Protein–RNA interactions for Protein: Q9H1C7

CYSTM1, Cysteine-rich and transmembrane domain-containing protein 1, humanhuman

Predictions only

Length 97 aa.

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Protein RNA Prediction (catRAPID) Interaction (ENCODE eCLIP)
Gene UniProt Accession Transcript Symbol Ensembl Transcript ID Length Transcript Status Prediction Score Prediction z-Score p-Value Fold Change
CYSTM1Q9H1C7 HEY2-201ENST00000368364 2678 ntAPPRIS P1 TSL 1 (best) BASIC13.6□□□□□ -0.23
CYSTM1Q9H1C7 FMR1-208ENST00000440235 4271 ntTSL 1 (best) BASIC13.6□□□□□ -0.23
CYSTM1Q9H1C7 SLC12A5-210ENST00000616202 2445 ntTSL 1 (best) BASIC13.6□□□□□ -0.23
CYSTM1Q9H1C7 PITX2-201ENST00000306732 2320 ntAPPRIS P4 TSL 1 (best) BASIC13.6□□□□□ -0.23
CYSTM1Q9H1C7 FBXO41-204ENST00000520530 3293 ntAPPRIS P1 TSL 5 BASIC13.6□□□□□ -0.23
CYSTM1Q9H1C7 RBM38-203ENST00000356208 2382 ntAPPRIS P1 TSL 1 (best) BASIC13.6□□□□□ -0.23
CYSTM1Q9H1C7 SMOX-203ENST00000339123 2074 ntTSL 1 (best) BASIC13.6□□□□□ -0.23
CYSTM1Q9H1C7 C2CD4D-201ENST00000454109 1757 ntAPPRIS P1 TSL 2 BASIC13.6□□□□□ -0.23
CYSTM1Q9H1C7 FKBP8-213ENST00000608443 1849 ntAPPRIS P3 TSL 1 (best) BASIC13.6□□□□□ -0.23
CYSTM1Q9H1C7 ZBTB33-202ENST00000557385 2346 ntAPPRIS P1 TSL 1 (best) BASIC13.59□□□□□ -0.23
CYSTM1Q9H1C7 GABRA2-214ENST00000515082 2366 ntTSL 1 (best) BASIC13.59□□□□□ -0.23
CYSTM1Q9H1C7 GAL3ST1-204ENST00000402369 1712 ntAPPRIS P1 TSL 3 BASIC13.59□□□□□ -0.23
CYSTM1Q9H1C7 ZNF692-204ENST00000451251 2065 ntAPPRIS ALT2 TSL 2 BASIC13.59□□□□□ -0.23
CYSTM1Q9H1C7 HNRNPM-202ENST00000348943 2568 ntAPPRIS ALT2 TSL 1 (best) BASIC13.59□□□□□ -0.23
CYSTM1Q9H1C7 ZYG11B-202ENST00000545132 2294 ntTSL 2 BASIC13.59□□□□□ -0.23
CYSTM1Q9H1C7 SNN-201ENST00000329565 3312 ntAPPRIS P1 TSL 1 (best) BASIC13.59□□□□□ -0.23
CYSTM1Q9H1C7 KMT5B-203ENST00000401547 2666 ntTSL 1 (best) BASIC13.59□□□□□ -0.23
CYSTM1Q9H1C7 ASRGL1-201ENST00000301776 2182 ntAPPRIS P1 TSL 1 (best) BASIC13.59□□□□□ -0.23
CYSTM1Q9H1C7 DLGAP4-206ENST00000475894 3110 ntAPPRIS ALT2 TSL 2 BASIC13.59□□□□□ -0.23
CYSTM1Q9H1C7 SEPHS1-206ENST00000545675 2988 ntTSL 1 (best) BASIC13.59□□□□□ -0.23
CYSTM1Q9H1C7 P2RX4-203ENST00000359949 1836 ntTSL 5 BASIC13.58□□□□□ -0.24
CYSTM1Q9H1C7 GPR160-201ENST00000355897 2039 ntAPPRIS P1 TSL 1 (best) BASIC13.58□□□□□ -0.24
CYSTM1Q9H1C7 CDK11B-207ENST00000626918 2457 ntTSL 5 BASIC13.58□□□□□ -0.24
CYSTM1Q9H1C7 CDK11B-208ENST00000629289 2490 ntTSL 5 BASIC13.58□□□□□ -0.24
CYSTM1Q9H1C7 CDK11B-209ENST00000629312 2496 ntTSL 5 BASIC13.58□□□□□ -0.24
CYSTM1Q9H1C7 KMT5A-201ENST00000330479 3069 ntAPPRIS ALT2 TSL 1 (best) BASIC13.58□□□□□ -0.24
CYSTM1Q9H1C7 TBX2-201ENST00000240328 3339 ntAPPRIS P1 TSL 1 (best) BASIC13.58□□□□□ -0.24
CYSTM1Q9H1C7 STARD3-202ENST00000394250 1949 ntTSL 2 BASIC13.58□□□□□ -0.24
CYSTM1Q9H1C7 AL138752.2-201ENST00000540557 2591 ntAPPRIS P1 TSL 5 BASIC13.58□□□□□ -0.24
CYSTM1Q9H1C7 TSEN15-201ENST00000361641 1960 ntAPPRIS P1 TSL 1 (best) BASIC13.58□□□□□ -0.24
CYSTM1Q9H1C7 EEF1D-256ENST00000618139 2238 ntTSL 5 BASIC13.58□□□□□ -0.24
CYSTM1Q9H1C7 MAPK8IP1-201ENST00000241014 3050 ntAPPRIS P1 TSL 1 (best) BASIC13.58□□□□□ -0.24
CYSTM1Q9H1C7 PUF60-203ENST00000453551 1842 ntTSL 1 (best) BASIC13.57□□□□□ -0.24
CYSTM1Q9H1C7 FBXW5-201ENST00000325285 2274 ntAPPRIS P1 TSL 1 (best) BASIC13.57□□□□□ -0.24
CYSTM1Q9H1C7 SLCO3A1-201ENST00000318445 5115 ntAPPRIS P1 TSL 1 (best) BASIC13.57□□□□□ -0.24
CYSTM1Q9H1C7 NEURL4-201ENST00000315614 5182 ntAPPRIS ALT2 TSL 1 (best) BASIC13.57□□□□□ -0.24
CYSTM1Q9H1C7 SLC25A10-202ENST00000350690 1885 ntAPPRIS P1 TSL 1 (best) BASIC13.57□□□□□ -0.24
CYSTM1Q9H1C7 NRG2-203ENST00000340391 1944 ntTSL 5 BASIC13.57□□□□□ -0.24
CYSTM1Q9H1C7 MAPK1-202ENST00000398822 1487 ntAPPRIS P1 TSL 1 (best) BASIC13.57□□□□□ -0.24
CYSTM1Q9H1C7 SUMF1-201ENST00000272902 2159 ntAPPRIS P1 TSL 1 (best) BASIC13.57□□□□□ -0.24
CYSTM1Q9H1C7 PARP15-202ENST00000464300 2156 ntAPPRIS P1 TSL 1 (best) BASIC13.57□□□□□ -0.24
CYSTM1Q9H1C7 GTF2E2-201ENST00000355904 1762 ntAPPRIS P1 TSL 1 (best) BASIC13.57□□□□□ -0.24
CYSTM1Q9H1C7 ZNF696-201ENST00000330143 2795 ntAPPRIS P1 TSL 1 (best) BASIC13.57□□□□□ -0.24
CYSTM1Q9H1C7 FKBP1A-205ENST00000439640 1583 ntTSL 3 BASIC13.57□□□□□ -0.24
CYSTM1Q9H1C7 TSPAN10-203ENST00000574882 1837 ntAPPRIS P2 TSL 1 (best) BASIC13.57□□□□□ -0.24
CYSTM1Q9H1C7 RFLNA-201ENST00000324038 2148 ntAPPRIS P2 TSL 2 BASIC13.57□□□□□ -0.24
CYSTM1Q9H1C7 MEN1-204ENST00000377313 1871 ntAPPRIS P3 TSL 2 BASIC13.57□□□□□ -0.24
CYSTM1Q9H1C7 AL157384.1-201ENST00000445995 2473 ntBASIC13.56□□□□□ -0.24
CYSTM1Q9H1C7 FAM213B-201ENST00000378424 2765 ntAPPRIS ALT2 TSL 5 BASIC13.56□□□□□ -0.24
CYSTM1Q9H1C7 NPAS3-201ENST00000346562 5847 ntAPPRIS P3 TSL 1 (best) BASIC13.56□□□□□ -0.24
CYSTM1Q9H1C7 TMEM235-201ENST00000374946 2409 ntTSL 5 BASIC13.56□□□□□ -0.24
CYSTM1Q9H1C7 SRPK3-204ENST00000370108 1863 ntAPPRIS ALT2 TSL 5 BASIC13.56□□□□□ -0.24
CYSTM1Q9H1C7 ARFIP2-202ENST00000396777 1868 ntAPPRIS P1 TSL 2 BASIC13.56□□□□□ -0.24
CYSTM1Q9H1C7 FAM3C-201ENST00000359943 2508 ntAPPRIS P1 TSL 1 (best) BASIC13.56□□□□□ -0.24
CYSTM1Q9H1C7 MID2-201ENST00000262843 2876 ntTSL 1 (best) BASIC13.56□□□□□ -0.24
CYSTM1Q9H1C7 ENGASE-205ENST00000579016 2579 ntAPPRIS P1 TSL 1 (best) BASIC13.56□□□□□ -0.24
CYSTM1Q9H1C7 PDLIM3-212ENST00000620787 2352 ntTSL 4 BASIC13.56□□□□□ -0.24
CYSTM1Q9H1C7 ENTPD6-202ENST00000360031 2766 ntAPPRIS ALT2 TSL 1 (best) BASIC13.55□□□□□ -0.24
CYSTM1Q9H1C7 SLC35F3-201ENST00000366617 2762 ntAPPRIS ALT1 TSL 1 (best) BASIC13.55□□□□□ -0.24
CYSTM1Q9H1C7 PHLPP1-201ENST00000262719 6390 ntAPPRIS P1 TSL 1 (best) BASIC13.55□□□□□ -0.24
CYSTM1Q9H1C7 ANO8-201ENST00000159087 4152 ntAPPRIS P1 TSL 1 (best) BASIC13.55□□□□□ -0.24
CYSTM1Q9H1C7 GSPT1-203ENST00000439887 2509 ntAPPRIS ALT2 TSL 1 (best) BASIC13.55□□□□□ -0.24
CYSTM1Q9H1C7 CELF5-201ENST00000292672 1854 ntAPPRIS P1 TSL 1 (best) BASIC13.55□□□□□ -0.24
CYSTM1Q9H1C7 CLN6-201ENST00000249806 2243 ntAPPRIS P1 TSL 1 (best) BASIC13.55□□□□□ -0.24
CYSTM1Q9H1C7 GPR35-201ENST00000319838 2249 ntAPPRIS P3 TSL 2 BASIC13.55□□□□□ -0.24
CYSTM1Q9H1C7 COL4A3BP-201ENST00000261415 2262 ntTSL 1 (best) BASIC13.55□□□□□ -0.24
CYSTM1Q9H1C7 XKR6-201ENST00000297303 1550 ntTSL 1 (best) BASIC13.55□□□□□ -0.24
CYSTM1Q9H1C7 ACSS3-201ENST00000261206 2666 ntAPPRIS ALT1 TSL 1 (best) BASIC13.55□□□□□ -0.24
CYSTM1Q9H1C7 ANKRD16-203ENST00000380094 2738 ntAPPRIS P1 TSL 2 BASIC13.55□□□□□ -0.24
CYSTM1Q9H1C7 PODN-203ENST00000395871 2744 ntTSL 5 BASIC13.55□□□□□ -0.24
CYSTM1Q9H1C7 SYBU-201ENST00000276646 2870 ntAPPRIS ALT2 TSL 1 (best) BASIC13.55□□□□□ -0.24
CYSTM1Q9H1C7 CACNA1H-210ENST00000638323 8048 ntAPPRIS ALT2 TSL 5 BASIC13.55□□□□□ -0.24
CYSTM1Q9H1C7 GPR62-201ENST00000322241 2191 ntAPPRIS P1 BASIC13.55□□□□□ -0.24
CYSTM1Q9H1C7 TEAD2-210ENST00000601519 2167 ntAPPRIS ALT1 TSL 1 (best) BASIC13.55□□□□□ -0.24
CYSTM1Q9H1C7 TDRP-203ENST00000523656 2622 ntTSL 5 BASIC13.55□□□□□ -0.24
CYSTM1Q9H1C7 CRMP1-201ENST00000324989 3146 ntTSL 1 (best) BASIC13.55□□□□□ -0.24
CYSTM1Q9H1C7 PGP-201ENST00000333503 2727 ntAPPRIS P1 TSL 1 (best) BASIC13.55□□□□□ -0.24
CYSTM1Q9H1C7 RNF149-201ENST00000295317 2458 ntAPPRIS P1 TSL 1 (best) BASIC13.54□□□□□ -0.24
CYSTM1Q9H1C7 NPAS1-202ENST00000449844 2043 ntAPPRIS P1 TSL 1 (best) BASIC13.54□□□□□ -0.24
CYSTM1Q9H1C7 CTF1-202ENST00000395019 1617 ntAPPRIS ALT1 TSL 1 (best) BASIC13.54□□□□□ -0.24
CYSTM1Q9H1C7 SLC39A14-202ENST00000289952 2137 ntAPPRIS ALT2 TSL 2 BASIC13.54□□□□□ -0.24
CYSTM1Q9H1C7 MFSD7-201ENST00000322224 2123 ntAPPRIS P3 TSL 1 (best) BASIC13.54□□□□□ -0.24
CYSTM1Q9H1C7 PEX26-202ENST00000399744 1672 ntAPPRIS P1 TSL 1 (best) BASIC13.54□□□□□ -0.24
CYSTM1Q9H1C7 AP003733.4-201ENST00000623785 1697 ntBASIC13.54□□□□□ -0.24
CYSTM1Q9H1C7 FOLH1-203ENST00000343844 2258 ntTSL 2 BASIC13.54□□□□□ -0.24
CYSTM1Q9H1C7 FAM213B-205ENST00000444521 2827 ntAPPRIS ALT2 TSL 2 BASIC13.54□□□□□ -0.24
CYSTM1Q9H1C7 MOGS-201ENST00000233616 2895 ntAPPRIS P3 TSL 1 (best) BASIC13.54□□□□□ -0.24
CYSTM1Q9H1C7 LOXL1-AS1-210ENST00000567257 2358 ntTSL 2 BASIC13.54□□□□□ -0.24
CYSTM1Q9H1C7 IGFBP3-210ENST00000613132 2412 ntTSL 5 BASIC13.54□□□□□ -0.24
CYSTM1Q9H1C7 TMEM161A-202ENST00000450333 1930 ntTSL 2 BASIC13.54□□□□□ -0.24
CYSTM1Q9H1C7 SPOCK3-221ENST00000512648 1456 ntTSL 1 (best) BASIC13.54□□□□□ -0.24
CYSTM1Q9H1C7 JADE2-204ENST00000402835 2797 ntTSL 5 BASIC13.54□□□□□ -0.24
CYSTM1Q9H1C7 TCP11-202ENST00000311875 2166 ntAPPRIS ALT2 TSL 1 (best) BASIC13.54□□□□□ -0.24
CYSTM1Q9H1C7 AC141586.4-201ENST00000624558 1573 ntBASIC13.54□□□□□ -0.24
CYSTM1Q9H1C7 SLC22A17-202ENST00000354772 2238 ntAPPRIS ALT2 TSL 1 (best) BASIC13.54□□□□□ -0.24
CYSTM1Q9H1C7 HS3ST4-201ENST00000331351 3203 ntAPPRIS P1 TSL 1 (best) BASIC13.53□□□□□ -0.24
CYSTM1Q9H1C7 SLC9A3-203ENST00000514375 2504 ntAPPRIS ALT2 TSL 1 (best) BASIC13.53□□□□□ -0.24
CYSTM1Q9H1C7 LONRF3-202ENST00000371628 2550 ntAPPRIS P1 TSL 1 (best) BASIC13.53□□□□□ -0.24
CYSTM1Q9H1C7 SLC12A5-AS1-202ENST00000535913 1957 ntTSL 2 BASIC13.53□□□□□ -0.24
CYSTM1Q9H1C7 MLX-201ENST00000246912 2586 ntAPPRIS P3 TSL 1 (best) BASIC13.53□□□□□ -0.24
Retrieved 100 of 98,524 protein–RNA pairs in 27 ms