Protein–RNA interactions for Protein: Q9BYE3

LCE3D, Late cornified envelope protein 3D, humanhuman

Predictions only

Length 92 aa.

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Protein RNA Prediction (catRAPID) Interaction (ENCODE eCLIP)
Gene UniProt Accession Transcript Symbol Ensembl Transcript ID Length Transcript Status Prediction Score Prediction z-Score p-Value Fold Change
LCE3DQ9BYE3 CNTNAP3B-203ENST00000377561 5379 ntAPPRIS P2 TSL 1 (best) BASIC6.19□□□□□ -1.42
LCE3DQ9BYE3 MCTP1-218ENST00000515393 5396 ntAPPRIS P3 TSL 1 (best) BASIC6.19□□□□□ -1.42
LCE3DQ9BYE3 UPF3A-201ENST00000351487 2235 ntTSL 1 (best) BASIC6.19□□□□□ -1.42
LCE3DQ9BYE3 BSCL2-205ENST00000403550 1693 ntAPPRIS P3 TSL 5 BASIC6.19□□□□□ -1.42
LCE3DQ9BYE3 GDF7-201ENST00000272224 9749 ntAPPRIS P1 TSL 1 (best) BASIC6.19□□□□□ -1.42
LCE3DQ9BYE3 MYCN-201ENST00000281043 2602 ntAPPRIS P1 TSL 5 BASIC6.19□□□□□ -1.42
LCE3DQ9BYE3 GALC-202ENST00000393568 2054 ntTSL 2 BASIC6.19□□□□□ -1.42
LCE3DQ9BYE3 RP9P-201ENST00000381639 1303 ntTSL 1 (best) BASIC6.19□□□□□ -1.42
LCE3DQ9BYE3 SH2B1-205ENST00000538342 1532 ntTSL 2 BASIC6.19□□□□□ -1.42
LCE3DQ9BYE3 SKIDA1-201ENST00000444772 2667 ntAPPRIS ALT2 TSL 5 BASIC6.19□□□□□ -1.42
LCE3DQ9BYE3 ZBTB46-203ENST00000395104 5198 ntAPPRIS P1 TSL 2 BASIC6.19□□□□□ -1.42
LCE3DQ9BYE3 SHD-204ENST00000599689 1729 ntTSL 5 BASIC6.19□□□□□ -1.42
LCE3DQ9BYE3 PEX10-204ENST00000507596 1941 ntAPPRIS ALT1 TSL 5 BASIC6.19□□□□□ -1.42
LCE3DQ9BYE3 ZNRF1-202ENST00000335325 4620 ntAPPRIS P1 TSL 1 (best) BASIC6.19□□□□□ -1.42
LCE3DQ9BYE3 SLC9A3-203ENST00000514375 2504 ntAPPRIS ALT2 TSL 1 (best) BASIC6.19□□□□□ -1.42
LCE3DQ9BYE3 CAPNS1-216ENST00000628306 1389 ntTSL 5 BASIC6.18□□□□□ -1.42
LCE3DQ9BYE3 SOWAHD-201ENST00000343905 1552 ntAPPRIS P1 BASIC6.18□□□□□ -1.42
LCE3DQ9BYE3 MLST8-219ENST00000565250 1588 ntAPPRIS P3 TSL 3 BASIC6.18□□□□□ -1.42
LCE3DQ9BYE3 TSEN15-201ENST00000361641 1960 ntAPPRIS P1 TSL 1 (best) BASIC6.18□□□□□ -1.42
LCE3DQ9BYE3 SMARCC1-201ENST00000254480 6375 ntAPPRIS P1 TSL 1 (best) BASIC6.18□□□□□ -1.42
LCE3DQ9BYE3 FRRS1L-201ENST00000561981 8197 ntAPPRIS P1 TSL 1 (best) BASIC6.18□□□□□ -1.42
LCE3DQ9BYE3 SRP68-201ENST00000307877 2649 ntAPPRIS P1 TSL 1 (best) BASIC6.18□□□□□ -1.42
LCE3DQ9BYE3 KLC1-227ENST00000634686 2229 ntTSL 5 BASIC6.18□□□□□ -1.42
LCE3DQ9BYE3 ARHGAP29-202ENST00000370217 2043 ntTSL 1 (best) BASIC6.18□□□□□ -1.42
LCE3DQ9BYE3 BDH1-207ENST00000441275 1605 ntTSL 5 BASIC6.18□□□□□ -1.42
LCE3DQ9BYE3 RABEP2-203ENST00000544477 1645 ntTSL 2 BASIC6.18□□□□□ -1.42
LCE3DQ9BYE3 NCK2-201ENST00000233154 2683 ntAPPRIS P1 TSL 5 BASIC6.18□□□□□ -1.42
LCE3DQ9BYE3 STK25-234ENST00000535007 2459 ntTSL 2 BASIC6.18□□□□□ -1.42
LCE3DQ9BYE3 AMZ2P1-201ENST00000397713 2259 ntTSL 1 (best) BASIC6.18□□□□□ -1.42
LCE3DQ9BYE3 MTSS1L-201ENST00000338779 4992 ntAPPRIS P2 TSL 1 (best) BASIC6.18□□□□□ -1.42
LCE3DQ9BYE3 AIRN-201ENST00000601203 4374 ntBASIC6.18□□□□□ -1.42
LCE3DQ9BYE3 TMEM259-202ENST00000356663 2748 ntAPPRIS ALT2 TSL 1 (best) BASIC6.18□□□□□ -1.42
LCE3DQ9BYE3 TPRN-202ENST00000409012 2718 ntAPPRIS P2 TSL 1 (best) BASIC6.18□□□□□ -1.42
LCE3DQ9BYE3 NRG2-201ENST00000289409 2535 ntAPPRIS ALT2 TSL 5 BASIC6.18□□□□□ -1.42
LCE3DQ9BYE3 MRPL4-201ENST00000253099 1455 ntAPPRIS P2 TSL 1 (best) BASIC6.18□□□□□ -1.42
LCE3DQ9BYE3 LINC00565-201ENST00000562710 2331 ntBASIC6.18□□□□□ -1.42
LCE3DQ9BYE3 AC010907.1-201ENST00000441632 807 ntTSL 3 BASIC6.18□□□□□ -1.42
LCE3DQ9BYE3 NADK2-210ENST00000514504 1233 ntTSL 5 BASIC6.18□□□□□ -1.42
LCE3DQ9BYE3 GNAL-201ENST00000269162 1722 ntAPPRIS P1 TSL 2 BASIC6.18□□□□□ -1.42
LCE3DQ9BYE3 RAD21L1-202ENST00000402452 1707 ntTSL 5 BASIC6.18□□□□□ -1.42
LCE3DQ9BYE3 FBXL6-202ENST00000455319 1727 ntAPPRIS ALT2 TSL 1 (best) BASIC6.18□□□□□ -1.42
LCE3DQ9BYE3 ATP13A2-215ENST00000617114 1723 ntTSL 5 BASIC6.18□□□□□ -1.42
LCE3DQ9BYE3 ELL3-201ENST00000319359 2352 ntAPPRIS P1 TSL 1 (best) BASIC6.18□□□□□ -1.42
LCE3DQ9BYE3 SH2B3-201ENST00000341259 5406 ntAPPRIS P1 TSL 1 (best) BASIC6.18□□□□□ -1.42
LCE3DQ9BYE3 PGR-AS1-202ENST00000632820 1545 ntTSL 1 (best) BASIC6.18□□□□□ -1.42
LCE3DQ9BYE3 CDK13-202ENST00000340829 5066 ntAPPRIS ALT1 TSL 1 (best) BASIC6.18□□□□□ -1.42
LCE3DQ9BYE3 C15orf59-201ENST00000379822 1342 ntAPPRIS P1 TSL 1 (best) BASIC6.18□□□□□ -1.42
LCE3DQ9BYE3 TRIM3-201ENST00000345851 2879 ntAPPRIS P1 TSL 1 (best) BASIC6.18□□□□□ -1.42
LCE3DQ9BYE3 ABHD13-201ENST00000375898 5338 ntAPPRIS P1 TSL 1 (best) BASIC6.18□□□□□ -1.42
LCE3DQ9BYE3 CDH23-206ENST00000398842 1759 ntTSL 5 BASIC6.18□□□□□ -1.42
LCE3DQ9BYE3 FBXO41-205ENST00000521871 7336 ntAPPRIS P1 TSL 5 BASIC6.18□□□□□ -1.42
LCE3DQ9BYE3 PKM-201ENST00000319622 2717 ntAPPRIS P5 TSL 2 BASIC6.18□□□□□ -1.42
LCE3DQ9BYE3 SHC3-202ENST00000375835 9768 ntAPPRIS P1 TSL 1 (best) BASIC6.18□□□□□ -1.42
LCE3DQ9BYE3 AC098864.1-205ENST00000315302 2260 ntTSL 2 BASIC6.18□□□□□ -1.42
LCE3DQ9BYE3 TANGO2-201ENST00000327374 2273 ntAPPRIS P1 TSL 1 (best) BASIC6.18□□□□□ -1.42
LCE3DQ9BYE3 SMARCD2-201ENST00000225742 1800 ntTSL 1 (best) BASIC6.18□□□□□ -1.42
LCE3DQ9BYE3 NFATC2IP-201ENST00000320805 4569 ntAPPRIS P1 TSL 1 (best) BASIC6.18□□□□□ -1.42
LCE3DQ9BYE3 TERF2-201ENST00000254942 2983 ntAPPRIS P1 TSL 1 (best) BASIC6.18□□□□□ -1.42
LCE3DQ9BYE3 ADARB1-201ENST00000348831 6882 ntAPPRIS P1 TSL 1 (best) BASIC6.18□□□□□ -1.42
LCE3DQ9BYE3 PCDHA2-203ENST00000526136 5254 ntAPPRIS P2 TSL 1 (best) BASIC6.18□□□□□ -1.42
LCE3DQ9BYE3 ASF1B-201ENST00000263382 2059 ntAPPRIS P1 TSL 1 (best) BASIC6.18□□□□□ -1.42
LCE3DQ9BYE3 REPIN1-214ENST00000489432 2058 ntAPPRIS ALT2 TSL 2 BASIC6.18□□□□□ -1.42
LCE3DQ9BYE3 RANBP10-201ENST00000317506 5341 ntAPPRIS P2 TSL 1 (best) BASIC6.18□□□□□ -1.42
LCE3DQ9BYE3 RANBP10-209ENST00000630626 5305 ntAPPRIS ALT2 TSL 5 BASIC6.18□□□□□ -1.42
LCE3DQ9BYE3 C21orf2-203ENST00000397956 1634 ntAPPRIS ALT2 TSL 1 (best) BASIC6.17□□□□□ -1.42
LCE3DQ9BYE3 EMC10-206ENST00000598585 1610 ntAPPRIS ALT2 TSL 5 BASIC6.17□□□□□ -1.42
LCE3DQ9BYE3 UBTF-213ENST00000533177 3011 ntTSL 5 BASIC6.17□□□□□ -1.42
LCE3DQ9BYE3 SRPK3-204ENST00000370108 1863 ntAPPRIS ALT2 TSL 5 BASIC6.17□□□□□ -1.42
LCE3DQ9BYE3 ARFIP2-202ENST00000396777 1868 ntAPPRIS P1 TSL 2 BASIC6.17□□□□□ -1.42
LCE3DQ9BYE3 PCDH1-204ENST00000503492 2373 ntTSL 5 BASIC6.17□□□□□ -1.42
LCE3DQ9BYE3 WNT11-201ENST00000322563 1930 ntAPPRIS P1 TSL 1 (best) BASIC6.17□□□□□ -1.42
LCE3DQ9BYE3 ZAR1-201ENST00000327939 1460 ntAPPRIS P1 TSL 1 (best) BASIC6.17□□□□□ -1.42
LCE3DQ9BYE3 C6orf136-201ENST00000293604 1978 ntTSL 1 (best) BASIC6.17□□□□□ -1.42
LCE3DQ9BYE3 ARRDC1-AS1-203ENST00000623970 2210 ntTSL 5 BASIC6.17□□□□□ -1.42
LCE3DQ9BYE3 WDR86-201ENST00000334493 2023 ntAPPRIS P1 TSL 5 BASIC6.17□□□□□ -1.42
LCE3DQ9BYE3 AQP10-201ENST00000324978 1791 ntAPPRIS P1 TSL 1 (best) BASIC6.17□□□□□ -1.42
LCE3DQ9BYE3 LRRC75B-201ENST00000318753 1238 ntAPPRIS P1 TSL 1 (best) BASIC6.17□□□□□ -1.42
LCE3DQ9BYE3 TMEM147-202ENST00000392204 935 ntTSL 2 BASIC6.17□□□□□ -1.42
LCE3DQ9BYE3 CIB2-204ENST00000557846 934 ntTSL 3 BASIC6.17□□□□□ -1.42
LCE3DQ9BYE3 AC097358.2-201ENST00000607541 1159 ntBASIC6.17□□□□□ -1.42
LCE3DQ9BYE3 CARM1-201ENST00000327064 3330 ntAPPRIS P2 TSL 1 (best) BASIC6.17□□□□□ -1.42
LCE3DQ9BYE3 KCTD8-201ENST00000360029 2587 ntAPPRIS P1 TSL 1 (best) BASIC6.17□□□□□ -1.42
LCE3DQ9BYE3 HCG11-201ENST00000411553 5696 ntBASIC6.17□□□□□ -1.42
LCE3DQ9BYE3 DAG1-221ENST00000541308 5676 ntAPPRIS P1 TSL 5 BASIC6.17□□□□□ -1.42
LCE3DQ9BYE3 NOM1-201ENST00000275820 6077 ntAPPRIS P1 TSL 1 (best) BASIC6.17□□□□□ -1.42
LCE3DQ9BYE3 ARHGAP26-201ENST00000274498 6862 ntAPPRIS P3 TSL 1 (best) BASIC6.17□□□□□ -1.42
LCE3DQ9BYE3 FAM171A2-201ENST00000293443 3160 ntAPPRIS P1 TSL 1 (best) BASIC6.17□□□□□ -1.42
LCE3DQ9BYE3 WRNIP1-204ENST00000380773 2670 ntAPPRIS P1 TSL 1 (best) BASIC6.17□□□□□ -1.42
LCE3DQ9BYE3 AC004980.1-201ENST00000418663 2667 ntTSL 1 (best) BASIC6.17□□□□□ -1.42
LCE3DQ9BYE3 EP400NL-214ENST00000641289 2402 ntBASIC6.17□□□□□ -1.42
LCE3DQ9BYE3 SH3GLB2-203ENST00000372564 2982 ntAPPRIS P1 TSL 1 (best) BASIC6.17□□□□□ -1.42
LCE3DQ9BYE3 CEND1-201ENST00000330106 1649 ntAPPRIS P1 TSL 1 (best) BASIC6.17□□□□□ -1.42
LCE3DQ9BYE3 RABEP2-201ENST00000357573 2175 ntTSL 1 (best) BASIC6.17□□□□□ -1.42
LCE3DQ9BYE3 C8orf82-202ENST00000524821 2476 ntAPPRIS P2 TSL 1 (best) BASIC6.17□□□□□ -1.42
LCE3DQ9BYE3 DOCK9-206ENST00000427887 4176 ntTSL 1 (best) BASIC6.17□□□□□ -1.42
LCE3DQ9BYE3 SLC22A17-201ENST00000206544 2284 ntAPPRIS P4 TSL 1 (best) BASIC6.16□□□□□ -1.42
LCE3DQ9BYE3 SLC25A23-203ENST00000334510 1424 ntTSL 1 (best) BASIC6.16□□□□□ -1.42
LCE3DQ9BYE3 SMOX-203ENST00000339123 2074 ntTSL 1 (best) BASIC6.16□□□□□ -1.42
LCE3DQ9BYE3 MATK-203ENST00000395045 2073 ntAPPRIS P4 TSL 2 BASIC6.16□□□□□ -1.42
LCE3DQ9BYE3 PCK2-201ENST00000216780 2357 ntAPPRIS P1 TSL 1 (best) BASIC6.16□□□□□ -1.42
Retrieved 100 of 98,524 protein–RNA pairs in 15.5 ms