Protein–RNA interactions for Protein: P40198

CEACAM3, Carcinoembryonic antigen-related cell adhesion molecule 3, humanhuman

Predictions only

Length 252 aa.

Download Table  
Protein RNA Prediction (catRAPID) Interaction (ENCODE eCLIP)
Gene UniProt Accession Transcript Symbol Ensembl Transcript ID Length Transcript Status Prediction Score Prediction z-Score p-Value Fold Change
CEACAM3P40198 PHF11-202ENST00000378319 1359 ntAPPRIS P3 TSL 1 (best) BASIC18.69■□□□□ 0.58
CEACAM3P40198 AL139125.2-201ENST00000623134 1869 ntBASIC18.69■□□□□ 0.58
CEACAM3P40198 VAV3-202ENST00000370056 4990 ntAPPRIS P1 TSL 1 (best) BASIC18.69■□□□□ 0.58
CEACAM3P40198 NUDT18-202ENST00000613958 1754 ntTSL 2 BASIC18.69■□□□□ 0.58
CEACAM3P40198 EVA1B-201ENST00000270824 1054 ntAPPRIS P1 TSL 2 BASIC18.69■□□□□ 0.58
CEACAM3P40198 ZFAND5-202ENST00000343431 1073 ntAPPRIS P1 TSL 5 BASIC18.69■□□□□ 0.58
CEACAM3P40198 MDK-203ENST00000395566 828 ntAPPRIS P2 TSL 1 (best) BASIC18.69■□□□□ 0.58
CEACAM3P40198 RPL31-208ENST00000409733 825 ntAPPRIS P3 TSL 1 (best) BASIC18.69■□□□□ 0.58
CEACAM3P40198 AC239859.2-201ENST00000444165 318 ntBASIC18.69■□□□□ 0.58
CEACAM3P40198 AC026785.2-201ENST00000511821 867 ntTSL 2 BASIC18.69■□□□□ 0.58
CEACAM3P40198 LINC02043-201ENST00000419745 1832 ntTSL 2 BASIC18.69■□□□□ 0.58
CEACAM3P40198 DOK3-205ENST00000501403 1872 ntAPPRIS P1 TSL 5 BASIC18.69■□□□□ 0.58
CEACAM3P40198 ESR2-202ENST00000341099 2060 ntAPPRIS P1 TSL 1 (best) BASIC18.69■□□□□ 0.58
CEACAM3P40198 GOLGA7-201ENST00000357743 2027 ntAPPRIS P1 TSL 1 (best) BASIC18.68■□□□□ 0.58
CEACAM3P40198 MIR4787-201ENST00000607364 84 ntBASIC18.68■□□□□ 0.58
CEACAM3P40198 TATDN2-201ENST00000287652 5342 ntAPPRIS P1 TSL 1 (best) BASIC18.68■□□□□ 0.58
CEACAM3P40198 LINC01124-201ENST00000409786 2117 ntBASIC18.68■□□□□ 0.58
CEACAM3P40198 RNF40-201ENST00000324685 5634 ntAPPRIS P1 TSL 1 (best) BASIC18.68■□□□□ 0.58
CEACAM3P40198 AZIN2-201ENST00000294517 2182 ntAPPRIS P1 TSL 1 (best) BASIC18.68■□□□□ 0.58
CEACAM3P40198 UPF1-207ENST00000599848 5311 ntTSL 1 (best) BASIC18.68■□□□□ 0.58
CEACAM3P40198 GP1BB-201ENST00000366425 1553 ntAPPRIS P1 TSL 1 (best) BASIC18.68■□□□□ 0.58
CEACAM3P40198 FUT11-201ENST00000372841 2056 ntAPPRIS P1 TSL 1 (best) BASIC18.67■□□□□ 0.58
CEACAM3P40198 ZNF205-202ENST00000382192 2062 ntAPPRIS P1 TSL 1 (best) BASIC18.67■□□□□ 0.58
CEACAM3P40198 AP000802.1-201ENST00000500537 1934 ntTSL 1 (best) BASIC18.67■□□□□ 0.58
CEACAM3P40198 GUCD1-202ENST00000402766 865 ntTSL 2 BASIC18.67■□□□□ 0.58
CEACAM3P40198 DUSP22-214ENST00000605315 867 ntTSL 5 BASIC18.67■□□□□ 0.58
CEACAM3P40198 CDH23-206ENST00000398842 1759 ntTSL 5 BASIC18.67■□□□□ 0.58
CEACAM3P40198 ITM2C-203ENST00000335005 1889 ntTSL 1 (best) BASIC18.67■□□□□ 0.58
CEACAM3P40198 FAM107A-203ENST00000447756 1432 ntTSL 1 (best) BASIC18.66■□□□□ 0.58
CEACAM3P40198 KCTD5-201ENST00000301738 2482 ntAPPRIS P1 TSL 1 (best) BASIC18.66■□□□□ 0.58
CEACAM3P40198 ETS1-201ENST00000319397 2231 ntAPPRIS P1 TSL 1 (best) BASIC18.66■□□□□ 0.58
CEACAM3P40198 TSEN34-201ENST00000302937 2294 ntAPPRIS P1 TSL 1 (best) BASIC18.66■□□□□ 0.58
CEACAM3P40198 BIN1-210ENST00000393041 2272 ntTSL 1 (best) BASIC18.66■□□□□ 0.58
CEACAM3P40198 IKBKG-211ENST00000615874 1460 ntTSL 5 BASIC18.66■□□□□ 0.58
CEACAM3P40198 IKBKG-215ENST00000619941 1463 ntTSL 5 BASIC18.66■□□□□ 0.58
CEACAM3P40198 LINC00543-201ENST00000567234 1845 ntBASIC18.66■□□□□ 0.58
CEACAM3P40198 HES6-204ENST00000409182 863 ntTSL 2 BASIC18.66■□□□□ 0.58
CEACAM3P40198 TRIR-205ENST00000592273 783 ntTSL 3 BASIC18.66■□□□□ 0.58
CEACAM3P40198 ZNF174-202ENST00000344823 1557 ntTSL 1 (best) BASIC18.66■□□□□ 0.58
CEACAM3P40198 CD37-213ENST00000598095 1598 ntTSL 2 BASIC18.66■□□□□ 0.58
CEACAM3P40198 TBL2-222ENST00000610724 2165 ntTSL 5 BASIC18.66■□□□□ 0.58
CEACAM3P40198 PKIG-206ENST00000372892 1338 ntAPPRIS P1 TSL 2 BASIC18.66■□□□□ 0.58
CEACAM3P40198 SLBP-206ENST00000489418 1977 ntAPPRIS P2 TSL 1 (best) BASIC18.66■□□□□ 0.58
CEACAM3P40198 TMUB1-201ENST00000297533 1353 ntAPPRIS P1 TSL 1 (best) BASIC18.66■□□□□ 0.58
CEACAM3P40198 CPSF4-204ENST00000436336 1738 ntAPPRIS ALT1 TSL 1 (best) BASIC18.66■□□□□ 0.58
CEACAM3P40198 PIP5K1C-203ENST00000539785 2289 ntAPPRIS ALT2 TSL 2 BASIC18.65■□□□□ 0.58
CEACAM3P40198 BAZ1A-201ENST00000358716 5920 ntTSL 1 (best) BASIC18.65■□□□□ 0.58
CEACAM3P40198 MRPS34-202ENST00000397375 1024 ntAPPRIS P1 TSL 1 (best) BASIC18.65■□□□□ 0.58
CEACAM3P40198 AC005551.1-201ENST00000641816 493 ntAPPRIS P1 BASIC18.65■□□□□ 0.58
CEACAM3P40198 SLC35A2-201ENST00000247138 1672 ntAPPRIS P3 TSL 1 (best) BASIC18.65■□□□□ 0.58
CEACAM3P40198 DAZAP1-205ENST00000587079 2086 ntAPPRIS ALT1 TSL 5 BASIC18.65■□□□□ 0.58
CEACAM3P40198 MAP2K2-201ENST00000262948 1734 ntAPPRIS P1 TSL 1 (best) BASIC18.65■□□□□ 0.58
CEACAM3P40198 ADIPOR1-201ENST00000340990 2177 ntAPPRIS P1 TSL 1 (best) BASIC18.65■□□□□ 0.58
CEACAM3P40198 CUEDC1-202ENST00000407144 2190 ntAPPRIS P1 TSL 5 BASIC18.65■□□□□ 0.58
CEACAM3P40198 DACT1-206ENST00000556859 2239 ntAPPRIS ALT2 TSL 2 BASIC18.65■□□□□ 0.58
CEACAM3P40198 ADSSL1-202ENST00000332972 1969 ntTSL 1 (best) BASIC18.64■□□□□ 0.58
CEACAM3P40198 HSPBP1-202ENST00000433386 1572 ntAPPRIS P1 TSL 1 (best) BASIC18.64■□□□□ 0.58
CEACAM3P40198 MCRIP1-202ENST00000457257 942 ntTSL 3 BASIC18.64■□□□□ 0.57
CEACAM3P40198 AC004448.1-201ENST00000458332 883 ntBASIC18.64■□□□□ 0.57
CEACAM3P40198 AC092028.1-203ENST00000608262 953 ntBASIC18.64■□□□□ 0.57
CEACAM3P40198 PLEKHA8-202ENST00000396257 1907 ntTSL 1 (best) BASIC18.64■□□□□ 0.57
CEACAM3P40198 CAMK1-201ENST00000256460 1488 ntAPPRIS P1 TSL 1 (best) BASIC18.64■□□□□ 0.57
CEACAM3P40198 AUH-201ENST00000303617 1490 ntTSL 1 (best) BASIC18.64■□□□□ 0.57
CEACAM3P40198 NEURL4-201ENST00000315614 5182 ntAPPRIS ALT2 TSL 1 (best) BASIC18.64■□□□□ 0.57
CEACAM3P40198 DDX42-201ENST00000359353 2783 ntTSL 5 BASIC18.64■□□□□ 0.57
CEACAM3P40198 PRR35-201ENST00000409413 2216 ntAPPRIS P1 TSL 1 (best) BASIC18.64■□□□□ 0.57
CEACAM3P40198 SLC30A3-201ENST00000233535 2260 ntAPPRIS P1 TSL 1 (best) BASIC18.63■□□□□ 0.57
CEACAM3P40198 CACNG6-203ENST00000352529 1635 ntTSL 5 BASIC18.63■□□□□ 0.57
CEACAM3P40198 ZKSCAN7-206ENST00000431636 1692 ntTSL 1 (best) BASIC18.63■□□□□ 0.57
CEACAM3P40198 OSCAR-205ENST00000359649 1892 ntAPPRIS P4 TSL 2 BASIC18.63■□□□□ 0.57
CEACAM3P40198 MDK-202ENST00000395565 951 ntAPPRIS P2 TSL 2 BASIC18.63■□□□□ 0.57
CEACAM3P40198 AC131274.2-201ENST00000580697 1507 ntBASIC18.63■□□□□ 0.57
CEACAM3P40198 CACNG8-201ENST00000270458 8747 ntAPPRIS ALT2 TSL 1 (best) BASIC18.63■□□□□ 0.57
CEACAM3P40198 FKBP8-209ENST00000597960 1781 ntAPPRIS P3 TSL 5 BASIC18.63■□□□□ 0.57
CEACAM3P40198 CBWD2-201ENST00000259199 1812 ntAPPRIS P3 TSL 1 (best) BASIC18.63■□□□□ 0.57
CEACAM3P40198 FAHD1-203ENST00000427358 1974 ntAPPRIS P1 BASIC18.62■□□□□ 0.57
CEACAM3P40198 SYNGR3-201ENST00000248121 2051 ntAPPRIS P1 TSL 1 (best) BASIC18.62■□□□□ 0.57
CEACAM3P40198 PKM-204ENST00000449901 2526 ntTSL 2 BASIC18.62■□□□□ 0.57
CEACAM3P40198 FANCE-201ENST00000229769 2554 ntAPPRIS P1 TSL 1 (best) BASIC18.62■□□□□ 0.57
CEACAM3P40198 FEZ1-202ENST00000366139 1053 ntTSL 2 BASIC18.62■□□□□ 0.57
CEACAM3P40198 MAGI2-AS3-201ENST00000414797 1072 ntTSL 2 BASIC18.62■□□□□ 0.57
CEACAM3P40198 NAA30-203ENST00000555166 1294 ntAPPRIS ALT2 TSL 2 BASIC18.62■□□□□ 0.57
CEACAM3P40198 TMEM170A-206ENST00000569276 609 ntTSL 2 BASIC18.62■□□□□ 0.57
CEACAM3P40198 PRMT5-228ENST00000627278 129 ntTSL 5 BASIC18.62■□□□□ 0.57
CEACAM3P40198 RBFOX1-206ENST00000535565 1599 ntTSL 2 BASIC18.62■□□□□ 0.57
CEACAM3P40198 SUGCT-201ENST00000335693 1645 ntAPPRIS ALT2 TSL 1 (best) BASIC18.62■□□□□ 0.57
CEACAM3P40198 C7orf25-205ENST00000438029 1743 ntAPPRIS P1 TSL 2 BASIC18.62■□□□□ 0.57
CEACAM3P40198 LRRC24-202ENST00000533758 1701 ntAPPRIS ALT2 TSL 5 BASIC18.62■□□□□ 0.57
CEACAM3P40198 R3HDM4-203ENST00000587975 1765 ntTSL 3 BASIC18.62■□□□□ 0.57
CEACAM3P40198 TANGO2-207ENST00000420290 1859 ntTSL 2 BASIC18.62■□□□□ 0.57
CEACAM3P40198 ZFYVE28-202ENST00000503000 1874 ntTSL 1 (best) BASIC18.62■□□□□ 0.57
CEACAM3P40198 GTF2IP1-204ENST00000616377 2632 ntTSL 2 BASIC18.62■□□□□ 0.57
CEACAM3P40198 TMEM202-AS1-202ENST00000565181 2325 ntBASIC18.61■□□□□ 0.57
CEACAM3P40198 RUNX2-210ENST00000576263 2256 ntTSL 5 BASIC18.61■□□□□ 0.57
CEACAM3P40198 GNPTG-201ENST00000204679 1983 ntAPPRIS P1 TSL 1 (best) BASIC18.61■□□□□ 0.57
CEACAM3P40198 LTBP3-212ENST00000529189 1997 ntTSL 2 BASIC18.61■□□□□ 0.57
CEACAM3P40198 B3GNT4-201ENST00000324189 1642 ntTSL 1 (best) BASIC18.61■□□□□ 0.57
CEACAM3P40198 UBXN2A-202ENST00000404924 1557 ntAPPRIS P1 TSL 2 BASIC18.61■□□□□ 0.57
CEACAM3P40198 TRIM72-202ENST00000613872 1573 ntTSL 1 (best) BASIC18.61■□□□□ 0.57
CEACAM3P40198 HSD11B1L-206ENST00000423665 1525 ntAPPRIS ALT2 TSL 1 (best) BASIC18.61■□□□□ 0.57
Retrieved 100 of 98,524 protein–RNA pairs in 17.5 ms