Protein–RNA interactions for Protein: O60858

TRIM13, E3 ubiquitin-protein ligase TRIM13, humanhuman

Predictions only

Length 407 aa.

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Protein RNA Prediction (catRAPID) Interaction (ENCODE eCLIP)
Gene UniProt Accession Transcript Symbol Ensembl Transcript ID Length Transcript Status Prediction Score Prediction z-Score p-Value Fold Change
TRIM13O60858 KCNK13-201ENST00000282146 2522 ntAPPRIS P1 TSL 1 (best) BASIC22.61■■□□□ 1.21
TRIM13O60858 MRPL51-201ENST00000229238 1234 ntAPPRIS P1 TSL 1 (best) BASIC22.61■■□□□ 1.21
TRIM13O60858 C1QL3-201ENST00000298943 2493 ntAPPRIS P1 TSL 1 (best) BASIC22.61■■□□□ 1.21
TRIM13O60858 SLC30A2-201ENST00000374276 2494 ntAPPRIS P1 TSL 1 (best) BASIC22.61■■□□□ 1.21
TRIM13O60858 AC138647.1-201ENST00000427937 648 ntAPPRIS P1 TSL 5 BASIC22.61■■□□□ 1.21
TRIM13O60858 PPP1CC-206ENST00000550991 1882 ntTSL 2 BASIC22.61■■□□□ 1.21
TRIM13O60858 CAPNS1-207ENST00000589146 578 ntTSL 3 BASIC22.61■■□□□ 1.21
TRIM13O60858 CAPNS1-211ENST00000590874 926 ntTSL 5 BASIC22.61■■□□□ 1.21
TRIM13O60858 POU2F3-206ENST00000543440 1953 ntAPPRIS P1 TSL 1 (best) BASIC22.61■■□□□ 1.21
TRIM13O60858 MATK-204ENST00000585778 1994 ntAPPRIS ALT2 TSL 1 (best) BASIC22.61■■□□□ 1.21
TRIM13O60858 NR6A1-201ENST00000344523 1846 ntAPPRIS ALT2 TSL 5 BASIC22.61■■□□□ 1.21
TRIM13O60858 ABHD6-201ENST00000295962 2393 ntAPPRIS P1 TSL 1 (best) BASIC22.61■■□□□ 1.21
TRIM13O60858 BCL7B-202ENST00000411832 1458 ntTSL 2 BASIC22.6■■□□□ 1.21
TRIM13O60858 AC090877.2-201ENST00000558441 1738 ntBASIC22.6■■□□□ 1.21
TRIM13O60858 MTMR14-202ENST00000351233 2105 ntAPPRIS ALT2 TSL 1 (best) BASIC22.6■■□□□ 1.21
TRIM13O60858 YPEL1-202ENST00000403503 466 ntTSL 3 BASIC22.6■■□□□ 1.21
TRIM13O60858 SPAG7-205ENST00000573366 1668 ntTSL 3 BASIC22.6■■□□□ 1.21
TRIM13O60858 TSPY4-202ENST00000426950 1179 ntAPPRIS P5 TSL 5 BASIC22.59■■□□□ 1.21
TRIM13O60858 ST3GAL5-231ENST00000639119 2131 ntTSL 5 BASIC22.59■■□□□ 1.21
TRIM13O60858 TM9SF3-201ENST00000371142 6141 ntAPPRIS P1 TSL 1 (best) BASIC22.59■■□□□ 1.21
TRIM13O60858 OSCAR-202ENST00000351806 1375 ntAPPRIS ALT2 TSL 1 (best) BASIC22.59■■□□□ 1.21
TRIM13O60858 ASF1B-201ENST00000263382 2059 ntAPPRIS P1 TSL 1 (best) BASIC22.59■■□□□ 1.21
TRIM13O60858 TRIM72-202ENST00000613872 1573 ntTSL 1 (best) BASIC22.59■■□□□ 1.21
TRIM13O60858 CDR2-201ENST00000268383 2702 ntAPPRIS P1 TSL 1 (best) BASIC22.59■■□□□ 1.21
TRIM13O60858 SLIT1-203ENST00000371041 1695 ntTSL 2 BASIC22.58■■□□□ 1.21
TRIM13O60858 CDX1-201ENST00000231656 1758 ntAPPRIS P1 TSL 1 (best) BASIC22.58■■□□□ 1.21
TRIM13O60858 MEIOB-202ENST00000397344 1792 ntTSL 5 BASIC22.58■■□□□ 1.21
TRIM13O60858 AFDN-AS1-201ENST00000359760 2238 ntTSL 1 (best) BASIC22.58■■□□□ 1.21
TRIM13O60858 ARRDC1-AS1-203ENST00000623970 2210 ntTSL 5 BASIC22.58■■□□□ 1.21
TRIM13O60858 PPP4C-201ENST00000279387 1407 ntAPPRIS P1 TSL 1 (best) BASIC22.58■■□□□ 1.21
TRIM13O60858 DONSON-210ENST00000453626 2332 ntTSL 5 BASIC22.58■■□□□ 1.21
TRIM13O60858 ARX-201ENST00000379044 2876 ntAPPRIS P1 TSL 1 (best) BASIC22.58■■□□□ 1.21
TRIM13O60858 WBP1-201ENST00000233615 1294 ntAPPRIS P2 TSL 1 (best) BASIC22.58■■□□□ 1.21
TRIM13O60858 FAM136A-202ENST00000430566 885 ntTSL 3 BASIC22.58■■□□□ 1.21
TRIM13O60858 RPS2P7-201ENST00000447334 885 ntBASIC22.58■■□□□ 1.21
TRIM13O60858 ANOS2P-203ENST00000472227 1816 ntBASIC22.58■■□□□ 1.21
TRIM13O60858 SLC35B2-201ENST00000393810 1898 ntTSL 2 BASIC22.58■■□□□ 1.2
TRIM13O60858 DNAAF3-203ENST00000524407 2059 ntAPPRIS ALT2 TSL 1 (best) BASIC22.58■■□□□ 1.2
TRIM13O60858 NRG2-201ENST00000289409 2535 ntAPPRIS ALT2 TSL 5 BASIC22.57■■□□□ 1.2
TRIM13O60858 PIGX-201ENST00000296333 953 ntAPPRIS ALT2 TSL 2 BASIC22.57■■□□□ 1.2
TRIM13O60858 NKX2-5-204ENST00000521848 1027 ntTSL 2 BASIC22.57■■□□□ 1.2
TRIM13O60858 DTNB-210ENST00000407186 2275 ntTSL 5 BASIC22.57■■□□□ 1.2
TRIM13O60858 BTBD6-201ENST00000327471 1948 ntAPPRIS ALT2 TSL 2 BASIC22.57■■□□□ 1.2
TRIM13O60858 AL161729.1-201ENST00000604104 1402 ntBASIC22.57■■□□□ 1.2
TRIM13O60858 CDC16-206ENST00000375310 2156 ntTSL 1 (best) BASIC22.56■■□□□ 1.2
TRIM13O60858 MAGI2-201ENST00000354212 6880 ntAPPRIS P3 TSL 1 (best) BASIC22.56■■□□□ 1.2
TRIM13O60858 RILP-201ENST00000301336 1771 ntAPPRIS P1 TSL 1 (best) BASIC22.56■■□□□ 1.2
TRIM13O60858 MROH6-202ENST00000524906 1794 ntAPPRIS ALT2 TSL 3 BASIC22.56■■□□□ 1.2
TRIM13O60858 MANF-204ENST00000528157 1153 ntAPPRIS P1 TSL 1 (best) BASIC22.56■■□□□ 1.2
TRIM13O60858 MIR4449-201ENST00000578365 66 ntBASIC22.56■■□□□ 1.2
TRIM13O60858 PDE10A-205ENST00000616273 2118 ntTSL 2 BASIC22.56■■□□□ 1.2
TRIM13O60858 BEST2-204ENST00000553030 2000 ntAPPRIS P1 TSL 5 BASIC22.56■■□□□ 1.2
TRIM13O60858 GALC-202ENST00000393568 2054 ntTSL 2 BASIC22.56■■□□□ 1.2
TRIM13O60858 TNFRSF4-201ENST00000379236 1068 ntAPPRIS P1 TSL 1 (best) BASIC22.55■■□□□ 1.2
TRIM13O60858 DONSON-204ENST00000432378 1618 ntTSL 5 BASIC22.55■■□□□ 1.2
TRIM13O60858 NCK2-201ENST00000233154 2683 ntAPPRIS P1 TSL 5 BASIC22.55■■□□□ 1.2
TRIM13O60858 APBB3-204ENST00000358580 2020 ntTSL 5 BASIC22.55■■□□□ 1.2
TRIM13O60858 HADH-209ENST00000603302 2032 ntTSL 1 (best) BASIC22.55■■□□□ 1.2
TRIM13O60858 ASRGL1-202ENST00000415229 2270 ntAPPRIS P1 TSL 1 (best) BASIC22.55■■□□□ 1.2
TRIM13O60858 HAUS3-202ENST00000443786 2430 ntAPPRIS P1 TSL 1 (best) BASIC22.55■■□□□ 1.2
TRIM13O60858 CADPS-219ENST00000612439 5455 ntTSL 1 (best) BASIC22.54■■□□□ 1.2
TRIM13O60858 MRPL10-202ENST00000351111 1725 ntAPPRIS P1 TSL 1 (best) BASIC22.54■■□□□ 1.2
TRIM13O60858 EI24-213ENST00000618552 1747 ntTSL 5 BASIC22.54■■□□□ 1.2
TRIM13O60858 PFKFB3-201ENST00000317350 1999 ntAPPRIS ALT1 TSL 5 BASIC22.54■■□□□ 1.2
TRIM13O60858 HOMER3-201ENST00000221222 1384 ntAPPRIS ALT1 TSL 5 BASIC22.54■■□□□ 1.2
TRIM13O60858 TCF3-203ENST00000395423 2779 ntTSL 5 BASIC22.54■■□□□ 1.2
TRIM13O60858 KLC3-201ENST00000391946 1780 ntAPPRIS P2 TSL 1 (best) BASIC22.54■■□□□ 1.2
TRIM13O60858 PHLPP1-201ENST00000262719 6390 ntAPPRIS P1 TSL 1 (best) BASIC22.54■■□□□ 1.2
TRIM13O60858 CENPV-201ENST00000299736 1165 ntAPPRIS P1 TSL 1 (best) BASIC22.54■■□□□ 1.2
TRIM13O60858 SOCS2-202ENST00000536696 1065 ntAPPRIS P1 TSL 2 BASIC22.54■■□□□ 1.2
TRIM13O60858 PITX3-202ENST00000539804 1187 ntAPPRIS P1 TSL 5 BASIC22.54■■□□□ 1.2
TRIM13O60858 AC096541.1-201ENST00000445070 1807 ntTSL 2 BASIC22.54■■□□□ 1.2
TRIM13O60858 CD37-213ENST00000598095 1598 ntTSL 2 BASIC22.54■■□□□ 1.2
TRIM13O60858 POLDIP2-201ENST00000540200 2121 ntAPPRIS P1 TSL 1 (best) BASIC22.54■■□□□ 1.2
TRIM13O60858 MRPL38-201ENST00000309352 1888 ntAPPRIS P1 TSL 1 (best) BASIC22.54■■□□□ 1.2
TRIM13O60858 TANGO2-207ENST00000420290 1859 ntTSL 2 BASIC22.54■■□□□ 1.2
TRIM13O60858 DXO-201ENST00000337523 1628 ntAPPRIS P1 TSL 1 (best) BASIC22.53■■□□□ 1.2
TRIM13O60858 PLD4-201ENST00000392593 6515 ntAPPRIS P3 TSL 1 (best) BASIC22.53■■□□□ 1.2
TRIM13O60858 SPON2-222ENST00000617421 2156 ntAPPRIS P1 TSL 5 BASIC22.53■■□□□ 1.2
TRIM13O60858 MATK-202ENST00000395040 1907 ntAPPRIS ALT2 TSL 1 (best) BASIC22.53■■□□□ 1.2
TRIM13O60858 MRGBP-201ENST00000370487 2781 ntAPPRIS P1 TSL 1 (best) BASIC22.53■■□□□ 1.2
TRIM13O60858 ZNF707-222ENST00000532158 2218 ntAPPRIS P1 TSL 1 (best) BASIC22.53■■□□□ 1.2
TRIM13O60858 TMEM185B-201ENST00000426077 2131 ntAPPRIS P1 BASIC22.53■■□□□ 1.2
TRIM13O60858 CLDND1-226ENST00000513287 999 ntAPPRIS P1 TSL 2 BASIC22.53■■□□□ 1.2
TRIM13O60858 FAM159A-204ENST00000517870 748 ntAPPRIS P1 TSL 1 (best) BASIC22.53■■□□□ 1.2
TRIM13O60858 SSSCA1-AS1-201ENST00000567594 614 ntBASIC22.53■■□□□ 1.2
TRIM13O60858 CCDC24-201ENST00000372318 1463 ntAPPRIS P2 TSL 1 (best) BASIC22.53■■□□□ 1.2
TRIM13O60858 LYRM1-201ENST00000219168 1626 ntAPPRIS P1 TSL 2 BASIC22.53■■□□□ 1.2
TRIM13O60858 SSX2IP-203ENST00000437941 5843 ntTSL 2 BASIC22.53■■□□□ 1.2
TRIM13O60858 PSMG3-202ENST00000288607 1391 ntAPPRIS P1 TSL 1 (best) BASIC22.52■■□□□ 1.2
TRIM13O60858 TNFRSF10B-202ENST00000347739 1723 ntAPPRIS ALT2 TSL 1 (best) BASIC22.52■■□□□ 1.2
TRIM13O60858 AC092068.2-201ENST00000590491 1708 ntBASIC22.52■■□□□ 1.2
TRIM13O60858 IGFBP2-201ENST00000233809 1439 ntAPPRIS P1 TSL 1 (best) BASIC22.52■■□□□ 1.2
TRIM13O60858 UPF3A-201ENST00000351487 2235 ntTSL 1 (best) BASIC22.52■■□□□ 1.2
TRIM13O60858 GRPEL2-204ENST00000513661 546 ntTSL 2 BASIC22.52■■□□□ 1.2
TRIM13O60858 MAPKAPK5-AS1-201ENST00000428207 2290 ntTSL 1 (best) BASIC22.52■■□□□ 1.2
TRIM13O60858 MYH7B-209ENST00000618182 6197 ntAPPRIS ALT2 TSL 5 BASIC22.52■■□□□ 1.2
TRIM13O60858 TLX1-203ENST00000467928 1838 ntTSL 1 (best) BASIC22.52■■□□□ 1.2
TRIM13O60858 UBE2S-201ENST00000264552 2548 ntAPPRIS P1 TSL 1 (best) BASIC22.52■■□□□ 1.19
TRIM13O60858 C19orf12-207ENST00000592153 1504 ntTSL 1 (best) BASIC22.52■■□□□ 1.19
Retrieved 100 of 98,524 protein–RNA pairs in 72.3 ms