Protein–RNA interactions for Protein: A0A0B4J274

TRAV20, T-cell receptor alpha variable 20 (Fragment), humanhuman

Predictions only

Length 112 aa.

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Protein RNA Prediction (catRAPID) Interaction (ENCODE eCLIP)
Gene UniProt Accession Transcript Symbol Ensembl Transcript ID Length Transcript Status Prediction Score Prediction z-Score p-Value Fold Change
TRAV20A0A0B4J274 SPNS1-203ENST00000334536 2027 ntTSL 1 (best) BASIC19.38■□□□□ 0.69
TRAV20A0A0B4J274 DACT2-202ENST00000366796 2028 ntAPPRIS ALT2 TSL 1 (best) BASIC19.38■□□□□ 0.69
TRAV20A0A0B4J274 ID4-201ENST00000378700 2344 ntAPPRIS P1 TSL 1 (best) BASIC19.38■□□□□ 0.69
TRAV20A0A0B4J274 WBP1-203ENST00000409737 1110 ntAPPRIS ALT1 TSL 5 BASIC19.38■□□□□ 0.69
TRAV20A0A0B4J274 AC092807.3-205ENST00000467666 531 ntTSL 3 BASIC19.38■□□□□ 0.69
TRAV20A0A0B4J274 TSPAN17-204ENST00000503045 1019 ntTSL 5 BASIC19.38■□□□□ 0.69
TRAV20A0A0B4J274 FLT1-202ENST00000539099 1911 ntTSL 1 (best) BASIC19.38■□□□□ 0.69
TRAV20A0A0B4J274 PSMG1-201ENST00000331573 2154 ntAPPRIS P1 TSL 1 (best) BASIC19.37■□□□□ 0.69
TRAV20A0A0B4J274 CDC16-211ENST00000628084 2058 ntTSL 5 BASIC19.37■□□□□ 0.69
TRAV20A0A0B4J274 SLBP-206ENST00000489418 1977 ntAPPRIS P2 TSL 1 (best) BASIC19.37■□□□□ 0.69
TRAV20A0A0B4J274 AC011511.4-201ENST00000586529 1850 ntAPPRIS P1 TSL 5 BASIC19.37■□□□□ 0.69
TRAV20A0A0B4J274 PDSS1-201ENST00000376215 1626 ntAPPRIS P1 TSL 1 (best) BASIC19.37■□□□□ 0.69
TRAV20A0A0B4J274 RRAD-201ENST00000299759 1569 ntAPPRIS P1 TSL 1 (best) BASIC19.37■□□□□ 0.69
TRAV20A0A0B4J274 FHL2-203ENST00000358129 1578 ntTSL 5 BASIC19.37■□□□□ 0.69
TRAV20A0A0B4J274 LRIG1-202ENST00000383703 5283 ntTSL 1 (best) BASIC19.37■□□□□ 0.69
TRAV20A0A0B4J274 ARPC4-208ENST00000498623 942 ntTSL 2 BASIC19.37■□□□□ 0.69
TRAV20A0A0B4J274 CDKN3-207ENST00000543789 610 ntTSL 5 BASIC19.37■□□□□ 0.69
TRAV20A0A0B4J274 SRR-208ENST00000576848 588 ntTSL 4 BASIC19.37■□□□□ 0.69
TRAV20A0A0B4J274 PHF23-212ENST00000576955 1944 ntTSL 2 BASIC19.37■□□□□ 0.69
TRAV20A0A0B4J274 C1QTNF1-206ENST00000579760 1672 ntAPPRIS P1 TSL 1 (best) BASIC19.36■□□□□ 0.69
TRAV20A0A0B4J274 PRDM13-202ENST00000369215 2429 ntAPPRIS P1 TSL 1 (best) BASIC19.36■□□□□ 0.69
TRAV20A0A0B4J274 SIX2-201ENST00000303077 2205 ntAPPRIS P1 TSL 1 (best) BASIC19.36■□□□□ 0.69
TRAV20A0A0B4J274 PIK3R2-207ENST00000617130 2187 ntAPPRIS P1 TSL 1 (best) BASIC19.36■□□□□ 0.69
TRAV20A0A0B4J274 SENP5-202ENST00000419026 973 ntTSL 3 BASIC19.36■□□□□ 0.69
TRAV20A0A0B4J274 RPP21-222ENST00000433076 577 ntTSL 2 BASIC19.36■□□□□ 0.69
TRAV20A0A0B4J274 C12orf75-207ENST00000552457 689 ntTSL 5 BASIC19.36■□□□□ 0.69
TRAV20A0A0B4J274 PWWP2B-201ENST00000305233 2651 ntAPPRIS P1 TSL 1 (best) BASIC19.36■□□□□ 0.69
TRAV20A0A0B4J274 HNRNPAB-208ENST00000515193 1595 ntAPPRIS ALT2 TSL 5 BASIC19.36■□□□□ 0.69
TRAV20A0A0B4J274 PHC2-202ENST00000373418 2550 ntAPPRIS ALT2 TSL 1 (best) BASIC19.36■□□□□ 0.69
TRAV20A0A0B4J274 TP53I3-201ENST00000238721 1998 ntAPPRIS P1 TSL 1 (best) BASIC19.35■□□□□ 0.69
TRAV20A0A0B4J274 C2CD4D-201ENST00000454109 1757 ntAPPRIS P1 TSL 2 BASIC19.35■□□□□ 0.69
TRAV20A0A0B4J274 TSPAN4-202ENST00000397396 1332 ntTSL 5 BASIC19.35■□□□□ 0.69
TRAV20A0A0B4J274 HABP4-201ENST00000375249 2615 ntAPPRIS P1 TSL 1 (best) BASIC19.35■□□□□ 0.69
TRAV20A0A0B4J274 NPW-201ENST00000329610 498 ntAPPRIS P2 TSL 1 (best) BASIC19.35■□□□□ 0.69
TRAV20A0A0B4J274 C17orf74-202ENST00000574034 1287 ntTSL 1 (best) BASIC19.35■□□□□ 0.69
TRAV20A0A0B4J274 TRIR-202ENST00000588213 841 ntTSL 3 BASIC19.35■□□□□ 0.69
TRAV20A0A0B4J274 AL356740.2-201ENST00000601559 647 ntBASIC19.35■□□□□ 0.69
TRAV20A0A0B4J274 EXOG-217ENST00000630638 197 ntTSL 5 BASIC19.35■□□□□ 0.69
TRAV20A0A0B4J274 GNB2-203ENST00000393926 1641 ntAPPRIS P1 TSL 5 BASIC19.35■□□□□ 0.69
TRAV20A0A0B4J274 PFN2-210ENST00000481767 1620 ntTSL 2 BASIC19.35■□□□□ 0.69
TRAV20A0A0B4J274 SNX5-201ENST00000377759 2270 ntAPPRIS P1 TSL 1 (best) BASIC19.35■□□□□ 0.69
TRAV20A0A0B4J274 PDE5A-201ENST00000264805 3020 ntAPPRIS ALT2 TSL 1 (best) BASIC19.35■□□□□ 0.69
TRAV20A0A0B4J274 ZNF821-201ENST00000313565 1874 ntTSL 1 (best) BASIC19.35■□□□□ 0.69
TRAV20A0A0B4J274 TBL1X-201ENST00000217964 5871 ntTSL 1 (best) BASIC19.35■□□□□ 0.69
TRAV20A0A0B4J274 TTBK2-205ENST00000567274 1777 ntTSL 5 BASIC19.34■□□□□ 0.69
TRAV20A0A0B4J274 RAX2-202ENST00000555978 2145 ntAPPRIS P1 TSL 1 (best) BASIC19.34■□□□□ 0.69
TRAV20A0A0B4J274 EPS8L1-205ENST00000586329 2130 ntTSL 5 BASIC19.34■□□□□ 0.69
TRAV20A0A0B4J274 CLTB-201ENST00000310418 1215 ntAPPRIS P4 TSL 1 (best) BASIC19.34■□□□□ 0.69
TRAV20A0A0B4J274 CLTB-202ENST00000345807 1161 ntAPPRIS ALT1 TSL 1 (best) BASIC19.34■□□□□ 0.69
TRAV20A0A0B4J274 HM13-AS1-201ENST00000412178 489 ntTSL 3 BASIC19.34■□□□□ 0.69
TRAV20A0A0B4J274 PRSS21-201ENST00000005995 1101 ntAPPRIS P1 TSL 1 (best) BASIC19.34■□□□□ 0.69
TRAV20A0A0B4J274 AL117332.1-201ENST00000622628 974 ntBASIC19.34■□□□□ 0.69
TRAV20A0A0B4J274 LINC01970-201ENST00000581489 1810 ntTSL 1 (best) BASIC19.34■□□□□ 0.69
TRAV20A0A0B4J274 NDEL1-202ENST00000380025 2181 ntTSL 5 BASIC19.33■□□□□ 0.69
TRAV20A0A0B4J274 GTPBP3-203ENST00000361619 1894 ntTSL 2 BASIC19.33■□□□□ 0.69
TRAV20A0A0B4J274 NEURL4-202ENST00000399464 5200 ntAPPRIS P4 TSL 1 (best) BASIC19.33■□□□□ 0.69
TRAV20A0A0B4J274 NKX2-8-201ENST00000258829 1261 ntAPPRIS P1 TSL 1 (best) BASIC19.33■□□□□ 0.68
TRAV20A0A0B4J274 IL15RA-209ENST00000397255 759 ntAPPRIS ALT2 TSL 5 BASIC19.33■□□□□ 0.68
TRAV20A0A0B4J274 HDHD5-203ENST00000399852 1118 ntTSL 3 BASIC19.33■□□□□ 0.68
TRAV20A0A0B4J274 MAST4-206ENST00000406374 1066 ntTSL 1 (best) BASIC19.33■□□□□ 0.68
TRAV20A0A0B4J274 IGFBP7-203ENST00000514062 1251 ntAPPRIS ALT2 TSL 2 BASIC19.33■□□□□ 0.68
TRAV20A0A0B4J274 ERGIC1-206ENST00000519860 1000 ntTSL 3 BASIC19.33■□□□□ 0.68
TRAV20A0A0B4J274 IL15RA-216ENST00000530685 660 ntTSL 5 BASIC19.33■□□□□ 0.68
TRAV20A0A0B4J274 MIR3621-201ENST00000580529 85 ntBASIC19.33■□□□□ 0.68
TRAV20A0A0B4J274 SLC16A10-206ENST00000612036 1231 ntTSL 5 BASIC19.33■□□□□ 0.68
TRAV20A0A0B4J274 RAB3IL1-202ENST00000394836 2284 ntAPPRIS P1 TSL 1 (best) BASIC19.33■□□□□ 0.68
TRAV20A0A0B4J274 HS3ST3A1-201ENST00000284110 2527 ntAPPRIS P1 TSL 1 (best) BASIC19.33■□□□□ 0.68
TRAV20A0A0B4J274 HAUS3-202ENST00000443786 2430 ntAPPRIS P1 TSL 1 (best) BASIC19.33■□□□□ 0.68
TRAV20A0A0B4J274 CLK2-203ENST00000368361 2166 ntAPPRIS ALT1 TSL 1 (best) BASIC19.33■□□□□ 0.68
TRAV20A0A0B4J274 NDEL1-201ENST00000334527 2372 ntAPPRIS P1 TSL 1 (best) BASIC19.33■□□□□ 0.68
TRAV20A0A0B4J274 NAB1-202ENST00000409581 2360 ntAPPRIS P3 TSL 2 BASIC19.33■□□□□ 0.68
TRAV20A0A0B4J274 FAM124A-204ENST00000615498 2383 ntTSL 1 (best) BASIC19.33■□□□□ 0.68
TRAV20A0A0B4J274 PLD4-201ENST00000392593 6515 ntAPPRIS P3 TSL 1 (best) BASIC19.33■□□□□ 0.68
TRAV20A0A0B4J274 FKBP8-213ENST00000608443 1849 ntAPPRIS P3 TSL 1 (best) BASIC19.32■□□□□ 0.68
TRAV20A0A0B4J274 GPR160-201ENST00000355897 2039 ntAPPRIS P1 TSL 1 (best) BASIC19.32■□□□□ 0.68
TRAV20A0A0B4J274 HTRA2-201ENST00000258080 2370 ntAPPRIS P1 TSL 1 (best) BASIC19.32■□□□□ 0.68
TRAV20A0A0B4J274 C4orf36-201ENST00000295898 881 ntAPPRIS P1 TSL 1 (best) BASIC19.32■□□□□ 0.68
TRAV20A0A0B4J274 AC004540.2-202ENST00000451264 508 ntTSL 2 BASIC19.32■□□□□ 0.68
TRAV20A0A0B4J274 AC131281.2-201ENST00000520478 145 ntBASIC19.32■□□□□ 0.68
TRAV20A0A0B4J274 RPP38-201ENST00000378197 1457 ntAPPRIS P1 TSL 1 (best) BASIC19.32■□□□□ 0.68
TRAV20A0A0B4J274 CDK9-201ENST00000373264 2463 ntAPPRIS P1 TSL 1 (best) BASIC19.32■□□□□ 0.68
TRAV20A0A0B4J274 PLEKHO1-202ENST00000369126 1809 ntTSL 1 (best) BASIC19.32■□□□□ 0.68
TRAV20A0A0B4J274 P3H3-201ENST00000290510 2632 ntAPPRIS P1 TSL 1 (best) BASIC19.32■□□□□ 0.68
TRAV20A0A0B4J274 IL17RE-203ENST00000421412 2158 ntAPPRIS ALT2 TSL 1 (best) BASIC19.32■□□□□ 0.68
TRAV20A0A0B4J274 DNMT3A-206ENST00000406659 1775 ntTSL 1 (best) BASIC19.32■□□□□ 0.68
TRAV20A0A0B4J274 AF131216.4-201ENST00000638924 1588 ntBASIC19.32■□□□□ 0.68
TRAV20A0A0B4J274 TMC7-205ENST00000569532 2738 ntTSL 2 BASIC19.31■□□□□ 0.68
TRAV20A0A0B4J274 SAV1-201ENST00000324679 3063 ntAPPRIS P1 TSL 1 (best) BASIC19.31■□□□□ 0.68
TRAV20A0A0B4J274 DHFR-203ENST00000505337 1719 ntAPPRIS P1 TSL 2 BASIC19.31■□□□□ 0.68
TRAV20A0A0B4J274 SLC30A3-201ENST00000233535 2260 ntAPPRIS P1 TSL 1 (best) BASIC19.31■□□□□ 0.68
TRAV20A0A0B4J274 GCLC-209ENST00000514004 2356 ntTSL 1 (best) BASIC19.31■□□□□ 0.68
TRAV20A0A0B4J274 LSM4-201ENST00000252816 986 ntTSL 2 BASIC19.31■□□□□ 0.68
TRAV20A0A0B4J274 CLTA-204ENST00000433436 1235 ntAPPRIS ALT1 TSL 1 (best) BASIC19.31■□□□□ 0.68
TRAV20A0A0B4J274 CLTA-209ENST00000538225 1181 ntTSL 2 BASIC19.31■□□□□ 0.68
TRAV20A0A0B4J274 CLTA-210ENST00000540080 989 ntTSL 2 BASIC19.31■□□□□ 0.68
TRAV20A0A0B4J274 FAM228B-208ENST00000613899 1238 ntAPPRIS ALT2 TSL 1 (best) BASIC19.31■□□□□ 0.68
TRAV20A0A0B4J274 TMEM260-202ENST00000538838 1638 ntTSL 1 (best) BASIC19.31■□□□□ 0.68
TRAV20A0A0B4J274 TST-202ENST00000403892 1797 ntAPPRIS P1 TSL 1 (best) BASIC19.31■□□□□ 0.68
TRAV20A0A0B4J274 VGF-202ENST00000445482 2477 ntAPPRIS P1 TSL 5 BASIC19.31■□□□□ 0.68
TRAV20A0A0B4J274 CRACR2B-202ENST00000525077 1578 ntAPPRIS P1 TSL 1 (best) BASIC19.31■□□□□ 0.68
Retrieved 100 of 98,524 protein–RNA pairs in 13.4 ms