Protein–RNA interactions for Protein: P56557

TMEM50B, Transmembrane protein 50B, humanhuman

Predictions only

Length 158 aa.

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Protein RNA Prediction (catRAPID) Interaction (ENCODE eCLIP)
Gene UniProt Accession Transcript Symbol Ensembl Transcript ID Length Transcript Status Prediction Score Prediction z-Score p-Value Fold Change
TMEM50BP56557 MAPKAPK5-AS1-201ENST00000428207 2290 ntTSL 1 (best) BASIC19.5■□□□□ 0.71
TMEM50BP56557 SLC35B2-201ENST00000393810 1898 ntTSL 2 BASIC19.5■□□□□ 0.71
TMEM50BP56557 JMJD8-201ENST00000412368 2038 ntAPPRIS P2 TSL 1 (best) BASIC19.49■□□□□ 0.71
TMEM50BP56557 AC009831.1-201ENST00000580420 1582 ntBASIC19.49■□□□□ 0.71
TMEM50BP56557 NR6A1-201ENST00000344523 1846 ntAPPRIS ALT2 TSL 5 BASIC19.49■□□□□ 0.71
TMEM50BP56557 PDIA6-207ENST00000540494 2509 ntAPPRIS ALT1 TSL 2 BASIC19.49■□□□□ 0.71
TMEM50BP56557 PON2-202ENST00000433091 1726 ntTSL 1 (best) BASIC19.49■□□□□ 0.71
TMEM50BP56557 FAM98C-202ENST00000343358 1006 ntTSL 1 (best) BASIC19.49■□□□□ 0.71
TMEM50BP56557 CMPK2-202ENST00000404168 2042 ntAPPRIS ALT2 TSL 1 (best) BASIC19.49■□□□□ 0.71
TMEM50BP56557 SPAG7-205ENST00000573366 1668 ntTSL 3 BASIC19.49■□□□□ 0.71
TMEM50BP56557 SYNDIG1-201ENST00000376862 2522 ntAPPRIS P1 TSL 1 (best) BASIC19.49■□□□□ 0.71
TMEM50BP56557 TRIM72-202ENST00000613872 1573 ntTSL 1 (best) BASIC19.49■□□□□ 0.71
TMEM50BP56557 HACD1-202ENST00000361271 2237 ntAPPRIS P1 TSL 1 (best) BASIC19.48■□□□□ 0.71
TMEM50BP56557 APBB3-204ENST00000358580 2020 ntTSL 5 BASIC19.48■□□□□ 0.71
TMEM50BP56557 RILP-201ENST00000301336 1771 ntAPPRIS P1 TSL 1 (best) BASIC19.48■□□□□ 0.71
TMEM50BP56557 MEIOB-202ENST00000397344 1792 ntTSL 5 BASIC19.48■□□□□ 0.71
TMEM50BP56557 MAPK3-203ENST00000395199 1074 ntAPPRIS ALT2 TSL 1 (best) BASIC19.48■□□□□ 0.71
TMEM50BP56557 MAPK3-205ENST00000395202 1008 ntTSL 1 (best) BASIC19.48■□□□□ 0.71
TMEM50BP56557 AGO3-204ENST00000397828 1035 ntTSL 2 BASIC19.48■□□□□ 0.71
TMEM50BP56557 GPX1-201ENST00000419349 1106 ntBASIC19.48■□□□□ 0.71
TMEM50BP56557 PSMG4-206ENST00000438998 838 ntAPPRIS P1 TSL 2 BASIC19.48■□□□□ 0.71
TMEM50BP56557 RAB6B-203ENST00000469959 500 ntTSL 3 BASIC19.48■□□□□ 0.71
TMEM50BP56557 HES4-204ENST00000484667 667 ntTSL 3 BASIC19.48■□□□□ 0.71
TMEM50BP56557 UBE2D2-205ENST00000505548 1113 ntTSL 1 (best) BASIC19.48■□□□□ 0.71
TMEM50BP56557 RIOX1-201ENST00000304061 2429 ntAPPRIS P1 BASIC19.48■□□□□ 0.71
TMEM50BP56557 FOXP4-203ENST00000373060 5948 ntTSL 5 BASIC19.48■□□□□ 0.71
TMEM50BP56557 FOXP4-204ENST00000373063 5910 ntTSL 1 (best) BASIC19.48■□□□□ 0.71
TMEM50BP56557 ANOS2P-203ENST00000472227 1816 ntBASIC19.48■□□□□ 0.71
TMEM50BP56557 POLDIP2-201ENST00000540200 2121 ntAPPRIS P1 TSL 1 (best) BASIC19.48■□□□□ 0.71
TMEM50BP56557 DUSP22-201ENST00000344450 1485 ntTSL 1 (best) BASIC19.48■□□□□ 0.71
TMEM50BP56557 STMN4-204ENST00000519997 1623 ntTSL 2 BASIC19.47■□□□□ 0.71
TMEM50BP56557 PHACTR2-208ENST00000440869 2569 ntAPPRIS ALT2 TSL 2 BASIC19.47■□□□□ 0.71
TMEM50BP56557 DNAAF3-203ENST00000524407 2059 ntAPPRIS ALT2 TSL 1 (best) BASIC19.47■□□□□ 0.71
TMEM50BP56557 UPF3A-201ENST00000351487 2235 ntTSL 1 (best) BASIC19.47■□□□□ 0.71
TMEM50BP56557 PFKFB3-201ENST00000317350 1999 ntAPPRIS ALT1 TSL 5 BASIC19.47■□□□□ 0.71
TMEM50BP56557 PTPMT1-203ENST00000426530 1014 ntTSL 1 (best) BASIC19.47■□□□□ 0.71
TMEM50BP56557 RHOBTB3-206ENST00000506817 1432 ntTSL 2 BASIC19.47■□□□□ 0.71
TMEM50BP56557 FHL2-203ENST00000358129 1578 ntTSL 5 BASIC19.47■□□□□ 0.71
TMEM50BP56557 PPP1CC-206ENST00000550991 1882 ntTSL 2 BASIC19.47■□□□□ 0.71
TMEM50BP56557 MATK-202ENST00000395040 1907 ntAPPRIS ALT2 TSL 1 (best) BASIC19.47■□□□□ 0.71
TMEM50BP56557 DENND1A-201ENST00000373618 3003 ntTSL 1 (best) BASIC19.46■□□□□ 0.71
TMEM50BP56557 AC096541.1-201ENST00000445070 1807 ntTSL 2 BASIC19.46■□□□□ 0.71
TMEM50BP56557 ARHGAP27-207ENST00000528273 2319 ntTSL 1 (best) BASIC19.46■□□□□ 0.71
TMEM50BP56557 SPON2-222ENST00000617421 2156 ntAPPRIS P1 TSL 5 BASIC19.46■□□□□ 0.71
TMEM50BP56557 AC090877.2-201ENST00000558441 1738 ntBASIC19.46■□□□□ 0.71
TMEM50BP56557 EI24-213ENST00000618552 1747 ntTSL 5 BASIC19.46■□□□□ 0.71
TMEM50BP56557 MRPL51-201ENST00000229238 1234 ntAPPRIS P1 TSL 1 (best) BASIC19.46■□□□□ 0.71
TMEM50BP56557 ENDOG-201ENST00000372642 1172 ntAPPRIS P1 TSL 1 (best) BASIC19.46■□□□□ 0.71
TMEM50BP56557 CAPNS1-211ENST00000590874 926 ntTSL 5 BASIC19.46■□□□□ 0.71
TMEM50BP56557 CASTOR2-201ENST00000616305 1257 ntAPPRIS P1 TSL 1 (best) BASIC19.46■□□□□ 0.71
TMEM50BP56557 AC133552.2-201ENST00000619106 1032 ntBASIC19.46■□□□□ 0.71
TMEM50BP56557 KLC3-201ENST00000391946 1780 ntAPPRIS P2 TSL 1 (best) BASIC19.46■□□□□ 0.71
TMEM50BP56557 BCL7B-202ENST00000411832 1458 ntTSL 2 BASIC19.46■□□□□ 0.71
TMEM50BP56557 DONSON-202ENST00000303113 2028 ntTSL 5 BASIC19.46■□□□□ 0.71
TMEM50BP56557 PPP1R12C-201ENST00000263433 2924 ntAPPRIS P1 TSL 1 (best) BASIC19.45■□□□□ 0.7
TMEM50BP56557 CCDC9-201ENST00000221922 2093 ntAPPRIS P1 TSL 1 (best) BASIC19.45■□□□□ 0.7
TMEM50BP56557 AEBP2-204ENST00000398864 5099 ntAPPRIS P4 TSL 1 (best) BASIC19.45■□□□□ 0.7
TMEM50BP56557 TMEM185B-201ENST00000426077 2131 ntAPPRIS P1 BASIC19.45■□□□□ 0.7
TMEM50BP56557 PPP4C-201ENST00000279387 1407 ntAPPRIS P1 TSL 1 (best) BASIC19.45■□□□□ 0.7
TMEM50BP56557 WBP1-201ENST00000233615 1294 ntAPPRIS P2 TSL 1 (best) BASIC19.45■□□□□ 0.7
TMEM50BP56557 IGF2-AS-201ENST00000381361 2063 ntTSL 2 BASIC19.45■□□□□ 0.7
TMEM50BP56557 BTBD6-201ENST00000327471 1948 ntAPPRIS ALT2 TSL 2 BASIC19.45■□□□□ 0.7
TMEM50BP56557 FLOT1-201ENST00000376389 1912 ntAPPRIS P1 TSL 1 (best) BASIC19.45■□□□□ 0.7
TMEM50BP56557 AL117328.2-201ENST00000624617 1940 ntBASIC19.45■□□□□ 0.7
TMEM50BP56557 MATK-204ENST00000585778 1994 ntAPPRIS ALT2 TSL 1 (best) BASIC19.44■□□□□ 0.7
TMEM50BP56557 DONSON-204ENST00000432378 1618 ntTSL 5 BASIC19.44■□□□□ 0.7
TMEM50BP56557 SLC25A42-201ENST00000318596 3120 ntAPPRIS P1 TSL 1 (best) BASIC19.44■□□□□ 0.7
TMEM50BP56557 RPS2P7-201ENST00000447334 885 ntBASIC19.44■□□□□ 0.7
TMEM50BP56557 TNFRSF10B-202ENST00000347739 1723 ntAPPRIS ALT2 TSL 1 (best) BASIC19.44■□□□□ 0.7
TMEM50BP56557 NIPSNAP1-201ENST00000216121 2237 ntAPPRIS P1 TSL 1 (best) BASIC19.44■□□□□ 0.7
TMEM50BP56557 EFCC1-201ENST00000436022 2691 ntAPPRIS P1 TSL 5 BASIC19.44■□□□□ 0.7
TMEM50BP56557 KCNAB3-201ENST00000303790 2458 ntAPPRIS P1 TSL 1 (best) BASIC19.44■□□□□ 0.7
TMEM50BP56557 TLX1-203ENST00000467928 1838 ntTSL 1 (best) BASIC19.44■□□□□ 0.7
TMEM50BP56557 OSCAR-202ENST00000351806 1375 ntAPPRIS ALT2 TSL 1 (best) BASIC19.44■□□□□ 0.7
TMEM50BP56557 ITM2C-202ENST00000326427 2078 ntAPPRIS P1 TSL 1 (best) BASIC19.44■□□□□ 0.7
TMEM50BP56557 LYPLA1-201ENST00000316963 2585 ntAPPRIS P1 TSL 1 (best) BASIC19.43■□□□□ 0.7
TMEM50BP56557 C5orf49-201ENST00000399810 2385 ntAPPRIS P2 TSL 1 (best) BASIC19.43■□□□□ 0.7
TMEM50BP56557 TSSK1B-201ENST00000390666 2478 ntAPPRIS P1 BASIC19.43■□□□□ 0.7
TMEM50BP56557 MAP3K8-203ENST00000375322 932 ntTSL 2 BASIC19.43■□□□□ 0.7
TMEM50BP56557 YPEL1-202ENST00000403503 466 ntTSL 3 BASIC19.43■□□□□ 0.7
TMEM50BP56557 TSPY4-202ENST00000426950 1179 ntAPPRIS P5 TSL 5 BASIC19.43■□□□□ 0.7
TMEM50BP56557 NKX2-5-204ENST00000521848 1027 ntTSL 2 BASIC19.43■□□□□ 0.7
TMEM50BP56557 TANGO2-207ENST00000420290 1859 ntTSL 2 BASIC19.43■□□□□ 0.7
TMEM50BP56557 LYRM1-201ENST00000219168 1626 ntAPPRIS P1 TSL 2 BASIC19.43■□□□□ 0.7
TMEM50BP56557 NRG3-201ENST00000372141 2158 ntAPPRIS P3 TSL 1 (best) BASIC19.43■□□□□ 0.7
TMEM50BP56557 SHMT1-201ENST00000316694 2464 ntAPPRIS P1 TSL 1 (best) BASIC19.43■□□□□ 0.7
TMEM50BP56557 SLC25A29-202ENST00000392908 2242 ntTSL 2 BASIC19.43■□□□□ 0.7
TMEM50BP56557 AC092068.2-201ENST00000590491 1708 ntBASIC19.42■□□□□ 0.7
TMEM50BP56557 CTDSPL-206ENST00000443503 4640 ntAPPRIS ALT1 TSL 1 (best) BASIC19.42■□□□□ 0.7
TMEM50BP56557 P2RX5-201ENST00000225328 2309 ntAPPRIS P3 TSL 1 (best) BASIC19.42■□□□□ 0.7
TMEM50BP56557 DUSP8P3-201ENST00000399571 1760 ntBASIC19.42■□□□□ 0.7
TMEM50BP56557 MROH6-202ENST00000524906 1794 ntAPPRIS ALT2 TSL 3 BASIC19.42■□□□□ 0.7
TMEM50BP56557 AC138647.1-201ENST00000427937 648 ntAPPRIS P1 TSL 5 BASIC19.42■□□□□ 0.7
TMEM50BP56557 AKT1S1-204ENST00000391832 1911 ntAPPRIS P1 TSL 1 (best) BASIC19.42■□□□□ 0.7
TMEM50BP56557 ZNF668-205ENST00000426488 2282 ntTSL 5 BASIC19.42■□□□□ 0.7
TMEM50BP56557 HOXA10-201ENST00000283921 2541 ntAPPRIS P2 TSL 1 (best) BASIC19.42■□□□□ 0.7
TMEM50BP56557 MRPL38-201ENST00000309352 1888 ntAPPRIS P1 TSL 1 (best) BASIC19.41■□□□□ 0.7
TMEM50BP56557 FAM136A-202ENST00000430566 885 ntTSL 3 BASIC19.41■□□□□ 0.7
TMEM50BP56557 MANF-204ENST00000528157 1153 ntAPPRIS P1 TSL 1 (best) BASIC19.41■□□□□ 0.7
TMEM50BP56557 SOCS2-202ENST00000536696 1065 ntAPPRIS P1 TSL 2 BASIC19.41■□□□□ 0.7
Retrieved 100 of 98,524 protein–RNA pairs in 51.5 ms