Protein–RNA interactions for Protein: Q96P44

COL21A1, Collagen alpha-1(XXI) chain, humanhuman

Predictions only

Length 957 aa.

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Protein RNA Prediction (catRAPID) Interaction (ENCODE eCLIP)
Gene UniProt Accession Transcript Symbol Ensembl Transcript ID Length Transcript Status Prediction Score Prediction z-Score p-Value Fold Change
COL21A1Q96P44 CCDC96-201ENST00000310085 2091 ntAPPRIS P1 BASIC21.66■■□□□ 1.06
COL21A1Q96P44 C18orf65-201ENST00000622985 2076 ntTSL 2 BASIC21.66■■□□□ 1.06
COL21A1Q96P44 PPP2R2C-203ENST00000382599 1807 ntAPPRIS P1 TSL 1 (best) BASIC21.66■■□□□ 1.06
COL21A1Q96P44 PDSS1-201ENST00000376215 1626 ntAPPRIS P1 TSL 1 (best) BASIC21.66■■□□□ 1.06
COL21A1Q96P44 KRT72-203ENST00000537672 1813 ntAPPRIS P1 TSL 2 BASIC21.65■■□□□ 1.06
COL21A1Q96P44 ARL4D-201ENST00000320033 1612 ntAPPRIS P1 TSL 1 (best) BASIC21.65■■□□□ 1.06
COL21A1Q96P44 HOXB3-202ENST00000460160 1525 ntTSL 5 BASIC21.65■■□□□ 1.06
COL21A1Q96P44 TMUB1-203ENST00000462940 1549 ntAPPRIS P1 TSL 1 (best) BASIC21.65■■□□□ 1.06
COL21A1Q96P44 AMZ2P1-201ENST00000397713 2259 ntTSL 1 (best) BASIC21.64■■□□□ 1.06
COL21A1Q96P44 TMSB15B-202ENST00000436583 2186 ntAPPRIS P1 TSL 1 (best) BASIC21.64■■□□□ 1.06
COL21A1Q96P44 CTSF-201ENST00000310325 2035 ntAPPRIS P1 TSL 1 (best) BASIC21.64■■□□□ 1.05
COL21A1Q96P44 SDHAF1-201ENST00000378887 1117 ntAPPRIS P1 BASIC21.64■■□□□ 1.05
COL21A1Q96P44 FAM120C-203ENST00000477084 1140 ntAPPRIS ALT2 TSL 1 (best) BASIC21.64■■□□□ 1.05
COL21A1Q96P44 RAX-201ENST00000256852 2935 ntTSL 1 (best) BASIC21.64■■□□□ 1.05
COL21A1Q96P44 FUT11-201ENST00000372841 2056 ntAPPRIS P1 TSL 1 (best) BASIC21.64■■□□□ 1.05
COL21A1Q96P44 TRAP1-202ENST00000538171 2052 ntTSL 2 BASIC21.64■■□□□ 1.05
COL21A1Q96P44 C1QL2-201ENST00000272520 2043 ntAPPRIS P1 TSL 1 (best) BASIC21.63■■□□□ 1.05
COL21A1Q96P44 SIAH2-201ENST00000312960 2517 ntAPPRIS P1 TSL 1 (best) BASIC21.63■■□□□ 1.05
COL21A1Q96P44 FAM162B-201ENST00000368557 1036 ntAPPRIS P1 TSL 1 (best) BASIC21.63■■□□□ 1.05
COL21A1Q96P44 SSSCA1-AS1-201ENST00000567594 614 ntBASIC21.63■■□□□ 1.05
COL21A1Q96P44 TSPAN10-204ENST00000611590 1068 ntAPPRIS ALT2 TSL 1 (best) BASIC21.63■■□□□ 1.05
COL21A1Q96P44 FAHD1-204ENST00000615972 757 ntTSL 5 BASIC21.63■■□□□ 1.05
COL21A1Q96P44 ADSSL1-202ENST00000332972 1969 ntTSL 1 (best) BASIC21.63■■□□□ 1.05
COL21A1Q96P44 DGAT2-201ENST00000228027 2453 ntAPPRIS P1 TSL 1 (best) BASIC21.63■■□□□ 1.05
COL21A1Q96P44 RBM33-201ENST00000287912 1404 ntTSL 2 BASIC21.63■■□□□ 1.05
COL21A1Q96P44 DENND5A-201ENST00000328194 5031 ntAPPRIS P1 TSL 1 (best) BASIC21.63■■□□□ 1.05
COL21A1Q96P44 CACTIN-AS1-201ENST00000592274 1913 ntTSL 2 BASIC21.63■■□□□ 1.05
COL21A1Q96P44 TMEM260-202ENST00000538838 1638 ntTSL 1 (best) BASIC21.62■■□□□ 1.05
COL21A1Q96P44 PRMT5-213ENST00000553897 1857 ntTSL 2 BASIC21.62■■□□□ 1.05
COL21A1Q96P44 TMEM64-203ENST00000458549 4997 ntAPPRIS P1 TSL 1 (best) BASIC21.62■■□□□ 1.05
COL21A1Q96P44 FHL2-203ENST00000358129 1578 ntTSL 5 BASIC21.62■■□□□ 1.05
COL21A1Q96P44 CITED4-201ENST00000372638 1316 ntAPPRIS P1 BASIC21.62■■□□□ 1.05
COL21A1Q96P44 TMEM238-201ENST00000444469 1000 ntAPPRIS P1 TSL 1 (best) BASIC21.62■■□□□ 1.05
COL21A1Q96P44 AC053527.1-201ENST00000502790 685 ntTSL 3 BASIC21.62■■□□□ 1.05
COL21A1Q96P44 CLEC2L-201ENST00000422142 1359 ntAPPRIS P2 TSL 3 BASIC21.61■■□□□ 1.05
COL21A1Q96P44 POLE2-201ENST00000216367 1776 ntAPPRIS P1 TSL 1 (best) BASIC21.61■■□□□ 1.05
COL21A1Q96P44 NAGLU-201ENST00000225927 2544 ntAPPRIS P1 TSL 1 (best) BASIC21.61■■□□□ 1.05
COL21A1Q96P44 R3HCC1-202ENST00000411463 1467 ntAPPRIS P5 TSL 5 BASIC21.61■■□□□ 1.05
COL21A1Q96P44 RARRES2P1-201ENST00000474487 481 ntBASIC21.61■■□□□ 1.05
COL21A1Q96P44 TMPO-AS1-201ENST00000546421 738 ntTSL 5 BASIC21.61■■□□□ 1.05
COL21A1Q96P44 AC010913.1-201ENST00000608612 420 ntTSL 2 BASIC21.61■■□□□ 1.05
COL21A1Q96P44 AL137002.2-201ENST00000639766 2238 ntTSL 5 BASIC21.61■■□□□ 1.05
COL21A1Q96P44 ABCB10P4-201ENST00000566803 2184 ntBASIC21.61■■□□□ 1.05
COL21A1Q96P44 DLK2-202ENST00000372485 1572 ntAPPRIS ALT1 TSL 5 BASIC21.61■■□□□ 1.05
COL21A1Q96P44 PTRH1-205ENST00000423807 1570 ntTSL 2 BASIC21.61■■□□□ 1.05
COL21A1Q96P44 SNX18-201ENST00000326277 2063 ntTSL 2 BASIC21.6■■□□□ 1.05
COL21A1Q96P44 LSR-201ENST00000347609 1880 ntAPPRIS ALT2 TSL 1 (best) BASIC21.6■■□□□ 1.05
COL21A1Q96P44 LSR-213ENST00000605618 1885 ntAPPRIS ALT2 TSL 1 (best) BASIC21.6■■□□□ 1.05
COL21A1Q96P44 SDF4-202ENST00000360001 1956 ntAPPRIS ALT2 TSL 1 (best) BASIC21.6■■□□□ 1.05
COL21A1Q96P44 IGFBP6-201ENST00000301464 1169 ntAPPRIS P2 TSL 1 (best) BASIC21.6■■□□□ 1.05
COL21A1Q96P44 HSF1-201ENST00000400780 2105 ntTSL 5 BASIC21.6■■□□□ 1.05
COL21A1Q96P44 SSX2IP-203ENST00000437941 5843 ntTSL 2 BASIC21.6■■□□□ 1.05
COL21A1Q96P44 CLEC14A-201ENST00000342213 2267 ntAPPRIS P1 BASIC21.6■■□□□ 1.05
COL21A1Q96P44 MAP2K2-201ENST00000262948 1734 ntAPPRIS P1 TSL 1 (best) BASIC21.6■■□□□ 1.05
COL21A1Q96P44 SAMD4B-208ENST00000598913 2877 ntAPPRIS ALT1 TSL 1 (best) BASIC21.59■■□□□ 1.05
COL21A1Q96P44 TSEN54-201ENST00000333213 1944 ntAPPRIS P1 TSL 1 (best) BASIC21.59■■□□□ 1.05
COL21A1Q96P44 IQCJ-SCHIP1-201ENST00000412423 2067 ntAPPRIS ALT2 TSL 1 (best) BASIC21.59■■□□□ 1.05
COL21A1Q96P44 DTNB-201ENST00000288642 2464 ntAPPRIS ALT2 TSL 2 BASIC21.59■■□□□ 1.05
COL21A1Q96P44 DTNB-208ENST00000406818 2474 ntAPPRIS P4 TSL 1 (best) BASIC21.59■■□□□ 1.05
COL21A1Q96P44 AC078883.1-201ENST00000442417 950 ntTSL 3 BASIC21.59■■□□□ 1.05
COL21A1Q96P44 TCEA1-211ENST00000522635 1432 ntTSL 2 BASIC21.59■■□□□ 1.05
COL21A1Q96P44 PTRH1-208ENST00000543175 814 ntAPPRIS P1 TSL 1 (best) BASIC21.59■■□□□ 1.05
COL21A1Q96P44 SHD-204ENST00000599689 1729 ntTSL 5 BASIC21.59■■□□□ 1.05
COL21A1Q96P44 CEBPB-AS1-201ENST00000613921 2648 ntTSL 3 BASIC21.59■■□□□ 1.05
COL21A1Q96P44 ATP13A2-215ENST00000617114 1723 ntTSL 5 BASIC21.59■■□□□ 1.05
COL21A1Q96P44 TRIM28-202ENST00000341753 2709 ntTSL 1 (best) BASIC21.59■■□□□ 1.05
COL21A1Q96P44 ZNF444-211ENST00000592949 1906 ntAPPRIS ALT2 TSL 1 (best) BASIC21.59■■□□□ 1.05
COL21A1Q96P44 ZSCAN18-212ENST00000600404 1934 ntAPPRIS ALT2 TSL 2 BASIC21.59■■□□□ 1.05
COL21A1Q96P44 CPNE2-202ENST00000535318 2316 ntAPPRIS P1 TSL 1 (best) BASIC21.58■■□□□ 1.05
COL21A1Q96P44 KLHDC9-203ENST00000392192 1333 ntTSL 1 (best) BASIC21.58■■□□□ 1.05
COL21A1Q96P44 PPP1CC-206ENST00000550991 1882 ntTSL 2 BASIC21.58■■□□□ 1.05
COL21A1Q96P44 MAL2-204ENST00000614891 2818 ntAPPRIS P1 TSL 1 (best) BASIC21.58■■□□□ 1.05
COL21A1Q96P44 ERF-201ENST00000222329 2698 ntAPPRIS P1 TSL 1 (best) BASIC21.58■■□□□ 1.05
COL21A1Q96P44 HOMER2-201ENST00000304231 1990 ntAPPRIS P4 TSL 5 BASIC21.58■■□□□ 1.05
COL21A1Q96P44 MRPL4-207ENST00000590669 1423 ntTSL 1 (best) BASIC21.58■■□□□ 1.05
COL21A1Q96P44 KRT18P24-201ENST00000344739 1156 ntBASIC21.58■■□□□ 1.05
COL21A1Q96P44 NDUFA10-204ENST00000407129 699 ntTSL 1 (best) BASIC21.58■■□□□ 1.05
COL21A1Q96P44 AL355490.1-201ENST00000445808 805 ntTSL 3 BASIC21.58■■□□□ 1.05
COL21A1Q96P44 AC103724.3-201ENST00000564481 992 ntBASIC21.58■■□□□ 1.05
COL21A1Q96P44 MMP25-AS1-209ENST00000576250 779 ntTSL 5 BASIC21.58■■□□□ 1.05
COL21A1Q96P44 AC011551.1-201ENST00000614101 683 ntBASIC21.58■■□□□ 1.05
COL21A1Q96P44 CNTFR-201ENST00000351266 1910 ntAPPRIS P1 TSL 1 (best) BASIC21.58■■□□□ 1.04
COL21A1Q96P44 AC079834.2-201ENST00000609776 1949 ntBASIC21.58■■□□□ 1.04
COL21A1Q96P44 CDC14B-202ENST00000375241 5589 ntAPPRIS P2 TSL 1 (best) BASIC21.58■■□□□ 1.04
COL21A1Q96P44 MYBL1-204ENST00000522677 5192 ntAPPRIS P1 TSL 1 (best) BASIC21.58■■□□□ 1.04
COL21A1Q96P44 NKX2-3-202ENST00000622383 1986 ntTSL 5 BASIC21.57■■□□□ 1.04
COL21A1Q96P44 MADCAM1-202ENST00000346144 1309 ntAPPRIS ALT2 TSL 1 (best) BASIC21.57■■□□□ 1.04
COL21A1Q96P44 GRAMD1A-201ENST00000317991 2695 ntAPPRIS P3 TSL 1 (best) BASIC21.57■■□□□ 1.04
COL21A1Q96P44 CEBPD-201ENST00000408965 2178 ntAPPRIS P1 BASIC21.57■■□□□ 1.04
COL21A1Q96P44 RNF223-201ENST00000453464 1902 ntAPPRIS P1 TSL 2 BASIC21.57■■□□□ 1.04
COL21A1Q96P44 MOB4-204ENST00000409360 1447 ntTSL 5 BASIC21.57■■□□□ 1.04
COL21A1Q96P44 THA1P-201ENST00000590384 1145 ntBASIC21.57■■□□□ 1.04
COL21A1Q96P44 C1orf232-201ENST00000634842 643 ntAPPRIS P5 TSL 5 BASIC21.57■■□□□ 1.04
COL21A1Q96P44 AC064853.4-201ENST00000641394 363 ntAPPRIS P1 BASIC21.57■■□□□ 1.04
COL21A1Q96P44 SUGCT-201ENST00000335693 1645 ntAPPRIS ALT2 TSL 1 (best) BASIC21.57■■□□□ 1.04
COL21A1Q96P44 ZFP91-CNTF-201ENST00000389919 2319 ntAPPRIS P5 TSL 2 BASIC21.57■■□□□ 1.04
COL21A1Q96P44 AC090877.2-201ENST00000558441 1738 ntBASIC21.57■■□□□ 1.04
COL21A1Q96P44 HOXD9-201ENST00000249499 1870 ntAPPRIS P1 TSL 1 (best) BASIC21.56■■□□□ 1.04
COL21A1Q96P44 CKB-201ENST00000348956 1709 ntAPPRIS P1 TSL 1 (best) BASIC21.56■■□□□ 1.04
COL21A1Q96P44 C3orf80-201ENST00000326474 2718 ntAPPRIS P1 BASIC21.56■■□□□ 1.04
Retrieved 100 of 98,524 protein–RNA pairs in 25.9 ms