Protein–RNA interactions for Protein: O14917

PCDH17, Protocadherin-17, humanhuman

Predictions only

Length 1,159 aa.

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Protein RNA Prediction (catRAPID) Interaction (ENCODE eCLIP)
Gene UniProt Accession Transcript Symbol Ensembl Transcript ID Length Transcript Status Prediction Score Prediction z-Score p-Value Fold Change
PCDH17O14917 C21orf2-202ENST00000339818 2233 ntAPPRIS P3 TSL 1 (best) BASIC21.9■■□□□ 1.1
PCDH17O14917 PLEKHO1-202ENST00000369126 1809 ntTSL 1 (best) BASIC21.9■■□□□ 1.1
PCDH17O14917 TMEM150C-201ENST00000449862 1990 ntAPPRIS P1 TSL 1 (best) BASIC21.89■■□□□ 1.09
PCDH17O14917 SDS-201ENST00000257549 1606 ntAPPRIS P1 TSL 2 BASIC21.89■■□□□ 1.09
PCDH17O14917 NKIRAS2-209ENST00000479407 992 ntTSL 3 BASIC21.89■■□□□ 1.09
PCDH17O14917 RRAS2-201ENST00000256196 1516 ntAPPRIS P1 TSL 1 (best) BASIC21.89■■□□□ 1.09
PCDH17O14917 SYNGR3-201ENST00000248121 2051 ntAPPRIS P1 TSL 1 (best) BASIC21.89■■□□□ 1.09
PCDH17O14917 THRA-201ENST00000264637 2538 ntTSL 1 (best) BASIC21.88■■□□□ 1.09
PCDH17O14917 NPHS2-202ENST00000367616 1670 ntTSL 1 (best) BASIC21.88■■□□□ 1.09
PCDH17O14917 RABEP2-203ENST00000544477 1645 ntTSL 2 BASIC21.88■■□□□ 1.09
PCDH17O14917 NAB1-202ENST00000409581 2360 ntAPPRIS P3 TSL 2 BASIC21.88■■□□□ 1.09
PCDH17O14917 MTNR1B-201ENST00000257068 1565 ntAPPRIS P1 TSL 1 (best) BASIC21.88■■□□□ 1.09
PCDH17O14917 MT1E-201ENST00000306061 704 ntAPPRIS P1 TSL 1 (best) BASIC21.88■■□□□ 1.09
PCDH17O14917 FEZ1-202ENST00000366139 1053 ntTSL 2 BASIC21.88■■□□□ 1.09
PCDH17O14917 TK2-202ENST00000417693 1046 ntTSL 2 BASIC21.88■■□□□ 1.09
PCDH17O14917 TRIM14-203ENST00000375098 1792 ntAPPRIS P1 TSL 2 BASIC21.88■■□□□ 1.09
PCDH17O14917 ID2-201ENST00000234091 2041 ntAPPRIS P1 TSL 1 (best) BASIC21.88■■□□□ 1.09
PCDH17O14917 SLBP-206ENST00000489418 1977 ntAPPRIS P2 TSL 1 (best) BASIC21.88■■□□□ 1.09
PCDH17O14917 SLC22A31-206ENST00000614943 1860 ntTSL 5 BASIC21.88■■□□□ 1.09
PCDH17O14917 YWHAH-201ENST00000248975 1825 ntAPPRIS P1 TSL 1 (best) BASIC21.87■■□□□ 1.09
PCDH17O14917 BTBD6-205ENST00000536364 1973 ntAPPRIS P2 TSL 5 BASIC21.87■■□□□ 1.09
PCDH17O14917 NOX4-204ENST00000393282 560 ntTSL 1 (best) BASIC21.87■■□□□ 1.09
PCDH17O14917 HMGA2-202ENST00000393577 611 ntTSL 3 BASIC21.87■■□□□ 1.09
PCDH17O14917 BRD3-202ENST00000371834 2529 ntAPPRIS ALT2 TSL 1 (best) BASIC21.87■■□□□ 1.09
PCDH17O14917 RAB40B-201ENST00000269347 2189 ntTSL 2 BASIC21.87■■□□□ 1.09
PCDH17O14917 AC105219.1-201ENST00000531565 1963 ntTSL 1 (best) BASIC21.87■■□□□ 1.09
PCDH17O14917 KAT8-202ENST00000448516 1789 ntTSL 1 (best) BASIC21.87■■□□□ 1.09
PCDH17O14917 ELOC-206ENST00000520242 1573 ntAPPRIS P1 TSL 1 (best) BASIC21.87■■□□□ 1.09
PCDH17O14917 MSX2-201ENST00000239243 2241 ntAPPRIS P1 TSL 1 (best) BASIC21.86■■□□□ 1.09
PCDH17O14917 GPR160-201ENST00000355897 2039 ntAPPRIS P1 TSL 1 (best) BASIC21.86■■□□□ 1.09
PCDH17O14917 KRT16P3-201ENST00000439127 1283 ntBASIC21.86■■□□□ 1.09
PCDH17O14917 TMEM218-215ENST00000532407 1103 ntAPPRIS P1 TSL 1 (best) BASIC21.86■■□□□ 1.09
PCDH17O14917 AP001267.3-203ENST00000554407 579 ntTSL 2 BASIC21.86■■□□□ 1.09
PCDH17O14917 NAA30-203ENST00000555166 1294 ntAPPRIS ALT2 TSL 2 BASIC21.86■■□□□ 1.09
PCDH17O14917 CCER2-201ENST00000571838 1057 ntAPPRIS P2 TSL 5 BASIC21.86■■□□□ 1.09
PCDH17O14917 NBPF26-209ENST00000624419 1133 ntTSL 5 BASIC21.86■■□□□ 1.09
PCDH17O14917 CTBP1-203ENST00000382952 2467 ntAPPRIS P1 TSL 1 (best) BASIC21.86■■□□□ 1.09
PCDH17O14917 RAP2A-201ENST00000245304 5487 ntAPPRIS P1 TSL 1 (best) BASIC21.86■■□□□ 1.09
PCDH17O14917 PKMYT1-211ENST00000573944 1891 ntAPPRIS P1 TSL 5 BASIC21.86■■□□□ 1.09
PCDH17O14917 TARSL2-207ENST00000615656 2356 ntAPPRIS ALT2 TSL 5 BASIC21.85■■□□□ 1.09
PCDH17O14917 CACNG6-203ENST00000352529 1635 ntTSL 5 BASIC21.85■■□□□ 1.09
PCDH17O14917 UNC93B8-201ENST00000511903 705 ntBASIC21.85■■□□□ 1.09
PCDH17O14917 GRAMD4P7-201ENST00000578182 1232 ntBASIC21.85■■□□□ 1.09
PCDH17O14917 GDF6-202ENST00000620978 973 ntTSL 1 (best) BASIC21.85■■□□□ 1.09
PCDH17O14917 GNAL-201ENST00000269162 1722 ntAPPRIS P1 TSL 2 BASIC21.85■■□□□ 1.09
PCDH17O14917 RBMXL2-201ENST00000306904 1874 ntAPPRIS P1 BASIC21.85■■□□□ 1.09
PCDH17O14917 BMP2K-204ENST00000502871 3195 ntAPPRIS P3 TSL 1 (best) BASIC21.85■■□□□ 1.09
PCDH17O14917 SMOX-203ENST00000339123 2074 ntTSL 1 (best) BASIC21.84■■□□□ 1.09
PCDH17O14917 TARBP1-201ENST00000040877 5130 ntAPPRIS P1 TSL 1 (best) BASIC21.84■■□□□ 1.09
PCDH17O14917 CBARP-202ENST00000382477 2453 ntAPPRIS ALT2 TSL 5 BASIC21.84■■□□□ 1.09
PCDH17O14917 ANKRD54-201ENST00000215941 2184 ntAPPRIS P1 TSL 1 (best) BASIC21.84■■□□□ 1.09
PCDH17O14917 TMED2-201ENST00000262225 2560 ntAPPRIS P1 TSL 1 (best) BASIC21.84■■□□□ 1.09
PCDH17O14917 KLF15-201ENST00000296233 2574 ntAPPRIS P1 TSL 1 (best) BASIC21.84■■□□□ 1.09
PCDH17O14917 TST-201ENST00000249042 1211 ntAPPRIS P1 TSL 1 (best) BASIC21.84■■□□□ 1.09
PCDH17O14917 TCEA1-214ENST00000640382 1234 ntTSL 5 BASIC21.84■■□□□ 1.09
PCDH17O14917 HMCES-204ENST00000502878 1952 ntAPPRIS P1 TSL 1 (best) BASIC21.84■■□□□ 1.09
PCDH17O14917 KAT5-208ENST00000530446 1697 ntTSL 1 (best) BASIC21.84■■□□□ 1.09
PCDH17O14917 PTOV1-220ENST00000601675 1587 ntAPPRIS P1 TSL 1 (best) BASIC21.83■■□□□ 1.09
PCDH17O14917 AF131216.4-201ENST00000638924 1588 ntBASIC21.83■■□□□ 1.09
PCDH17O14917 SAMD4B-208ENST00000598913 2877 ntAPPRIS ALT1 TSL 1 (best) BASIC21.83■■□□□ 1.09
PCDH17O14917 ADAM22-209ENST00000439864 2576 ntTSL 1 (best) BASIC21.83■■□□□ 1.09
PCDH17O14917 DRAP1-201ENST00000312515 989 ntAPPRIS P1 TSL 1 (best) BASIC21.83■■□□□ 1.09
PCDH17O14917 AC073111.5-204ENST00000498682 1167 ntAPPRIS P1 TSL 2 BASIC21.83■■□□□ 1.09
PCDH17O14917 HNRNPUL1-222ENST00000617774 451 ntTSL 5 BASIC21.83■■□□□ 1.09
PCDH17O14917 WRNIP1-205ENST00000618555 2651 ntAPPRIS P1 TSL 1 (best) BASIC21.83■■□□□ 1.09
PCDH17O14917 CLDN15-201ENST00000308344 1370 ntAPPRIS P1 TSL 1 (best) BASIC21.83■■□□□ 1.08
PCDH17O14917 C5orf58-204ENST00000521850 2113 ntAPPRIS ALT2 TSL 1 (best) BASIC21.83■■□□□ 1.08
PCDH17O14917 MRPS7-203ENST00000579002 1638 ntTSL 2 BASIC21.83■■□□□ 1.08
PCDH17O14917 ATP5G2-208ENST00000552242 1950 ntAPPRIS P1 TSL 1 (best) BASIC21.83■■□□□ 1.08
PCDH17O14917 RMI2-201ENST00000312499 1457 ntAPPRIS P1 TSL 1 (best) BASIC21.83■■□□□ 1.08
PCDH17O14917 LRRC61-205ENST00000493307 1456 ntAPPRIS P1 TSL 5 BASIC21.83■■□□□ 1.08
PCDH17O14917 GP1BB-201ENST00000366425 1553 ntAPPRIS P1 TSL 1 (best) BASIC21.82■■□□□ 1.08
PCDH17O14917 CDYL-203ENST00000397588 2184 ntAPPRIS P1 TSL 1 (best) BASIC21.82■■□□□ 1.08
PCDH17O14917 AC090587.2-201ENST00000430222 527 ntTSL 2 BASIC21.82■■□□□ 1.08
PCDH17O14917 AC103702.2-201ENST00000433510 1270 ntTSL 2 BASIC21.82■■□□□ 1.08
PCDH17O14917 AL117209.1-201ENST00000560931 828 ntTSL 3 BASIC21.82■■□□□ 1.08
PCDH17O14917 RBM42-206ENST00000592202 1469 ntTSL 5 BASIC21.82■■□□□ 1.08
PCDH17O14917 THRA-209ENST00000584985 2421 ntTSL 1 (best) BASIC21.81■■□□□ 1.08
PCDH17O14917 ALDH16A1-203ENST00000540132 2174 ntTSL 2 BASIC21.81■■□□□ 1.08
PCDH17O14917 ZDHHC14-204ENST00000414563 3134 ntTSL 1 (best) BASIC21.81■■□□□ 1.08
PCDH17O14917 R3HDM4-201ENST00000361574 1815 ntAPPRIS P1 TSL 1 (best) BASIC21.81■■□□□ 1.08
PCDH17O14917 NKX2-8-201ENST00000258829 1261 ntAPPRIS P1 TSL 1 (best) BASIC21.81■■□□□ 1.08
PCDH17O14917 LSM7-203ENST00000585409 512 ntTSL 2 BASIC21.81■■□□□ 1.08
PCDH17O14917 CFD-202ENST00000592860 809 ntAPPRIS ALT2 TSL 1 (best) BASIC21.81■■□□□ 1.08
PCDH17O14917 MTDHP2-201ENST00000601468 714 ntBASIC21.81■■□□□ 1.08
PCDH17O14917 KLC3-201ENST00000391946 1780 ntAPPRIS P2 TSL 1 (best) BASIC21.81■■□□□ 1.08
PCDH17O14917 RARA-202ENST00000394081 2285 ntTSL 1 (best) BASIC21.81■■□□□ 1.08
PCDH17O14917 NR6A1-201ENST00000344523 1846 ntAPPRIS ALT2 TSL 5 BASIC21.8■■□□□ 1.08
PCDH17O14917 CRIM1-201ENST00000280527 5912 ntAPPRIS P1 TSL 1 (best) BASIC21.8■■□□□ 1.08
PCDH17O14917 ATP5G2-201ENST00000338662 1792 ntTSL 2 BASIC21.8■■□□□ 1.08
PCDH17O14917 MROH6-202ENST00000524906 1794 ntAPPRIS ALT2 TSL 3 BASIC21.8■■□□□ 1.08
PCDH17O14917 PHF11-202ENST00000378319 1359 ntAPPRIS P3 TSL 1 (best) BASIC21.8■■□□□ 1.08
PCDH17O14917 CDKN2B-202ENST00000380142 859 ntTSL 1 (best) BASIC21.8■■□□□ 1.08
PCDH17O14917 MOSPD3-204ENST00000424091 1115 ntTSL 1 (best) BASIC21.8■■□□□ 1.08
PCDH17O14917 TSPY9P-201ENST00000440215 945 ntBASIC21.8■■□□□ 1.08
PCDH17O14917 TSPY11P-201ENST00000442607 1045 ntBASIC21.8■■□□□ 1.08
PCDH17O14917 MCRIP1-202ENST00000457257 942 ntTSL 3 BASIC21.8■■□□□ 1.08
PCDH17O14917 AP002893.1-201ENST00000528885 684 ntTSL 2 BASIC21.8■■□□□ 1.08
PCDH17O14917 MPP5-205ENST00000556345 1163 ntTSL 2 BASIC21.8■■□□□ 1.08
PCDH17O14917 WFDC1-201ENST00000219454 1534 ntAPPRIS P1 TSL 1 (best) BASIC21.8■■□□□ 1.08
Retrieved 100 of 98,524 protein–RNA pairs in 48.6 ms