00000618552 1747 ntTSL 5 BASIC25.68■■□□□ 1.7
CUEDC2Q9H467 KLHDC9-203ENST00000392192 1333 ntTSL 1 (best) BASIC25.67■■□□□ 1.7
CUEDC2Q9H467 EPM2A-209ENST00000638262 2679 ntTSL 1 (best) BASIC25.67■■□□□ 1.7
CUEDC2Q9H467 YBX1P4-201ENST00000392794 808 ntBASIC25.67■■□□□ 1.7
CUEDC2Q9H467 KRTAP5-5-201ENST00000399676 933 ntAPPRIS P1 BASIC25.67■■□□□ 1.7
CUEDC2Q9H467 CDKN2A-214ENST00000579755 1283 ntAPPRIS P1 TSL 1 (best) BASIC25.67■■□□□ 1.7
CUEDC2Q9H467 AL121906.1-201ENST00000606866 440 ntTSL 3 BASIC25.67■■□□□ 1.7
CUEDC2Q9H467 TTC39A-203ENST00000371747 1876 ntTSL 2 BASIC25.66■■□□□ 1.7
CUEDC2Q9H467 SNRNP70-206ENST00000598441 1574 ntAPPRIS P1 TSL 1 (best) BASIC25.66■■□□□ 1.7
CUEDC2Q9H467 AC064853.4-201ENST00000641394 363 ntAPPRIS P1 BASIC25.66■■□□□ 1.7
CUEDC2Q9H467 CCDC96-201ENST00000310085 2091 ntAPPRIS P1 BASIC25.66■■□□□ 1.7
CUEDC2Q9H467 PRSS56-201ENST00000449534 2157 ntAPPRIS ALT2 TSL 5 BASIC25.66■■□□□ 1.7
CUEDC2Q9H467 PRSS56-203ENST00000617714 2158 ntAPPRIS P2 TSL 5 BASIC25.66■■□□□ 1.7
CUEDC2Q9H467 PHF11-202ENST00000378319 1359 ntAPPRIS P3 TSL 1 (best) BASIC25.66■■□□□ 1.7
CUEDC2Q9H467 EVX1-201ENST00000222761 1500 ntTSL 1 (best) BASIC25.65■■□□□ 1.7
CUEDC2Q9H467 RBPMS-209ENST00000520161 842 ntTSL 2 BASIC25.65■■□□□ 1.7
CUEDC2Q9H467 ZFP91-CNTF-201ENST00000389919 2319 ntAPPRIS P5 TSL 2 BASIC25.65■■□□□ 1.7
CUEDC2Q9H467 GET4-201ENST00000265857 2090 ntAPPRIS P2 TSL 1 (best) BASIC25.65■■□□□ 1.7
CUEDC2Q9H467 TLX1-203ENST00000467928 1838 ntTSL 1 (best) BASIC25.65■■□□□ 1.7
CUEDC2Q9H467 RILP-201ENST00000301336 1771 ntAPPRIS P1 TSL 1 (best) BASIC25.64■■□□□ 1.7
CUEDC2Q9H467 GRK4-202ENST00000398051 2068 ntTSL 1 (best) BASIC25.64■■□□□ 1.7
CUEDC2Q9H467 RFLNA-202ENST00000338359 652 ntAPPRIS P2 TSL 1 (best) BASIC25.64■■□□□ 1.7
CUEDC2Q9H467 AC103724.3-201ENST00000564481 992 ntBASIC25.64■■□□□ 1.7
CUEDC2Q9H467 AC093390.2-201ENST00000638628 1007 ntTSL 5 BASIC25.64■■□□□ 1.7
CUEDC2Q9H467 FRMD8-203ENST00000416776 1818 ntTSL 2 BASIC25.64■■□□□ 1.7
CUEDC2Q9H467 MID1IP1-203ENST00000457894 1902 ntAPPRIS P1 TSL 3 BASIC25.64■■□□□ 1.69
CUEDC2Q9H467 TTLL11-202ENST00000373776 2012 ntTSL 1 (best) BASIC25.63■■□□□ 1.69
CUEDC2Q9H467 PRR35-201ENST00000409413 2216 ntAPPRIS P1 TSL 1 (best) BASIC25.63■■□□□ 1.69
CUEDC2Q9H467 FAM120C-203ENST00000477084 1140 ntAPPRIS ALT2 TSL 1 (best) BASIC25.63■■□□□ 1.69
CUEDC2Q9H467 HMGA2-206ENST00000536545 1788 ntTSL 1 (best) BASIC25.63■■□□□ 1.69
CUEDC2Q9H467 VSTM4-201ENST00000298454 2170 ntAPPRIS P3 TSL 2 BASIC25.63■■□□□ 1.69
CUEDC2Q9H467 CLEC14A-201ENST00000342213 2267 ntAPPRIS P1 BASIC25.63■■□□□ 1.69
CUEDC2Q9H467 CYP2A13-201ENST00000330436 1739 ntAPPRIS P1 TSL 1 (best) BASIC25.63■■□□□ 1.69
CUEDC2Q9H467 RAD21L1-202ENST00000402452 1707 ntTSL 5 BASIC25.63■■□□□ 1.69
CUEDC2Q9H467 CAMK2N1-201ENST00000375078 2336 ntAPPRIS P1 TSL 1 (best) BASIC25.62■■□□□ 1.69
CUEDC2Q9H467 IGFBP6-201ENST00000301464 1169 ntAPPRIS P2 TSL 1 (best) BASIC25.62■■□□□ 1.69
CUEDC2Q9H467 AC053527.1-201ENST00000502790 685 ntTSL 3 BASIC25.62■■□□□ 1.69
CUEDC2Q9H467 TARBP1-201ENST00000040877 5130 ntAPPRIS P1 TSL 1 (best) BASIC25.62■■□□□ 1.69
CUEDC2Q9H467 KRT8P33-201ENST00000508125 1423 ntBASIC25.62■■□□□ 1.69
CUEDC2Q9H467 TMED4-205ENST00000481238 1755 ntTSL 1 (best) BASIC25.61■■□□□ 1.69
CUEDC2Q9H467 GIT1-210ENST00000579937 2798 ntTSL 2 BASIC25.61■■□□□ 1.69
CUEDC2Q9H467 LINC01578-209ENST00000557682 2683 ntTSL 2 BASIC25.61■■□□□ 1.69
CUEDC2Q9H467 C19orf12-204ENST00000392276 1912 ntTSL 1 (best) BASIC25.61■■□□□ 1.69
CUEDC2Q9H467 P3H3-201ENST00000290510 2632 ntAPPRIS P1 TSL 1 (best) BASIC25.61■■□□□ 1.69
CUEDC2Q9H467 DCAF4-206ENST00000509153 1521 ntAPPRIS ALT2 TSL 2 BASIC25.61■■□□□ 1.69
CUEDC2Q9H467 CCDC92-209ENST00000545891 1790 ntAPPRIS P1 TSL 2 BASIC25.61■■□□□ 1.69
CUEDC2Q9H467 SNX10-207ENST00000446848 2613 ntAPPRIS P2 TSL 1 (best) BASIC25.61■■□□□ 1.69
CUEDC2Q9H467 ALDH1A3-203ENST00000557963 1670 ntBASIC25.61■■□□□ 1.69
CUEDC2Q9H467 DHH-201ENST00000266991 1936 ntAPPRIS P1 TSL 1 (best) BASIC25.61■■□□□ 1.69
CUEDC2Q9H467 DHRS11-215ENST00000618403 1598 ntAPPRIS P1 TSL 1 (best) BASIC25.61■■□□□ 1.69
CUEDC2Q9H467 ROR1-202ENST00000371080 2305 ntTSL 1 (best) BASIC25.6■■□□□ 1.69
CUEDC2Q9H467 IKBKG-211ENST00000615874 1460 ntTSL 5 BASIC25.6■■□□□ 1.69
CUEDC2Q9H467 IKBKG-215ENST00000619941 1463 ntTSL 5 BASIC25.6■■□□□ 1.69
CUEDC2Q9H467 LINC00092-201ENST00000412122 1726 ntTSL 1 (best) BASIC25.6■■□□□ 1.69
CUEDC2Q9H467 CCDC47-204ENST00000582252 1719 ntTSL 2 BASIC25.6■■□□□ 1.69
CUEDC2Q9H467 NIPSNAP2-201ENST00000322090 1999 ntAPPRIS P1 TSL 1 (best) BASIC25.6■■□□□ 1.69
CUEDC2Q9H467 PTH1R-207ENST00000449590 2123 ntAPPRIS P1 TSL 1 (best) BASIC25.6■■□□□ 1.69
CUEDC2Q9H467 BRI3-201ENST00000297290 780 ntAPPRIS P1 TSL 1 (best) BASIC25.6■■□□□ 1.69
CUEDC2Q9H467 LRRC1-201ENST00000370882 808 ntTSL 3 BASIC25.6■■□□□ 1.69
CUEDC2Q9H467 AL355490.1-201ENST00000445808 805 ntTSL 3 BASIC25.6■■□□□ 1.69
CUEDC2Q9H467 CAPN10-208ENST00000404753 2570 ntAPPRIS ALT2 TSL 5 BASIC25.6■■□□□ 1.69
CUEDC2Q9H467 PNCK-215ENST00000447676 1585 ntTSL 2 BASIC25.6■■□□□ 1.69
CUEDC2Q9H467 VPS53-211ENST00000571805 2356 ntTSL 1 (best) BASIC25.6■■□□□ 1.69
CUEDC2Q9H467 HES6-201ENST00000272937 1454 ntAPPRIS P3 TSL 1 (best) BASIC25.6■■□□□ 1.69
CUEDC2Q9H467 MADCAM1-206ENST00000617201 1491 ntAPPRIS ALT2 TSL 5 BASIC25.6■■□□□ 1.69
Retrieved 100 of 98,524 protein–RNA pairs in 26.1 ms