Protein–RNA interactions for Protein: O75346

ZNF253, Zinc finger protein 253, humanhuman

Predictions only

Length 499 aa.

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Protein RNA Prediction (catRAPID) Interaction (ENCODE eCLIP)
Gene UniProt Accession Transcript Symbol Ensembl Transcript ID Length Transcript Status Prediction Score Prediction z-Score p-Value Fold Change
ZNF253O75346 AC093536.1-201ENST00000569153 554 ntBASIC17.77■□□□□ 0.44
ZNF253O75346 GFER-205ENST00000569451 517 ntTSL 5 BASIC17.77■□□□□ 0.44
ZNF253O75346 PRMT5-213ENST00000553897 1857 ntTSL 2 BASIC17.77■□□□□ 0.43
ZNF253O75346 BEST2-204ENST00000553030 2000 ntAPPRIS P1 TSL 5 BASIC17.77■□□□□ 0.43
ZNF253O75346 KEAP1-202ENST00000393623 2648 ntAPPRIS P1 TSL 1 (best) BASIC17.77■□□□□ 0.43
ZNF253O75346 LDHB-203ENST00000396076 1538 ntAPPRIS P1 TSL 5 BASIC17.77■□□□□ 0.43
ZNF253O75346 YWHAH-201ENST00000248975 1825 ntAPPRIS P1 TSL 1 (best) BASIC17.77■□□□□ 0.43
ZNF253O75346 ZNF746-203ENST00000461958 5051 ntTSL 1 (best) BASIC17.76■□□□□ 0.43
ZNF253O75346 ELL3-201ENST00000319359 2352 ntAPPRIS P1 TSL 1 (best) BASIC17.76■□□□□ 0.43
ZNF253O75346 CPSF4-207ENST00000451876 1644 ntTSL 5 BASIC17.76■□□□□ 0.43
ZNF253O75346 KCNJ12-202ENST00000583088 5425 ntAPPRIS P1 TSL 1 (best) BASIC17.76■□□□□ 0.43
ZNF253O75346 ARG2-201ENST00000261783 2045 ntAPPRIS P1 TSL 1 (best) BASIC17.76■□□□□ 0.43
ZNF253O75346 CTSF-201ENST00000310325 2035 ntAPPRIS P1 TSL 1 (best) BASIC17.76■□□□□ 0.43
ZNF253O75346 TMEM51-205ENST00000434578 1861 ntTSL 1 (best) BASIC17.76■□□□□ 0.43
ZNF253O75346 MGEA5-205ENST00000439817 5043 ntTSL 5 BASIC17.76■□□□□ 0.43
ZNF253O75346 LOR-201ENST00000368742 1230 ntAPPRIS P1 TSL 1 (best) BASIC17.76■□□□□ 0.43
ZNF253O75346 UBE2S-201ENST00000264552 2548 ntAPPRIS P1 TSL 1 (best) BASIC17.76■□□□□ 0.43
ZNF253O75346 SLC22A23-205ENST00000436008 6641 ntAPPRIS ALT2 TSL 5 BASIC17.76■□□□□ 0.43
ZNF253O75346 LHX2-201ENST00000373615 2554 ntAPPRIS P1 TSL 1 (best) BASIC17.76■□□□□ 0.43
ZNF253O75346 PITX2-209ENST00000557119 1889 ntTSL 2 BASIC17.75■□□□□ 0.43
ZNF253O75346 GNPTG-201ENST00000204679 1983 ntAPPRIS P1 TSL 1 (best) BASIC17.75■□□□□ 0.43
ZNF253O75346 RBFA-201ENST00000262197 1219 ntTSL 1 (best) BASIC17.75■□□□□ 0.43
ZNF253O75346 MAPK9-203ENST00000393360 4326 ntTSL 5 BASIC17.75■□□□□ 0.43
ZNF253O75346 AC099805.1-201ENST00000523987 1797 ntTSL 1 (best) BASIC17.75■□□□□ 0.43
ZNF253O75346 C1QL2-201ENST00000272520 2043 ntAPPRIS P1 TSL 1 (best) BASIC17.75■□□□□ 0.43
ZNF253O75346 HAS1-201ENST00000222115 2087 ntAPPRIS P3 TSL 1 (best) BASIC17.75■□□□□ 0.43
ZNF253O75346 RUFY1-201ENST00000319449 2646 ntAPPRIS P3 TSL 1 (best) BASIC17.74■□□□□ 0.43
ZNF253O75346 SMURF1-202ENST00000361368 5581 ntAPPRIS P1 TSL 1 (best) BASIC17.74■□□□□ 0.43
ZNF253O75346 HOMER2-201ENST00000304231 1990 ntAPPRIS P4 TSL 5 BASIC17.74■□□□□ 0.43
ZNF253O75346 RASEF-202ENST00000376447 5576 ntAPPRIS P1 TSL 1 (best) BASIC17.74■□□□□ 0.43
ZNF253O75346 AC007029.1-201ENST00000604183 313 ntBASIC17.74■□□□□ 0.43
ZNF253O75346 SRP68-213ENST00000629930 165 ntTSL 5 BASIC17.74■□□□□ 0.43
ZNF253O75346 DACH1-201ENST00000611519 4789 ntAPPRIS ALT2 TSL 1 (best) BASIC17.74■□□□□ 0.43
ZNF253O75346 IQCD-203ENST00000546692 1872 ntTSL 5 BASIC17.73■□□□□ 0.43
ZNF253O75346 PCSK6-217ENST00000618548 4269 ntAPPRIS ALT2 TSL 1 (best) BASIC17.73■□□□□ 0.43
ZNF253O75346 DAZAP1-201ENST00000233078 2160 ntAPPRIS P2 TSL 1 (best) BASIC17.73■□□□□ 0.43
ZNF253O75346 CCND3-223ENST00000616010 2047 ntTSL 5 BASIC17.73■□□□□ 0.43
ZNF253O75346 WT1-204ENST00000448076 2114 ntAPPRIS ALT2 TSL 2 BASIC17.73■□□□□ 0.43
ZNF253O75346 KMT2B-201ENST00000420124 8469 ntAPPRIS P1 TSL 1 (best) BASIC17.73■□□□□ 0.43
ZNF253O75346 SLC39A2-201ENST00000298681 1379 ntAPPRIS P1 TSL 1 (best) BASIC17.73■□□□□ 0.43
ZNF253O75346 RARA-AS1-201ENST00000581080 1790 ntTSL 1 (best) BASIC17.73■□□□□ 0.43
ZNF253O75346 WTAP-207ENST00000631126 1430 ntTSL 3 BASIC17.72■□□□□ 0.43
ZNF253O75346 PNKP-201ENST00000322344 2041 ntAPPRIS P1 TSL 1 (best) BASIC17.72■□□□□ 0.43
ZNF253O75346 KLC1-201ENST00000246489 2294 ntAPPRIS P1 TSL 5 BASIC17.72■□□□□ 0.43
ZNF253O75346 KLC1-224ENST00000557450 2265 ntTSL 5 BASIC17.72■□□□□ 0.43
ZNF253O75346 DONSON-201ENST00000303071 2170 ntAPPRIS P1 TSL 1 (best) BASIC17.72■□□□□ 0.43
ZNF253O75346 CCDC9-201ENST00000221922 2093 ntAPPRIS P1 TSL 1 (best) BASIC17.72■□□□□ 0.43
ZNF253O75346 LURAP1L-201ENST00000319264 1753 ntAPPRIS P1 TSL 1 (best) BASIC17.72■□□□□ 0.43
ZNF253O75346 SLC52A2-202ENST00000402965 1777 ntAPPRIS P1 TSL 2 BASIC17.72■□□□□ 0.43
ZNF253O75346 SPSB3-208ENST00000566339 1784 ntAPPRIS P1 TSL 1 (best) BASIC17.72■□□□□ 0.43
ZNF253O75346 MYO10-205ENST00000507288 1677 ntTSL 1 (best) BASIC17.72■□□□□ 0.43
ZNF253O75346 NXNL1-201ENST00000301944 946 ntAPPRIS P1 TSL 1 (best) BASIC17.72■□□□□ 0.43
ZNF253O75346 HES4-202ENST00000428771 1040 ntTSL 2 BASIC17.72■□□□□ 0.43
ZNF253O75346 FGD5-AS1-204ENST00000430166 1184 ntTSL 2 BASIC17.72■□□□□ 0.43
ZNF253O75346 TMEM114-202ENST00000568335 899 ntTSL 3 BASIC17.72■□□□□ 0.43
ZNF253O75346 AC022413.1-201ENST00000624602 984 ntBASIC17.72■□□□□ 0.43
ZNF253O75346 FOXO3B-201ENST00000395675 1928 ntBASIC17.72■□□□□ 0.43
ZNF253O75346 AL117328.2-201ENST00000624617 1940 ntBASIC17.72■□□□□ 0.43
ZNF253O75346 AC073188.6-202ENST00000616616 2281 ntTSL 1 (best) BASIC17.72■□□□□ 0.43
ZNF253O75346 WBP1-202ENST00000393972 1325 ntTSL 2 BASIC17.72■□□□□ 0.43
ZNF253O75346 PRSS56-201ENST00000449534 2157 ntAPPRIS ALT2 TSL 5 BASIC17.72■□□□□ 0.43
ZNF253O75346 PRSS56-203ENST00000617714 2158 ntAPPRIS P2 TSL 5 BASIC17.72■□□□□ 0.43
ZNF253O75346 AC004812.2-201ENST00000611079 2094 ntBASIC17.71■□□□□ 0.43
ZNF253O75346 ARFIP2-202ENST00000396777 1868 ntAPPRIS P1 TSL 2 BASIC17.71■□□□□ 0.43
ZNF253O75346 DOHH-201ENST00000427575 2031 ntAPPRIS P1 TSL 1 (best) BASIC17.71■□□□□ 0.43
ZNF253O75346 FAM86JP-203ENST00000485843 2012 ntTSL 1 (best) BASIC17.71■□□□□ 0.43
ZNF253O75346 SNHG7-201ENST00000414282 2357 ntTSL 2 BASIC17.71■□□□□ 0.43
ZNF253O75346 FLVCR1-AS1-203ENST00000426161 892 ntTSL 1 (best) BASIC17.71■□□□□ 0.43
ZNF253O75346 FCGRT-217ENST00000599988 660 ntTSL 5 BASIC17.71■□□□□ 0.43
ZNF253O75346 MAP2K2-201ENST00000262948 1734 ntAPPRIS P1 TSL 1 (best) BASIC17.71■□□□□ 0.43
ZNF253O75346 SHD-204ENST00000599689 1729 ntTSL 5 BASIC17.71■□□□□ 0.43
ZNF253O75346 RAB40B-201ENST00000269347 2189 ntTSL 2 BASIC17.71■□□□□ 0.43
ZNF253O75346 UBTF-213ENST00000533177 3011 ntTSL 5 BASIC17.71■□□□□ 0.43
ZNF253O75346 NTNG2-202ENST00000393229 4792 ntAPPRIS P1 TSL 1 (best) BASIC17.71■□□□□ 0.42
ZNF253O75346 CBARP-202ENST00000382477 2453 ntAPPRIS ALT2 TSL 5 BASIC17.71■□□□□ 0.42
ZNF253O75346 SOBP-201ENST00000317357 5245 ntAPPRIS P1 TSL 5 BASIC17.7■□□□□ 0.42
ZNF253O75346 DEXI-202ENST00000469379 1393 ntAPPRIS P1 TSL 2 BASIC17.7■□□□□ 0.42
ZNF253O75346 SUGCT-201ENST00000335693 1645 ntAPPRIS ALT2 TSL 1 (best) BASIC17.7■□□□□ 0.42
ZNF253O75346 SH3GLB2-203ENST00000372564 2982 ntAPPRIS P1 TSL 1 (best) BASIC17.7■□□□□ 0.42
ZNF253O75346 C1orf122-201ENST00000373042 973 ntAPPRIS P3 TSL 1 (best) BASIC17.7■□□□□ 0.42
ZNF253O75346 RAP2CP1-202ENST00000605179 643 ntBASIC17.7■□□□□ 0.42
ZNF253O75346 MIR7108-201ENST00000614319 87 ntBASIC17.7■□□□□ 0.42
ZNF253O75346 DPF1-217ENST00000614244 2356 ntTSL 1 (best) BASIC17.7■□□□□ 0.42
ZNF253O75346 HLA-L-211ENST00000482052 1765 ntBASIC17.7■□□□□ 0.42
ZNF253O75346 ZNF444-211ENST00000592949 1906 ntAPPRIS ALT2 TSL 1 (best) BASIC17.7■□□□□ 0.42
ZNF253O75346 SMOX-201ENST00000278795 2164 ntTSL 1 (best) BASIC17.7■□□□□ 0.42
ZNF253O75346 CERS1-205ENST00000623927 2558 ntAPPRIS P1 TSL 1 (best) BASIC17.7■□□□□ 0.42
ZNF253O75346 RFNG-201ENST00000310496 1828 ntAPPRIS P1 TSL 2 BASIC17.7■□□□□ 0.42
ZNF253O75346 CBWD5-202ENST00000377384 1347 ntTSL 1 (best) BASIC17.7■□□□□ 0.42
ZNF253O75346 HACD1-202ENST00000361271 2237 ntAPPRIS P1 TSL 1 (best) BASIC17.7■□□□□ 0.42
ZNF253O75346 LINGO3-201ENST00000585527 2241 ntAPPRIS P1 BASIC17.7■□□□□ 0.42
ZNF253O75346 RASL10A-201ENST00000216101 1490 ntAPPRIS P1 TSL 1 (best) BASIC17.69■□□□□ 0.42
ZNF253O75346 GGH-201ENST00000260118 1607 ntAPPRIS P1 TSL 1 (best) BASIC17.69■□□□□ 0.42
ZNF253O75346 ATG16L2-205ENST00000534905 1614 ntTSL 1 (best) BASIC17.69■□□□□ 0.42
ZNF253O75346 STOML1-201ENST00000316900 2169 ntTSL 2 BASIC17.69■□□□□ 0.42
ZNF253O75346 SPATA2L-201ENST00000289805 2335 ntAPPRIS P1 TSL 1 (best) BASIC17.69■□□□□ 0.42
ZNF253O75346 SNX18-201ENST00000326277 2063 ntTSL 2 BASIC17.69■□□□□ 0.42
ZNF253O75346 RPS6KA2-201ENST00000265678 5824 ntAPPRIS P1 TSL 1 (best) BASIC17.69■□□□□ 0.42
ZNF253O75346 PEBP1-201ENST00000261313 1697 ntAPPRIS P1 TSL 1 (best) BASIC17.69■□□□□ 0.42
ZNF253O75346 MXD3-208ENST00000513063 861 ntAPPRIS P1 TSL 5 BASIC17.69■□□□□ 0.42
Retrieved 100 of 98,524 protein–RNA pairs in 11.4 ms