Protein–RNA interactions for Protein: Q3C1V0

MS4A18, Membrane-spanning 4-domains subfamily A member 18, humanhuman

Predictions only

Length 323 aa.

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Protein RNA Prediction (catRAPID) Interaction (ENCODE eCLIP)
Gene UniProt Accession Transcript Symbol Ensembl Transcript ID Length Transcript Status Prediction Score Prediction z-Score p-Value Fold Change
MS4A18Q3C1V0 PTRH1-208ENST00000543175 814 ntAPPRIS P1 TSL 1 (best) BASIC20.59■□□□□ 0.89
MS4A18Q3C1V0 MCRIP1-210ENST00000576431 577 ntTSL 5 BASIC20.59■□□□□ 0.89
MS4A18Q3C1V0 ADSSL1-201ENST00000330877 1766 ntAPPRIS P1 TSL 1 (best) BASIC20.59■□□□□ 0.89
MS4A18Q3C1V0 SNRNP70-206ENST00000598441 1574 ntAPPRIS P1 TSL 1 (best) BASIC20.59■□□□□ 0.89
MS4A18Q3C1V0 HOXD9-201ENST00000249499 1870 ntAPPRIS P1 TSL 1 (best) BASIC20.58■□□□□ 0.89
MS4A18Q3C1V0 KCNIP1-203ENST00000390656 2249 ntTSL 5 BASIC20.58■□□□□ 0.89
MS4A18Q3C1V0 RUNDC3A-202ENST00000426726 2048 ntAPPRIS P1 TSL 1 (best) BASIC20.58■□□□□ 0.89
MS4A18Q3C1V0 USF2-201ENST00000222305 1634 ntAPPRIS P1 TSL 1 (best) BASIC20.58■□□□□ 0.89
MS4A18Q3C1V0 MPP5-205ENST00000556345 1163 ntTSL 2 BASIC20.58■□□□□ 0.89
MS4A18Q3C1V0 ATP5A1-220ENST00000593152 2258 ntTSL 2 BASIC20.58■□□□□ 0.88
MS4A18Q3C1V0 SNX18-201ENST00000326277 2063 ntTSL 2 BASIC20.58■□□□□ 0.88
MS4A18Q3C1V0 TMSB15B-202ENST00000436583 2186 ntAPPRIS P1 TSL 1 (best) BASIC20.57■□□□□ 0.88
MS4A18Q3C1V0 KMT2E-AS1-201ENST00000453677 736 ntTSL 3 BASIC20.57■□□□□ 0.88
MS4A18Q3C1V0 PON2-217ENST00000633192 1876 ntTSL 1 (best) BASIC20.57■□□□□ 0.88
MS4A18Q3C1V0 SMARCB1-201ENST00000263121 1690 ntAPPRIS P3 TSL 1 (best) BASIC20.57■□□□□ 0.88
MS4A18Q3C1V0 LIMD2-205ENST00000578402 1534 ntAPPRIS P1 TSL 1 (best) BASIC20.57■□□□□ 0.88
MS4A18Q3C1V0 NAGLU-201ENST00000225927 2544 ntAPPRIS P1 TSL 1 (best) BASIC20.57■□□□□ 0.88
MS4A18Q3C1V0 DHRS11-215ENST00000618403 1598 ntAPPRIS P1 TSL 1 (best) BASIC20.56■□□□□ 0.88
MS4A18Q3C1V0 TK2-216ENST00000564917 1156 ntTSL 3 BASIC20.56■□□□□ 0.88
MS4A18Q3C1V0 FAHD1-204ENST00000615972 757 ntTSL 5 BASIC20.56■□□□□ 0.88
MS4A18Q3C1V0 PTX3-201ENST00000295927 1940 ntAPPRIS P1 TSL 1 (best) BASIC20.56■□□□□ 0.88
MS4A18Q3C1V0 CNTFR-201ENST00000351266 1910 ntAPPRIS P1 TSL 1 (best) BASIC20.56■□□□□ 0.88
MS4A18Q3C1V0 C19orf12-204ENST00000392276 1912 ntTSL 1 (best) BASIC20.56■□□□□ 0.88
MS4A18Q3C1V0 SCAMP3-202ENST00000355379 1537 ntTSL 1 (best) BASIC20.56■□□□□ 0.88
MS4A18Q3C1V0 PHF11-202ENST00000378319 1359 ntAPPRIS P3 TSL 1 (best) BASIC20.56■□□□□ 0.88
MS4A18Q3C1V0 GNAS-201ENST00000265620 1866 ntAPPRIS P3 TSL 1 (best) BASIC20.56■□□□□ 0.88
MS4A18Q3C1V0 BCL2L12-212ENST00000616144 1854 ntAPPRIS P3 TSL 1 (best) BASIC20.56■□□□□ 0.88
MS4A18Q3C1V0 RBFOX1-206ENST00000535565 1599 ntTSL 2 BASIC20.55■□□□□ 0.88
MS4A18Q3C1V0 ZFP91-CNTF-201ENST00000389919 2319 ntAPPRIS P5 TSL 2 BASIC20.55■□□□□ 0.88
MS4A18Q3C1V0 LINC01578-209ENST00000557682 2683 ntTSL 2 BASIC20.55■□□□□ 0.88
MS4A18Q3C1V0 P3H3-201ENST00000290510 2632 ntAPPRIS P1 TSL 1 (best) BASIC20.55■□□□□ 0.88
MS4A18Q3C1V0 AL031848.2-201ENST00000607670 837 ntBASIC20.55■□□□□ 0.88
MS4A18Q3C1V0 ATAD3B-201ENST00000308647 2448 ntAPPRIS P1 TSL 1 (best) BASIC20.55■□□□□ 0.88
MS4A18Q3C1V0 GBX2-201ENST00000306318 2123 ntAPPRIS P1 TSL 1 (best) BASIC20.54■□□□□ 0.88
MS4A18Q3C1V0 NAAA-204ENST00000507187 1750 ntTSL 1 (best) BASIC20.54■□□□□ 0.88
MS4A18Q3C1V0 CCDC92-209ENST00000545891 1790 ntAPPRIS P1 TSL 2 BASIC20.54■□□□□ 0.88
MS4A18Q3C1V0 LSR-201ENST00000347609 1880 ntAPPRIS ALT2 TSL 1 (best) BASIC20.54■□□□□ 0.88
MS4A18Q3C1V0 LSR-213ENST00000605618 1885 ntAPPRIS ALT2 TSL 1 (best) BASIC20.54■□□□□ 0.88
MS4A18Q3C1V0 STMN4-204ENST00000519997 1623 ntTSL 2 BASIC20.54■□□□□ 0.88
MS4A18Q3C1V0 SNX10-207ENST00000446848 2613 ntAPPRIS P2 TSL 1 (best) BASIC20.54■□□□□ 0.88
MS4A18Q3C1V0 BRI3-201ENST00000297290 780 ntAPPRIS P1 TSL 1 (best) BASIC20.54■□□□□ 0.88
MS4A18Q3C1V0 OSCAR-206ENST00000391760 629 ntTSL 2 BASIC20.54■□□□□ 0.88
MS4A18Q3C1V0 TMEM238-201ENST00000444469 1000 ntAPPRIS P1 TSL 1 (best) BASIC20.54■□□□□ 0.88
MS4A18Q3C1V0 STK32C-205ENST00000456004 607 ntTSL 2 BASIC20.54■□□□□ 0.88
MS4A18Q3C1V0 SNAI3-AS1-203ENST00000565633 829 ntTSL 5 BASIC20.54■□□□□ 0.88
MS4A18Q3C1V0 NPAS1-208ENST00000602212 2117 ntAPPRIS P1 TSL 1 (best) BASIC20.54■□□□□ 0.88
MS4A18Q3C1V0 PNCK-215ENST00000447676 1585 ntTSL 2 BASIC20.54■□□□□ 0.88
MS4A18Q3C1V0 AC099805.1-201ENST00000523987 1797 ntTSL 1 (best) BASIC20.54■□□□□ 0.88
MS4A18Q3C1V0 AK8-201ENST00000298545 2072 ntAPPRIS P1 TSL 1 (best) BASIC20.54■□□□□ 0.88
MS4A18Q3C1V0 ZBTB45-205ENST00000600990 2159 ntAPPRIS P1 TSL 5 BASIC20.53■□□□□ 0.88
MS4A18Q3C1V0 KISS1R-201ENST00000234371 1625 ntAPPRIS P1 TSL 1 (best) BASIC20.53■□□□□ 0.88
MS4A18Q3C1V0 HTRA2-202ENST00000352222 1450 ntTSL 1 (best) BASIC20.53■□□□□ 0.88
MS4A18Q3C1V0 IRF3-227ENST00000600911 1637 ntTSL 5 BASIC20.53■□□□□ 0.88
MS4A18Q3C1V0 PPP4C-214ENST00000627746 1301 ntTSL 5 BASIC20.53■□□□□ 0.88
MS4A18Q3C1V0 CAPN10-208ENST00000404753 2570 ntAPPRIS ALT2 TSL 5 BASIC20.52■□□□□ 0.88
MS4A18Q3C1V0 NKX2-3-202ENST00000622383 1986 ntTSL 5 BASIC20.52■□□□□ 0.88
MS4A18Q3C1V0 SLC10A4-201ENST00000273861 1790 ntAPPRIS P1 TSL 1 (best) BASIC20.52■□□□□ 0.88
MS4A18Q3C1V0 NOX4-204ENST00000393282 560 ntTSL 1 (best) BASIC20.52■□□□□ 0.88
MS4A18Q3C1V0 AC137630.3-201ENST00000607245 391 ntBASIC20.52■□□□□ 0.88
MS4A18Q3C1V0 C6orf201-202ENST00000380175 1834 ntAPPRIS P1 TSL 1 (best) BASIC20.52■□□□□ 0.88
MS4A18Q3C1V0 EI24-213ENST00000618552 1747 ntTSL 5 BASIC20.52■□□□□ 0.88
MS4A18Q3C1V0 SLC25A29-201ENST00000359232 2385 ntAPPRIS P1 TSL 1 (best) BASIC20.51■□□□□ 0.87
MS4A18Q3C1V0 CDYL-203ENST00000397588 2184 ntAPPRIS P1 TSL 1 (best) BASIC20.51■□□□□ 0.87
MS4A18Q3C1V0 NEUROG3-201ENST00000242462 1376 ntAPPRIS P1 TSL 1 (best) BASIC20.51■□□□□ 0.87
MS4A18Q3C1V0 LGALS9B-202ENST00000423676 1713 ntAPPRIS ALT2 TSL 1 (best) BASIC20.51■□□□□ 0.87
MS4A18Q3C1V0 VSTM2L-201ENST00000373459 831 ntTSL 3 BASIC20.51■□□□□ 0.87
MS4A18Q3C1V0 RARRES2P1-201ENST00000474487 481 ntBASIC20.51■□□□□ 0.87
MS4A18Q3C1V0 RILP-201ENST00000301336 1771 ntAPPRIS P1 TSL 1 (best) BASIC20.51■□□□□ 0.87
MS4A18Q3C1V0 PPIL6-203ENST00000440797 1693 ntTSL 1 (best) BASIC20.51■□□□□ 0.87
MS4A18Q3C1V0 BOD1-202ENST00000311086 1562 ntAPPRIS P1 TSL 1 (best) BASIC20.51■□□□□ 0.87
MS4A18Q3C1V0 TRAP1-202ENST00000538171 2052 ntTSL 2 BASIC20.5■□□□□ 0.87
MS4A18Q3C1V0 STEAP2-207ENST00000402625 1372 ntTSL 5 BASIC20.5■□□□□ 0.87
MS4A18Q3C1V0 ST3GAL6-AS1-203ENST00000488132 769 ntTSL 3 BASIC20.5■□□□□ 0.87
MS4A18Q3C1V0 CTDSP2-203ENST00000547701 988 ntTSL 1 (best) BASIC20.5■□□□□ 0.87
MS4A18Q3C1V0 CAPNS1-207ENST00000589146 578 ntTSL 3 BASIC20.5■□□□□ 0.87
MS4A18Q3C1V0 FAM57A-202ENST00000308278 2412 ntAPPRIS P1 TSL 1 (best) BASIC20.5■□□□□ 0.87
MS4A18Q3C1V0 CHST6-202ENST00000390664 2093 ntAPPRIS P1 TSL 1 (best) BASIC20.5■□□□□ 0.87
MS4A18Q3C1V0 FJX1-201ENST00000317811 2450 ntAPPRIS P1 BASIC20.5■□□□□ 0.87
MS4A18Q3C1V0 AF117829.1-207ENST00000504145 1572 ntTSL 3 BASIC20.5■□□□□ 0.87
MS4A18Q3C1V0 PCSK6-218ENST00000619160 3093 ntAPPRIS ALT2 TSL 1 (best) BASIC20.5■□□□□ 0.87
MS4A18Q3C1V0 PSIP1-202ENST00000380716 1889 ntTSL 5 BASIC20.5■□□□□ 0.87
MS4A18Q3C1V0 TPI1-210ENST00000613953 1460 ntTSL 1 (best) BASIC20.5■□□□□ 0.87
MS4A18Q3C1V0 IKBKG-211ENST00000615874 1460 ntTSL 5 BASIC20.5■□□□□ 0.87
MS4A18Q3C1V0 IKBKG-215ENST00000619941 1463 ntTSL 5 BASIC20.5■□□□□ 0.87
MS4A18Q3C1V0 ROR1-202ENST00000371080 2305 ntTSL 1 (best) BASIC20.49■□□□□ 0.87
MS4A18Q3C1V0 CAMK2N1-201ENST00000375078 2336 ntAPPRIS P1 TSL 1 (best) BASIC20.49■□□□□ 0.87
MS4A18Q3C1V0 EVX1-201ENST00000222761 1500 ntTSL 1 (best) BASIC20.49■□□□□ 0.87
MS4A18Q3C1V0 PARP9-207ENST00000492382 1837 ntTSL 1 (best) BASIC20.49■□□□□ 0.87
MS4A18Q3C1V0 LRRC1-201ENST00000370882 808 ntTSL 3 BASIC20.49■□□□□ 0.87
MS4A18Q3C1V0 PRTG-204ENST00000561292 833 ntTSL 3 BASIC20.49■□□□□ 0.87
MS4A18Q3C1V0 MYL12B-203ENST00000581193 1249 ntAPPRIS P1 TSL 3 BASIC20.49■□□□□ 0.87
MS4A18Q3C1V0 PON2-202ENST00000433091 1726 ntTSL 1 (best) BASIC20.49■□□□□ 0.87
MS4A18Q3C1V0 TTC39A-203ENST00000371747 1876 ntTSL 2 BASIC20.49■□□□□ 0.87
MS4A18Q3C1V0 PLEKHB1-201ENST00000227214 2016 ntAPPRIS ALT1 TSL 1 (best) BASIC20.49■□□□□ 0.87
MS4A18Q3C1V0 VSTM4-201ENST00000298454 2170 ntAPPRIS P3 TSL 2 BASIC20.49■□□□□ 0.87
MS4A18Q3C1V0 HORMAD2-201ENST00000336726 2187 ntAPPRIS P1 TSL 1 (best) BASIC20.49■□□□□ 0.87
MS4A18Q3C1V0 CACNG6-203ENST00000352529 1635 ntTSL 5 BASIC20.49■□□□□ 0.87
MS4A18Q3C1V0 SLC9A3-201ENST00000264938 2584 ntAPPRIS P3 TSL 1 (best) BASIC20.48■□□□□ 0.87
MS4A18Q3C1V0 CLEC14A-201ENST00000342213 2267 ntAPPRIS P1 BASIC20.48■□□□□ 0.87
MS4A18Q3C1V0 TMEM150C-201ENST00000449862 1990 ntAPPRIS P1 TSL 1 (best) BASIC20.48■□□□□ 0.87
Retrieved 100 of 98,524 protein–RNA pairs in 14.3 ms