Protein–RNA interactions for Protein: P55055

NR1H2, Oxysterols receptor LXR-beta, humanhuman

Predictions only

Length 460 aa.

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Protein RNA Prediction (catRAPID) Interaction (ENCODE eCLIP)
Gene UniProt Accession Transcript Symbol Ensembl Transcript ID Length Transcript Status Prediction Score Prediction z-Score p-Value Fold Change
NR1H2P55055 CHKA-202ENST00000356135 1755 ntAPPRIS ALT2 TSL 1 (best) BASIC21.62■■□□□ 1.05
NR1H2P55055 C19orf12-207ENST00000592153 1504 ntTSL 1 (best) BASIC21.62■■□□□ 1.05
NR1H2P55055 METTL24-201ENST00000338882 1119 ntAPPRIS P1 TSL 5 BASIC21.62■■□□□ 1.05
NR1H2P55055 ZGPAT-201ENST00000328969 1945 ntTSL 2 BASIC21.62■■□□□ 1.05
NR1H2P55055 NEK6-214ENST00000545174 2573 ntAPPRIS P1 TSL 1 (best) BASIC21.62■■□□□ 1.05
NR1H2P55055 ANXA8-204ENST00000583911 1874 ntTSL 2 BASIC21.62■■□□□ 1.05
NR1H2P55055 REPS2-202ENST00000357277 7953 ntAPPRIS P3 TSL 1 (best) BASIC21.62■■□□□ 1.05
NR1H2P55055 SLC6A10P-202ENST00000431994 2058 ntBASIC21.62■■□□□ 1.05
NR1H2P55055 SLC9A3-AS1-207ENST00000607286 1357 ntTSL 5 BASIC21.61■■□□□ 1.05
NR1H2P55055 HAS1-202ENST00000540069 2110 ntAPPRIS ALT2 TSL 1 (best) BASIC21.61■■□□□ 1.05
NR1H2P55055 DOK3-205ENST00000501403 1872 ntAPPRIS P1 TSL 5 BASIC21.61■■□□□ 1.05
NR1H2P55055 AL033527.3-201ENST00000566366 1196 ntBASIC21.61■■□□□ 1.05
NR1H2P55055 PAIP1-208ENST00000514514 1603 ntTSL 5 BASIC21.61■■□□□ 1.05
NR1H2P55055 KCTD8-201ENST00000360029 2587 ntAPPRIS P1 TSL 1 (best) BASIC21.61■■□□□ 1.05
NR1H2P55055 TMEM259-201ENST00000333175 2581 ntAPPRIS P3 TSL 1 (best) BASIC21.6■■□□□ 1.05
NR1H2P55055 EYA2-203ENST00000357410 2465 ntTSL 1 (best) BASIC21.6■■□□□ 1.05
NR1H2P55055 KRT18P60-201ENST00000312876 1297 ntBASIC21.6■■□□□ 1.05
NR1H2P55055 TSPY13P-201ENST00000338964 914 ntBASIC21.6■■□□□ 1.05
NR1H2P55055 RPL27A-206ENST00000530022 878 ntTSL 1 (best) BASIC21.6■■□□□ 1.05
NR1H2P55055 CCDC47-204ENST00000582252 1719 ntTSL 2 BASIC21.6■■□□□ 1.05
NR1H2P55055 CIB2-202ENST00000539011 1511 ntTSL 1 (best) BASIC21.6■■□□□ 1.05
NR1H2P55055 MED17-221ENST00000639724 2317 ntTSL 5 BASIC21.6■■□□□ 1.05
NR1H2P55055 TSEN15-201ENST00000361641 1960 ntAPPRIS P1 TSL 1 (best) BASIC21.59■■□□□ 1.05
NR1H2P55055 SLC22A17-201ENST00000206544 2284 ntAPPRIS P4 TSL 1 (best) BASIC21.59■■□□□ 1.05
NR1H2P55055 SMPD5-203ENST00000639008 1464 ntBASIC21.59■■□□□ 1.05
NR1H2P55055 FOXO6-202ENST00000641094 1476 ntAPPRIS P1 BASIC21.59■■□□□ 1.05
NR1H2P55055 AC127496.7-201ENST00000625110 1798 ntBASIC21.59■■□□□ 1.05
NR1H2P55055 UPF3A-202ENST00000375299 2387 ntAPPRIS P1 TSL 1 (best) BASIC21.59■■□□□ 1.05
NR1H2P55055 REEP5-202ENST00000379638 3326 ntAPPRIS P1 TSL 1 (best) BASIC21.59■■□□□ 1.05
NR1H2P55055 ARHGEF9-210ENST00000623517 2143 ntTSL 2 BASIC21.59■■□□□ 1.05
NR1H2P55055 SLC9A3-203ENST00000514375 2504 ntAPPRIS ALT2 TSL 1 (best) BASIC21.59■■□□□ 1.05
NR1H2P55055 CSNK1G2-201ENST00000255641 2918 ntAPPRIS P1 TSL 1 (best) BASIC21.59■■□□□ 1.05
NR1H2P55055 AC107214.1-201ENST00000457303 559 ntTSL 1 (best) BASIC21.58■■□□□ 1.05
NR1H2P55055 GNPTG-204ENST00000527137 386 ntTSL 2 BASIC21.58■■□□□ 1.05
NR1H2P55055 PDK1-202ENST00000392571 1515 ntAPPRIS ALT2 TSL 1 (best) BASIC21.58■■□□□ 1.04
NR1H2P55055 ICAM5-201ENST00000221980 3000 ntAPPRIS P1 TSL 1 (best) BASIC21.58■■□□□ 1.04
NR1H2P55055 TAZ-216ENST00000613002 1485 ntTSL 1 (best) BASIC21.58■■□□□ 1.04
NR1H2P55055 PRODH-203ENST00000357068 2462 ntAPPRIS P3 TSL 1 (best) BASIC21.57■■□□□ 1.04
NR1H2P55055 RAD51-208ENST00000532743 1515 ntTSL 2 BASIC21.57■■□□□ 1.04
NR1H2P55055 TTC36-201ENST00000302783 874 ntAPPRIS P1 TSL 1 (best) BASIC21.57■■□□□ 1.04
NR1H2P55055 ENHO-201ENST00000399775 1082 ntAPPRIS P1 TSL 2 BASIC21.57■■□□□ 1.04
NR1H2P55055 ARL6IP4-208ENST00000439686 796 ntAPPRIS ALT2 TSL 3 BASIC21.57■■□□□ 1.04
NR1H2P55055 FAM222B-205ENST00000577682 549 ntTSL 4 BASIC21.57■■□□□ 1.04
NR1H2P55055 LINC00526-201ENST00000581067 1875 ntBASIC21.57■■□□□ 1.04
NR1H2P55055 ATP13A2-215ENST00000617114 1723 ntTSL 5 BASIC21.57■■□□□ 1.04
NR1H2P55055 DENND1B-204ENST00000367396 2177 ntAPPRIS P3 TSL 1 (best) BASIC21.57■■□□□ 1.04
NR1H2P55055 RDH14-201ENST00000381249 1587 ntAPPRIS P1 TSL 1 (best) BASIC21.57■■□□□ 1.04
NR1H2P55055 ARHGAP29-202ENST00000370217 2043 ntTSL 1 (best) BASIC21.56■■□□□ 1.04
NR1H2P55055 SRPK3-204ENST00000370108 1863 ntAPPRIS ALT2 TSL 5 BASIC21.56■■□□□ 1.04
NR1H2P55055 PKMYT1-211ENST00000573944 1891 ntAPPRIS P1 TSL 5 BASIC21.56■■□□□ 1.04
NR1H2P55055 CREG1-201ENST00000370509 1974 ntAPPRIS P1 TSL 1 (best) BASIC21.56■■□□□ 1.04
NR1H2P55055 PTPRM-211ENST00000580170 5941 ntAPPRIS ALT2 TSL 1 (best) BASIC21.56■■□□□ 1.04
NR1H2P55055 CAMK1D-203ENST00000615792 1725 ntTSL 5 BASIC21.56■■□□□ 1.04
NR1H2P55055 FLVCR1-AS1-203ENST00000426161 892 ntTSL 1 (best) BASIC21.56■■□□□ 1.04
NR1H2P55055 QDPR-208ENST00000513615 1188 ntTSL 2 BASIC21.56■■□□□ 1.04
NR1H2P55055 IRX4-201ENST00000231357 2221 ntAPPRIS P1 TSL 1 (best) BASIC21.56■■□□□ 1.04
NR1H2P55055 AMZ2P1-201ENST00000397713 2259 ntTSL 1 (best) BASIC21.55■■□□□ 1.04
NR1H2P55055 IFNL4-201ENST00000606380 1637 ntAPPRIS P5 TSL 1 (best) BASIC21.55■■□□□ 1.04
NR1H2P55055 CRHR1-201ENST00000293493 2621 ntTSL 5 BASIC21.55■■□□□ 1.04
NR1H2P55055 ATP5G2P3-201ENST00000429083 425 ntBASIC21.55■■□□□ 1.04
NR1H2P55055 FGF20-201ENST00000180166 1688 ntAPPRIS P1 TSL 1 (best) BASIC21.55■■□□□ 1.04
NR1H2P55055 TMEM9B-205ENST00000534025 2083 ntAPPRIS P1 TSL 1 (best) BASIC21.55■■□□□ 1.04
NR1H2P55055 TSPAN17-207ENST00000508164 2457 ntTSL 1 (best) BASIC21.54■■□□□ 1.04
NR1H2P55055 OXLD1-201ENST00000374741 620 ntAPPRIS P1 TSL 1 (best) BASIC21.54■■□□□ 1.04
NR1H2P55055 AC004987.1-201ENST00000428627 508 ntBASIC21.54■■□□□ 1.04
NR1H2P55055 GFER-205ENST00000569451 517 ntTSL 5 BASIC21.54■■□□□ 1.04
NR1H2P55055 CCND3-205ENST00000415497 1843 ntTSL 2 BASIC21.54■■□□□ 1.04
NR1H2P55055 SHD-204ENST00000599689 1729 ntTSL 5 BASIC21.54■■□□□ 1.04
NR1H2P55055 FBXO25-203ENST00000352684 2360 ntTSL 5 BASIC21.54■■□□□ 1.04
NR1H2P55055 SLC25A24-204ENST00000569674 2357 ntBASIC21.54■■□□□ 1.04
NR1H2P55055 RANBP10-202ENST00000448631 2232 ntTSL 2 BASIC21.53■■□□□ 1.04
NR1H2P55055 CACNB3-205ENST00000547392 2237 ntTSL 5 BASIC21.53■■□□□ 1.04
NR1H2P55055 PLK5-202ENST00000454744 1930 ntAPPRIS P2 TSL 2 BASIC21.53■■□□□ 1.04
NR1H2P55055 TMIE-201ENST00000326431 1824 ntAPPRIS P1 TSL 1 (best) BASIC21.53■■□□□ 1.04
NR1H2P55055 UBE2D2-205ENST00000505548 1113 ntTSL 1 (best) BASIC21.53■■□□□ 1.04
NR1H2P55055 PITX3-202ENST00000539804 1187 ntAPPRIS P1 TSL 5 BASIC21.53■■□□□ 1.04
NR1H2P55055 HOMER3-207ENST00000594794 903 ntTSL 5 BASIC21.53■■□□□ 1.04
NR1H2P55055 C21orf2-203ENST00000397956 1634 ntAPPRIS ALT2 TSL 1 (best) BASIC21.53■■□□□ 1.04
NR1H2P55055 PRKACA-201ENST00000308677 2677 ntAPPRIS P1 TSL 1 (best) BASIC21.53■■□□□ 1.04
NR1H2P55055 ANKRD28-201ENST00000399451 6564 ntAPPRIS P1 TSL 1 (best) BASIC21.53■■□□□ 1.04
NR1H2P55055 CACNA1H-202ENST00000358590 8069 ntAPPRIS ALT2 TSL 5 BASIC21.53■■□□□ 1.04
NR1H2P55055 AC007375.3-201ENST00000600936 2314 ntBASIC21.52■■□□□ 1.04
NR1H2P55055 ARL2BP-201ENST00000219204 2130 ntAPPRIS P1 TSL 1 (best) BASIC21.52■■□□□ 1.04
NR1H2P55055 LINC01770-201ENST00000417917 634 ntTSL 2 BASIC21.52■■□□□ 1.04
NR1H2P55055 HES4-204ENST00000484667 667 ntTSL 3 BASIC21.52■■□□□ 1.04
NR1H2P55055 ACOT1-202ENST00000557556 1271 ntTSL 1 (best) BASIC21.52■■□□□ 1.04
NR1H2P55055 RAB4B-203ENST00000594800 1173 ntAPPRIS P1 TSL 5 BASIC21.52■■□□□ 1.04
NR1H2P55055 AC133552.2-201ENST00000619106 1032 ntBASIC21.52■■□□□ 1.04
NR1H2P55055 DHH-201ENST00000266991 1936 ntAPPRIS P1 TSL 1 (best) BASIC21.52■■□□□ 1.04
NR1H2P55055 DNAJB11-201ENST00000265028 1688 ntAPPRIS P1 TSL 1 (best) BASIC21.52■■□□□ 1.04
NR1H2P55055 CTGF-201ENST00000367976 2339 ntAPPRIS P1 TSL 1 (best) BASIC21.52■■□□□ 1.04
NR1H2P55055 GFI1-203ENST00000427103 2693 ntAPPRIS P1 TSL 1 (best) BASIC21.52■■□□□ 1.03
NR1H2P55055 DOK1-203ENST00000409429 1955 ntTSL 1 (best) BASIC21.51■■□□□ 1.03
NR1H2P55055 PPP1R14A-201ENST00000301242 777 ntAPPRIS P1 TSL 1 (best) BASIC21.51■■□□□ 1.03
NR1H2P55055 AC025884.2-201ENST00000553429 711 ntBASIC21.51■■□□□ 1.03
NR1H2P55055 SH2D3A-201ENST00000245908 2296 ntAPPRIS P1 TSL 1 (best) BASIC21.51■■□□□ 1.03
NR1H2P55055 NIPA2-203ENST00000398013 2280 ntAPPRIS P1 TSL 1 (best) BASIC21.51■■□□□ 1.03
NR1H2P55055 LDLRAD3-203ENST00000528989 1879 ntTSL 1 (best) BASIC21.51■■□□□ 1.03
NR1H2P55055 WWC2-AS2-201ENST00000578387 2183 ntBASIC21.51■■□□□ 1.03
NR1H2P55055 FRAT1-201ENST00000371021 2649 ntAPPRIS P1 BASIC21.51■■□□□ 1.03
Retrieved 100 of 98,524 protein–RNA pairs in 26.9 ms