Protein–RNA interactions for Protein: Q2WGJ8

TMEM249, Transmembrane protein 249, humanhuman

Predictions only

Length 235 aa.

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Protein RNA Prediction (catRAPID) Interaction (ENCODE eCLIP)
Gene UniProt Accession Transcript Symbol Ensembl Transcript ID Length Transcript Status Prediction Score Prediction z-Score p-Value Fold Change
TMEM249Q2WGJ8 FBXL20-203ENST00000577399 1620 ntTSL 5 BASIC19.35■□□□□ 0.69
TMEM249Q2WGJ8 ATP6V0A2-209ENST00000613625 1620 ntTSL 1 (best) BASIC19.35■□□□□ 0.69
TMEM249Q2WGJ8 RDH14-201ENST00000381249 1587 ntAPPRIS P1 TSL 1 (best) BASIC19.35■□□□□ 0.69
TMEM249Q2WGJ8 NFKBIE-201ENST00000275015 2581 ntTSL 1 (best) BASIC19.35■□□□□ 0.69
TMEM249Q2WGJ8 KLF15-201ENST00000296233 2574 ntAPPRIS P1 TSL 1 (best) BASIC19.35■□□□□ 0.69
TMEM249Q2WGJ8 TSPAN10-203ENST00000574882 1837 ntAPPRIS P2 TSL 1 (best) BASIC19.35■□□□□ 0.69
TMEM249Q2WGJ8 IL17RE-203ENST00000421412 2158 ntAPPRIS ALT2 TSL 1 (best) BASIC19.34■□□□□ 0.69
TMEM249Q2WGJ8 WIPI2-204ENST00000404704 1663 ntTSL 5 BASIC19.34■□□□□ 0.69
TMEM249Q2WGJ8 KAT5-208ENST00000530446 1697 ntTSL 1 (best) BASIC19.34■□□□□ 0.69
TMEM249Q2WGJ8 IFNL4-201ENST00000606380 1637 ntAPPRIS P5 TSL 1 (best) BASIC19.34■□□□□ 0.69
TMEM249Q2WGJ8 EIF6-201ENST00000374436 1252 ntAPPRIS P1 TSL 1 (best) BASIC19.34■□□□□ 0.69
TMEM249Q2WGJ8 ZNF32-202ENST00000395797 1201 ntAPPRIS P1 TSL 2 BASIC19.34■□□□□ 0.69
TMEM249Q2WGJ8 MPP5-205ENST00000556345 1163 ntTSL 2 BASIC19.34■□□□□ 0.69
TMEM249Q2WGJ8 CPLX1-201ENST00000304062 2181 ntAPPRIS P1 TSL 1 (best) BASIC19.34■□□□□ 0.69
TMEM249Q2WGJ8 GBX2-201ENST00000306318 2123 ntAPPRIS P1 TSL 1 (best) BASIC19.34■□□□□ 0.69
TMEM249Q2WGJ8 PINK1-201ENST00000321556 2660 ntAPPRIS P1 TSL 1 (best) BASIC19.34■□□□□ 0.69
TMEM249Q2WGJ8 EGR4-201ENST00000436467 2377 ntAPPRIS ALT2 TSL 1 (best) BASIC19.34■□□□□ 0.69
TMEM249Q2WGJ8 AC011511.4-201ENST00000586529 1850 ntAPPRIS P1 TSL 5 BASIC19.33■□□□□ 0.69
TMEM249Q2WGJ8 CDKN2D-201ENST00000335766 1086 ntAPPRIS P1 TSL 1 (best) BASIC19.33■□□□□ 0.68
TMEM249Q2WGJ8 SUDS3P1-201ENST00000505831 966 ntBASIC19.33■□□□□ 0.68
TMEM249Q2WGJ8 AC019163.1-201ENST00000512634 610 ntTSL 2 BASIC19.33■□□□□ 0.68
TMEM249Q2WGJ8 AL359317.1-201ENST00000556316 578 ntTSL 4 BASIC19.33■□□□□ 0.68
TMEM249Q2WGJ8 AL031432.3-201ENST00000607698 485 ntBASIC19.33■□□□□ 0.68
TMEM249Q2WGJ8 AC092666.2-201ENST00000613287 246 ntBASIC19.33■□□□□ 0.68
TMEM249Q2WGJ8 SHISA9-205ENST00000639941 1135 ntAPPRIS ALT2 TSL 5 BASIC19.33■□□□□ 0.68
TMEM249Q2WGJ8 CCR10-201ENST00000332438 1773 ntAPPRIS P1 TSL 1 (best) BASIC19.33■□□□□ 0.68
TMEM249Q2WGJ8 CRLF1-201ENST00000392386 1792 ntAPPRIS P1 TSL 1 (best) BASIC19.33■□□□□ 0.68
TMEM249Q2WGJ8 CYS1-201ENST00000381813 2738 ntAPPRIS P1 TSL 1 (best) BASIC19.33■□□□□ 0.68
TMEM249Q2WGJ8 TP53I3-201ENST00000238721 1998 ntAPPRIS P1 TSL 1 (best) BASIC19.33■□□□□ 0.68
TMEM249Q2WGJ8 SERF1A-202ENST00000354833 1889 ntTSL 1 (best) BASIC19.33■□□□□ 0.68
TMEM249Q2WGJ8 SERF1B-201ENST00000380750 1889 ntTSL 1 (best) BASIC19.33■□□□□ 0.68
TMEM249Q2WGJ8 ZDHHC20-203ENST00000400590 1869 ntAPPRIS ALT2 TSL 5 BASIC19.33■□□□□ 0.68
TMEM249Q2WGJ8 ACSF2-203ENST00000502667 2098 ntTSL 2 BASIC19.32■□□□□ 0.68
TMEM249Q2WGJ8 HSPBP1-201ENST00000255631 1768 ntAPPRIS P1 TSL 1 (best) BASIC19.32■□□□□ 0.68
TMEM249Q2WGJ8 LURAP1L-201ENST00000319264 1753 ntAPPRIS P1 TSL 1 (best) BASIC19.32■□□□□ 0.68
TMEM249Q2WGJ8 CDKN2A-210ENST00000530628 748 ntAPPRIS P1 TSL 5 BASIC19.32■□□□□ 0.68
TMEM249Q2WGJ8 AP006621.1-201ENST00000532946 536 ntTSL 5 BASIC19.32■□□□□ 0.68
TMEM249Q2WGJ8 AC243829.1-202ENST00000618848 486 ntTSL 3 BASIC19.32■□□□□ 0.68
TMEM249Q2WGJ8 SRR-201ENST00000344595 2728 ntAPPRIS P1 TSL 1 (best) BASIC19.32■□□□□ 0.68
TMEM249Q2WGJ8 ERN1-208ENST00000606895 2068 ntBASIC19.32■□□□□ 0.68
TMEM249Q2WGJ8 THRA-202ENST00000394121 2260 ntTSL 2 BASIC19.32■□□□□ 0.68
TMEM249Q2WGJ8 NRXN1-205ENST00000401710 2873 ntTSL 5 BASIC19.32■□□□□ 0.68
TMEM249Q2WGJ8 BTBD6-203ENST00000392554 2176 ntAPPRIS P2 TSL 1 (best) BASIC19.32■□□□□ 0.68
TMEM249Q2WGJ8 COMMD5-201ENST00000305103 1373 ntAPPRIS P1 TSL 1 (best) BASIC19.32■□□□□ 0.68
TMEM249Q2WGJ8 RARA-202ENST00000394081 2285 ntTSL 1 (best) BASIC19.31■□□□□ 0.68
TMEM249Q2WGJ8 TSPAN4-202ENST00000397396 1332 ntTSL 5 BASIC19.31■□□□□ 0.68
TMEM249Q2WGJ8 SIX2-201ENST00000303077 2205 ntAPPRIS P1 TSL 1 (best) BASIC19.31■□□□□ 0.68
TMEM249Q2WGJ8 SPOCK3-221ENST00000512648 1456 ntTSL 1 (best) BASIC19.31■□□□□ 0.68
TMEM249Q2WGJ8 AP2S1-201ENST00000263270 935 ntAPPRIS P3 TSL 1 (best) BASIC19.31■□□□□ 0.68
TMEM249Q2WGJ8 EDA-201ENST00000338901 1233 ntBASIC19.31■□□□□ 0.68
TMEM249Q2WGJ8 LGR4-203ENST00000480977 492 ntTSL 2 BASIC19.31■□□□□ 0.68
TMEM249Q2WGJ8 CDKN2A-206ENST00000494262 989 ntTSL 3 BASIC19.31■□□□□ 0.68
TMEM249Q2WGJ8 GNB2-203ENST00000393926 1641 ntAPPRIS P1 TSL 5 BASIC19.31■□□□□ 0.68
TMEM249Q2WGJ8 EVA1C-201ENST00000300255 1998 ntAPPRIS P3 TSL 1 (best) BASIC19.31■□□□□ 0.68
TMEM249Q2WGJ8 DLG3-203ENST00000374360 5905 ntAPPRIS P2 TSL 1 (best) BASIC19.31■□□□□ 0.68
TMEM249Q2WGJ8 ID4-201ENST00000378700 2344 ntAPPRIS P1 TSL 1 (best) BASIC19.31■□□□□ 0.68
TMEM249Q2WGJ8 MBD3-202ENST00000434436 2439 ntAPPRIS P1 TSL 1 (best) BASIC19.31■□□□□ 0.68
TMEM249Q2WGJ8 E2F5-203ENST00000418930 1890 ntAPPRIS ALT2 TSL 1 (best) BASIC19.31■□□□□ 0.68
TMEM249Q2WGJ8 SLC30A5-201ENST00000380860 1317 ntTSL 1 (best) BASIC19.3■□□□□ 0.68
TMEM249Q2WGJ8 CCDC166-201ENST00000542437 1320 ntAPPRIS P1 TSL 2 BASIC19.3■□□□□ 0.68
TMEM249Q2WGJ8 CHSY1-201ENST00000254190 4550 ntAPPRIS P1 TSL 1 (best) BASIC19.3■□□□□ 0.68
TMEM249Q2WGJ8 LYPD2-201ENST00000359228 594 ntAPPRIS P1 TSL 1 (best) BASIC19.3■□□□□ 0.68
TMEM249Q2WGJ8 LBH-205ENST00000407930 756 ntTSL 2 BASIC19.3■□□□□ 0.68
TMEM249Q2WGJ8 AL355987.3-201ENST00000456614 735 ntAPPRIS P1 TSL 4 BASIC19.3■□□□□ 0.68
TMEM249Q2WGJ8 SMIM29-205ENST00000468145 903 ntTSL 2 BASIC19.3■□□□□ 0.68
TMEM249Q2WGJ8 SMIM29-207ENST00000481533 1053 ntAPPRIS P1 TSL 1 (best) BASIC19.3■□□□□ 0.68
TMEM249Q2WGJ8 RASGEF1B-208ENST00000510780 539 ntTSL 3 BASIC19.3■□□□□ 0.68
TMEM249Q2WGJ8 RASGEF1B-209ENST00000512343 498 ntTSL 3 BASIC19.3■□□□□ 0.68
TMEM249Q2WGJ8 KRTAP5-4-202ENST00000616115 660 ntAPPRIS ALT2 TSL 5 BASIC19.3■□□□□ 0.68
TMEM249Q2WGJ8 ATP10A-207ENST00000619904 988 ntTSL 5 BASIC19.3■□□□□ 0.68
TMEM249Q2WGJ8 AL355001.2-201ENST00000620617 1191 ntBASIC19.3■□□□□ 0.68
TMEM249Q2WGJ8 KHSRP-201ENST00000398148 2993 ntAPPRIS P2 TSL 1 (best) BASIC19.3■□□□□ 0.68
TMEM249Q2WGJ8 ARMC10-202ENST00000323716 2635 ntTSL 1 (best) BASIC19.3■□□□□ 0.68
TMEM249Q2WGJ8 SYT7-203ENST00000539008 2061 ntTSL 5 BASIC19.29■□□□□ 0.68
TMEM249Q2WGJ8 FAM118A-205ENST00000441876 1776 ntAPPRIS P1 TSL 1 (best) BASIC19.29■□□□□ 0.68
TMEM249Q2WGJ8 ANKRD54-201ENST00000215941 2184 ntAPPRIS P1 TSL 1 (best) BASIC19.29■□□□□ 0.68
TMEM249Q2WGJ8 ITM2C-203ENST00000335005 1889 ntTSL 1 (best) BASIC19.29■□□□□ 0.68
TMEM249Q2WGJ8 AC024257.2-201ENST00000549699 147 ntBASIC19.29■□□□□ 0.68
TMEM249Q2WGJ8 NEDD4L-237ENST00000617539 728 ntTSL 2 BASIC19.29■□□□□ 0.68
TMEM249Q2WGJ8 PTH1R-201ENST00000313049 2123 ntAPPRIS P1 TSL 1 (best) BASIC19.28■□□□□ 0.68
TMEM249Q2WGJ8 NDEL1-201ENST00000334527 2372 ntAPPRIS P1 TSL 1 (best) BASIC19.28■□□□□ 0.68
TMEM249Q2WGJ8 MFSD7-202ENST00000347950 1599 ntTSL 2 BASIC19.28■□□□□ 0.68
TMEM249Q2WGJ8 C7orf49-203ENST00000430372 1579 ntTSL 5 BASIC19.28■□□□□ 0.68
TMEM249Q2WGJ8 LYPLA1-215ENST00000618914 2482 ntTSL 5 BASIC19.28■□□□□ 0.68
TMEM249Q2WGJ8 TCEA1-211ENST00000522635 1432 ntTSL 2 BASIC19.28■□□□□ 0.68
TMEM249Q2WGJ8 AC026271.2-201ENST00000428091 497 ntBASIC19.28■□□□□ 0.68
TMEM249Q2WGJ8 CHAC1-201ENST00000444189 1204 ntTSL 1 (best) BASIC19.28■□□□□ 0.68
TMEM249Q2WGJ8 PYCR1-202ENST00000337943 1890 ntTSL 1 (best) BASIC19.28■□□□□ 0.68
TMEM249Q2WGJ8 MEIOB-203ENST00000412554 1884 ntAPPRIS P1 TSL 5 BASIC19.28■□□□□ 0.68
TMEM249Q2WGJ8 TST-202ENST00000403892 1797 ntAPPRIS P1 TSL 1 (best) BASIC19.27■□□□□ 0.68
TMEM249Q2WGJ8 TMEM170A-206ENST00000569276 609 ntTSL 2 BASIC19.27■□□□□ 0.68
TMEM249Q2WGJ8 ACBD4-216ENST00000619916 1276 ntTSL 5 BASIC19.27■□□□□ 0.68
TMEM249Q2WGJ8 GADD45A-202ENST00000370986 1496 ntAPPRIS P1 TSL 1 (best) BASIC19.27■□□□□ 0.67
TMEM249Q2WGJ8 KREMEN2-204ENST00000572045 2339 ntAPPRIS ALT2 TSL 1 (best) BASIC19.26■□□□□ 0.67
TMEM249Q2WGJ8 PURG-202ENST00000475541 2875 ntAPPRIS P1 BASIC19.26■□□□□ 0.67
TMEM249Q2WGJ8 ZNF821-201ENST00000313565 1874 ntTSL 1 (best) BASIC19.26■□□□□ 0.67
TMEM249Q2WGJ8 ZFPM1-201ENST00000319555 5380 ntAPPRIS P1 TSL 1 (best) BASIC19.26■□□□□ 0.67
TMEM249Q2WGJ8 GFRA4-201ENST00000290417 1427 ntAPPRIS ALT2 TSL 1 (best) BASIC19.26■□□□□ 0.67
TMEM249Q2WGJ8 AC006455.5-202ENST00000615248 2284 ntTSL 1 (best) BASIC19.26■□□□□ 0.67
TMEM249Q2WGJ8 BIN1-205ENST00000351659 2365 ntTSL 1 (best) BASIC19.26■□□□□ 0.67
Retrieved 100 of 98,524 protein–RNA pairs in 74.8 ms