Protein–RNA interactions for Protein: P54709

ATP1B3, Sodium/potassium-transporting ATPase subunit beta-3, humanhuman

Predictions only

Length 279 aa.

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Protein RNA Prediction (catRAPID) Interaction (ENCODE eCLIP)
Gene UniProt Accession Transcript Symbol Ensembl Transcript ID Length Transcript Status Prediction Score Prediction z-Score p-Value Fold Change
ATP1B3P54709 KAT5-208ENST00000530446 1697 ntTSL 1 (best) BASIC19.84■□□□□ 0.77
ATP1B3P54709 MED22-201ENST00000343730 1437 ntAPPRIS P4 TSL 1 (best) BASIC19.84■□□□□ 0.77
ATP1B3P54709 BAZ1A-201ENST00000358716 5920 ntTSL 1 (best) BASIC19.84■□□□□ 0.77
ATP1B3P54709 PPP1CC-206ENST00000550991 1882 ntTSL 2 BASIC19.84■□□□□ 0.77
ATP1B3P54709 HOMER3-201ENST00000221222 1384 ntAPPRIS ALT1 TSL 5 BASIC19.83■□□□□ 0.77
ATP1B3P54709 AC099805.1-201ENST00000523987 1797 ntTSL 1 (best) BASIC19.83■□□□□ 0.77
ATP1B3P54709 HOXA10-206ENST00000613671 2175 ntTSL 5 BASIC19.83■□□□□ 0.77
ATP1B3P54709 CKB-201ENST00000348956 1709 ntAPPRIS P1 TSL 1 (best) BASIC19.83■□□□□ 0.77
ATP1B3P54709 CAMK2N1-201ENST00000375078 2336 ntAPPRIS P1 TSL 1 (best) BASIC19.83■□□□□ 0.76
ATP1B3P54709 CDR2-201ENST00000268383 2702 ntAPPRIS P1 TSL 1 (best) BASIC19.83■□□□□ 0.76
ATP1B3P54709 PPM1J-201ENST00000309276 1863 ntAPPRIS P1 TSL 1 (best) BASIC19.83■□□□□ 0.76
ATP1B3P54709 SLC39A4-202ENST00000301305 2174 ntAPPRIS P1 TSL 1 (best) BASIC19.83■□□□□ 0.76
ATP1B3P54709 SLC9A3-203ENST00000514375 2504 ntAPPRIS ALT2 TSL 1 (best) BASIC19.82■□□□□ 0.76
ATP1B3P54709 ARX-201ENST00000379044 2876 ntAPPRIS P1 TSL 1 (best) BASIC19.82■□□□□ 0.76
ATP1B3P54709 ADPRHL2-201ENST00000373178 1668 ntAPPRIS P1 TSL 1 (best) BASIC19.82■□□□□ 0.76
ATP1B3P54709 HTATSF1-201ENST00000218364 2775 ntAPPRIS P1 TSL 1 (best) BASIC19.82■□□□□ 0.76
ATP1B3P54709 HADH-209ENST00000603302 2032 ntTSL 1 (best) BASIC19.82■□□□□ 0.76
ATP1B3P54709 LMAN2-208ENST00000515209 1149 ntAPPRIS ALT2 TSL 3 BASIC19.82■□□□□ 0.76
ATP1B3P54709 HOXA10-201ENST00000283921 2541 ntAPPRIS P2 TSL 1 (best) BASIC19.82■□□□□ 0.76
ATP1B3P54709 KIF2A-202ENST00000401507 2539 ntAPPRIS P1 TSL 1 (best) BASIC19.82■□□□□ 0.76
ATP1B3P54709 NKX2-3-202ENST00000622383 1986 ntTSL 5 BASIC19.82■□□□□ 0.76
ATP1B3P54709 SHISA8-202ENST00000621082 1405 ntAPPRIS P2 TSL 5 BASIC19.82■□□□□ 0.76
ATP1B3P54709 POLE2-201ENST00000216367 1776 ntAPPRIS P1 TSL 1 (best) BASIC19.82■□□□□ 0.76
ATP1B3P54709 FKBP8-209ENST00000597960 1781 ntAPPRIS P3 TSL 5 BASIC19.82■□□□□ 0.76
ATP1B3P54709 ZNF205-201ENST00000219091 1947 ntAPPRIS P1 TSL 5 BASIC19.82■□□□□ 0.76
ATP1B3P54709 VDAC2-203ENST00000332211 1557 ntAPPRIS P1 TSL 1 (best) BASIC19.82■□□□□ 0.76
ATP1B3P54709 AMZ2P1-201ENST00000397713 2259 ntTSL 1 (best) BASIC19.82■□□□□ 0.76
ATP1B3P54709 CLDND1-202ENST00000394180 2228 ntAPPRIS P1 TSL 1 (best) BASIC19.82■□□□□ 0.76
ATP1B3P54709 ARFIP2-202ENST00000396777 1868 ntAPPRIS P1 TSL 2 BASIC19.82■□□□□ 0.76
ATP1B3P54709 NR6A1-201ENST00000344523 1846 ntAPPRIS ALT2 TSL 5 BASIC19.81■□□□□ 0.76
ATP1B3P54709 CNN3-202ENST00000394202 1974 ntTSL 2 BASIC19.81■□□□□ 0.76
ATP1B3P54709 NAPRT-204ENST00000449291 1965 ntAPPRIS P1 TSL 1 (best) BASIC19.81■□□□□ 0.76
ATP1B3P54709 MATK-204ENST00000585778 1994 ntAPPRIS ALT2 TSL 1 (best) BASIC19.81■□□□□ 0.76
ATP1B3P54709 PSPH-201ENST00000275605 2131 ntAPPRIS P1 TSL 1 (best) BASIC19.81■□□□□ 0.76
ATP1B3P54709 LRRC73-201ENST00000372441 2121 ntAPPRIS P1 TSL 1 (best) BASIC19.81■□□□□ 0.76
ATP1B3P54709 RSPO4-202ENST00000400634 722 ntTSL 1 (best) BASIC19.81■□□□□ 0.76
ATP1B3P54709 AL590677.1-201ENST00000438431 380 ntTSL 5 BASIC19.81■□□□□ 0.76
ATP1B3P54709 HYI-210ENST00000486909 905 ntTSL 5 BASIC19.81■□□□□ 0.76
ATP1B3P54709 AMZ2-202ENST00000359904 2402 ntAPPRIS P1 TSL 2 BASIC19.81■□□□□ 0.76
ATP1B3P54709 PTPRJ-201ENST00000418331 5122 ntAPPRIS P2 TSL 1 (best) BASIC19.81■□□□□ 0.76
ATP1B3P54709 RNF223-201ENST00000453464 1902 ntAPPRIS P1 TSL 2 BASIC19.8■□□□□ 0.76
ATP1B3P54709 ABCB10P4-201ENST00000566803 2184 ntBASIC19.8■□□□□ 0.76
ATP1B3P54709 CSNK1G3-207ENST00000512718 1569 ntTSL 2 BASIC19.8■□□□□ 0.76
ATP1B3P54709 AC104002.3-202ENST00000557170 1100 ntTSL 3 BASIC19.8■□□□□ 0.76
ATP1B3P54709 AC129492.7-201ENST00000622992 756 ntBASIC19.8■□□□□ 0.76
ATP1B3P54709 FAHD1-203ENST00000427358 1974 ntAPPRIS P1 BASIC19.8■□□□□ 0.76
ATP1B3P54709 CHODL-201ENST00000299295 2548 ntAPPRIS P1 TSL 1 (best) BASIC19.8■□□□□ 0.76
ATP1B3P54709 IRX5-201ENST00000320990 2061 ntAPPRIS ALT1 TSL 1 (best) BASIC19.8■□□□□ 0.76
ATP1B3P54709 FAM83F-202ENST00000473717 1917 ntTSL 1 (best) BASIC19.8■□□□□ 0.76
ATP1B3P54709 PDIA6-207ENST00000540494 2509 ntAPPRIS ALT1 TSL 2 BASIC19.79■□□□□ 0.76
ATP1B3P54709 SNX18-201ENST00000326277 2063 ntTSL 2 BASIC19.79■□□□□ 0.76
ATP1B3P54709 IFI30-201ENST00000407280 1134 ntAPPRIS P1 TSL 1 (best) BASIC19.79■□□□□ 0.76
ATP1B3P54709 ASAP2-201ENST00000281419 5712 ntAPPRIS P3 TSL 1 (best) BASIC19.79■□□□□ 0.76
ATP1B3P54709 CDIPT-201ENST00000219789 2353 ntAPPRIS P1 TSL 1 (best) BASIC19.79■□□□□ 0.76
ATP1B3P54709 BFSP1-202ENST00000377873 2207 ntAPPRIS P1 TSL 1 (best) BASIC19.79■□□□□ 0.76
ATP1B3P54709 EIF5A-211ENST00000576930 1439 ntAPPRIS P1 TSL 5 BASIC19.78■□□□□ 0.76
ATP1B3P54709 MROH6-202ENST00000524906 1794 ntAPPRIS ALT2 TSL 3 BASIC19.78■□□□□ 0.76
ATP1B3P54709 U2AF2-202ENST00000450554 3022 ntAPPRIS ALT1 TSL 1 (best) BASIC19.78■□□□□ 0.76
ATP1B3P54709 AC007383.2-202ENST00000435627 482 ntTSL 2 BASIC19.78■□□□□ 0.76
ATP1B3P54709 DUSP8P5-201ENST00000422884 1815 ntBASIC19.78■□□□□ 0.76
ATP1B3P54709 NFU1-203ENST00000410022 1467 ntAPPRIS P3 TSL 1 (best) BASIC19.78■□□□□ 0.76
ATP1B3P54709 USP12-201ENST00000282344 4511 ntAPPRIS P1 TSL 1 (best) BASIC19.77■□□□□ 0.76
ATP1B3P54709 SLC30A2-201ENST00000374276 2494 ntAPPRIS P1 TSL 1 (best) BASIC19.77■□□□□ 0.76
ATP1B3P54709 LONRF2P2-201ENST00000439212 571 ntBASIC19.77■□□□□ 0.76
ATP1B3P54709 PSMG4-207ENST00000451246 824 ntTSL 3 BASIC19.77■□□□□ 0.76
ATP1B3P54709 KCNAB3-201ENST00000303790 2458 ntAPPRIS P1 TSL 1 (best) BASIC19.77■□□□□ 0.75
ATP1B3P54709 HHEX-201ENST00000282728 1727 ntAPPRIS P1 TSL 1 (best) BASIC19.76■□□□□ 0.75
ATP1B3P54709 MYBL2-201ENST00000217026 2639 ntAPPRIS P1 TSL 1 (best) BASIC19.76■□□□□ 0.75
ATP1B3P54709 CACNA1H-202ENST00000358590 8069 ntAPPRIS ALT2 TSL 5 BASIC19.76■□□□□ 0.75
ATP1B3P54709 SLC25A42-201ENST00000318596 3120 ntAPPRIS P1 TSL 1 (best) BASIC19.76■□□□□ 0.75
ATP1B3P54709 SLC19A1-202ENST00000380010 1884 ntAPPRIS ALT2 TSL 1 (best) BASIC19.76■□□□□ 0.75
ATP1B3P54709 HSPBP1-202ENST00000433386 1572 ntAPPRIS P1 TSL 1 (best) BASIC19.76■□□□□ 0.75
ATP1B3P54709 GADD45A-202ENST00000370986 1496 ntAPPRIS P1 TSL 1 (best) BASIC19.76■□□□□ 0.75
ATP1B3P54709 MYDGF-201ENST00000262947 1018 ntAPPRIS P1 TSL 1 (best) BASIC19.76■□□□□ 0.75
ATP1B3P54709 KRT18P60-201ENST00000312876 1297 ntBASIC19.76■□□□□ 0.75
ATP1B3P54709 TCEA1-213ENST00000640041 1171 ntTSL 5 BASIC19.76■□□□□ 0.75
ATP1B3P54709 FOXK2-201ENST00000335255 5265 ntAPPRIS P1 TSL 1 (best) BASIC19.76■□□□□ 0.75
ATP1B3P54709 USF3-203ENST00000491165 2133 ntAPPRIS ALT2 TSL 1 (best) BASIC19.76■□□□□ 0.75
ATP1B3P54709 TMUB1-203ENST00000462940 1549 ntAPPRIS P1 TSL 1 (best) BASIC19.76■□□□□ 0.75
ATP1B3P54709 BRD4-212ENST00000630599 726 ntTSL 2 BASIC19.75■□□□□ 0.75
ATP1B3P54709 ZFAND4-205ENST00000374371 2283 ntTSL 5 BASIC19.75■□□□□ 0.75
ATP1B3P54709 IL17RE-201ENST00000383814 2704 ntAPPRIS P2 TSL 1 (best) BASIC19.75■□□□□ 0.75
ATP1B3P54709 HSD11B1L-206ENST00000423665 1525 ntAPPRIS ALT2 TSL 1 (best) BASIC19.75■□□□□ 0.75
ATP1B3P54709 SLC25A1-202ENST00000451283 1514 ntTSL 2 BASIC19.75■□□□□ 0.75
ATP1B3P54709 ECE2-202ENST00000357474 2667 ntTSL 1 (best) BASIC19.75■□□□□ 0.75
ATP1B3P54709 PHACTR2-208ENST00000440869 2569 ntAPPRIS ALT2 TSL 2 BASIC19.75■□□□□ 0.75
ATP1B3P54709 KCNS1-202ENST00000537075 2136 ntAPPRIS P1 TSL 1 (best) BASIC19.75■□□□□ 0.75
ATP1B3P54709 ZNF174-202ENST00000344823 1557 ntTSL 1 (best) BASIC19.74■□□□□ 0.75
ATP1B3P54709 LDB1-201ENST00000361198 2285 ntAPPRIS P1 TSL 1 (best) BASIC19.74■□□□□ 0.75
ATP1B3P54709 ARL6IP4-210ENST00000453766 1491 ntAPPRIS ALT2 TSL 1 (best) BASIC19.74■□□□□ 0.75
ATP1B3P54709 H2AFY-217ENST00000511689 2789 ntAPPRIS P4 TSL 1 (best) BASIC19.74■□□□□ 0.75
ATP1B3P54709 AL354928.1-201ENST00000438380 617 ntTSL 2 BASIC19.74■□□□□ 0.75
ATP1B3P54709 TRIM52-AS1-202ENST00000507434 672 ntTSL 1 (best) BASIC19.74■□□□□ 0.75
ATP1B3P54709 KCNK13-201ENST00000282146 2522 ntAPPRIS P1 TSL 1 (best) BASIC19.74■□□□□ 0.75
ATP1B3P54709 GNG4-203ENST00000391854 5104 ntAPPRIS P1 TSL 1 (best) BASIC19.74■□□□□ 0.75
ATP1B3P54709 SLIT1-203ENST00000371041 1695 ntTSL 2 BASIC19.74■□□□□ 0.75
ATP1B3P54709 TATDN2-201ENST00000287652 5342 ntAPPRIS P1 TSL 1 (best) BASIC19.73■□□□□ 0.75
ATP1B3P54709 OSCAR-205ENST00000359649 1892 ntAPPRIS P4 TSL 2 BASIC19.73■□□□□ 0.75
ATP1B3P54709 ASRGL1-202ENST00000415229 2270 ntAPPRIS P1 TSL 1 (best) BASIC19.73■□□□□ 0.75
ATP1B3P54709 RUNDC3A-202ENST00000426726 2048 ntAPPRIS P1 TSL 1 (best) BASIC19.73■□□□□ 0.75
Retrieved 100 of 98,524 protein–RNA pairs in 14 ms