Protein–RNA interactions for Protein: Q9Y5P3

RAI2, Retinoic acid-induced protein 2, humanhuman

Predictions only

Length 530 aa.

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Protein RNA Prediction (catRAPID) Interaction (ENCODE eCLIP)
Gene UniProt Accession Transcript Symbol Ensembl Transcript ID Length Transcript Status Prediction Score Prediction z-Score p-Value Fold Change
RAI2Q9Y5P3 SLC39A8-202ENST00000394833 3238 ntAPPRIS P1 TSL 1 (best) BASIC15.32■□□□□ 0.04
RAI2Q9Y5P3 TOB2-201ENST00000327492 4561 ntAPPRIS P1 TSL 1 (best) BASIC15.32■□□□□ 0.04
RAI2Q9Y5P3 CCDC127-201ENST00000296824 9342 ntAPPRIS P1 TSL 1 (best) BASIC15.32■□□□□ 0.04
RAI2Q9Y5P3 PIGT-246ENST00000639499 2021 ntTSL 5 BASIC15.32■□□□□ 0.04
RAI2Q9Y5P3 LY9-204ENST00000368039 1364 ntTSL 1 (best) BASIC15.32■□□□□ 0.04
RAI2Q9Y5P3 SEPT8-206ENST00000378706 4168 ntAPPRIS ALT1 TSL 5 BASIC15.32■□□□□ 0.04
RAI2Q9Y5P3 SULT2B1-202ENST00000323090 1447 ntAPPRIS ALT2 TSL 1 (best) BASIC15.32■□□□□ 0.04
RAI2Q9Y5P3 ZNF586-203ENST00000396154 2163 ntAPPRIS P1 TSL 1 (best) BASIC15.32■□□□□ 0.04
RAI2Q9Y5P3 MBD1-209ENST00000398495 2178 ntTSL 5 BASIC15.32■□□□□ 0.04
RAI2Q9Y5P3 PKIG-204ENST00000372889 1489 ntAPPRIS P1 TSL 5 BASIC15.32■□□□□ 0.04
RAI2Q9Y5P3 PACSIN2-201ENST00000263246 3249 ntAPPRIS P1 TSL 1 (best) BASIC15.32■□□□□ 0.04
RAI2Q9Y5P3 AVL9-201ENST00000318709 6982 ntAPPRIS P1 TSL 2 BASIC15.31■□□□□ 0.04
RAI2Q9Y5P3 MDFIC-202ENST00000393486 4393 ntAPPRIS P1 TSL 1 (best) BASIC15.31■□□□□ 0.04
RAI2Q9Y5P3 IQCA1L-203ENST00000615129 2606 ntAPPRIS P1 TSL 5 BASIC15.31■□□□□ 0.04
RAI2Q9Y5P3 SLC25A32-201ENST00000297578 2891 ntAPPRIS P1 TSL 1 (best) BASIC15.31■□□□□ 0.04
RAI2Q9Y5P3 C4orf19-201ENST00000284437 1949 ntAPPRIS P1 TSL 1 (best) BASIC15.31■□□□□ 0.04
RAI2Q9Y5P3 PPM1B-204ENST00000378551 3877 ntAPPRIS ALT1 TSL 1 (best) BASIC15.31■□□□□ 0.04
RAI2Q9Y5P3 SLC6A13-203ENST00000445055 1950 ntTSL 2 BASIC15.31■□□□□ 0.04
RAI2Q9Y5P3 TRAK1-208ENST00000484786 2008 ntTSL 5 BASIC15.31■□□□□ 0.04
RAI2Q9Y5P3 KIF22-208ENST00000569382 2020 ntTSL 5 BASIC15.31■□□□□ 0.04
RAI2Q9Y5P3 DACT3-203ENST00000410105 3085 ntTSL 2 BASIC15.31■□□□□ 0.04
RAI2Q9Y5P3 RASGEF1C-206ENST00000522500 2055 ntTSL 2 BASIC15.31■□□□□ 0.04
RAI2Q9Y5P3 VAC14-202ENST00000536184 2161 ntTSL 2 BASIC15.31■□□□□ 0.04
RAI2Q9Y5P3 AKAP1-201ENST00000314126 2380 ntTSL 1 (best) BASIC15.31■□□□□ 0.04
RAI2Q9Y5P3 DPP6-205ENST00000427557 2388 ntTSL 2 BASIC15.31■□□□□ 0.04
RAI2Q9Y5P3 COX11-201ENST00000299335 2497 ntAPPRIS P1 TSL 1 (best) BASIC15.31■□□□□ 0.04
RAI2Q9Y5P3 HOGA1-202ENST00000370646 2488 ntAPPRIS P1 TSL 1 (best) BASIC15.31■□□□□ 0.04
RAI2Q9Y5P3 MKNK2-201ENST00000250896 3774 ntAPPRIS P4 TSL 5 BASIC15.31■□□□□ 0.04
RAI2Q9Y5P3 RETN-201ENST00000221515 520 ntAPPRIS P1 TSL 1 (best) BASIC15.31■□□□□ 0.04
RAI2Q9Y5P3 EMC4-201ENST00000249209 852 ntTSL 1 (best) BASIC15.31■□□□□ 0.04
RAI2Q9Y5P3 ATP6V1F-201ENST00000249289 704 ntAPPRIS P1 TSL 1 (best) BASIC15.31■□□□□ 0.04
RAI2Q9Y5P3 C2orf15-202ENST00000409684 1058 ntAPPRIS P1 TSL 3 BASIC15.31■□□□□ 0.04
RAI2Q9Y5P3 GOLGA2P4-201ENST00000441462 777 ntBASIC15.31■□□□□ 0.04
RAI2Q9Y5P3 AP000345.1-201ENST00000454863 569 ntTSL 4 BASIC15.31■□□□□ 0.04
RAI2Q9Y5P3 SEPT7P9-202ENST00000489259 743 ntTSL 3 BASIC15.31■□□□□ 0.04
RAI2Q9Y5P3 IL32-222ENST00000533097 814 ntAPPRIS P4 TSL 2 BASIC15.31■□□□□ 0.04
RAI2Q9Y5P3 COG4-212ENST00000564653 590 ntTSL 5 BASIC15.31■□□□□ 0.04
RAI2Q9Y5P3 AC012615.4-201ENST00000586694 607 ntTSL 4 BASIC15.31■□□□□ 0.04
RAI2Q9Y5P3 C9orf50-202ENST00000619117 796 ntAPPRIS ALT2 TSL 1 (best) BASIC15.31■□□□□ 0.04
RAI2Q9Y5P3 IL32-201ENST00000008180 1056 ntAPPRIS ALT2 TSL 2 BASIC15.31■□□□□ 0.04
RAI2Q9Y5P3 SEC63-201ENST00000369002 6411 ntAPPRIS P1 TSL 1 (best) BASIC15.31■□□□□ 0.04
RAI2Q9Y5P3 GARS-201ENST00000389266 2634 ntAPPRIS P1 TSL 1 (best) BASIC15.31■□□□□ 0.04
RAI2Q9Y5P3 ABCC1-201ENST00000399408 6594 ntTSL 5 BASIC15.31■□□□□ 0.04
RAI2Q9Y5P3 ABCC1-202ENST00000399410 6552 ntAPPRIS P1 TSL 1 (best) BASIC15.31■□□□□ 0.04
RAI2Q9Y5P3 TRIM46-203ENST00000368383 2666 ntTSL 5 BASIC15.31■□□□□ 0.04
RAI2Q9Y5P3 HYAL2-208ENST00000447092 4054 ntAPPRIS P1 TSL 1 (best) BASIC15.31■□□□□ 0.04
RAI2Q9Y5P3 PRR19-201ENST00000341747 1530 ntAPPRIS P2 TSL 5 BASIC15.31■□□□□ 0.04
RAI2Q9Y5P3 SPATA33-210ENST00000611218 1546 ntAPPRIS ALT2 TSL 2 BASIC15.31■□□□□ 0.04
RAI2Q9Y5P3 MTA2-201ENST00000278823 3058 ntAPPRIS P1 TSL 1 (best) BASIC15.31■□□□□ 0.04
RAI2Q9Y5P3 CCDC140-201ENST00000295226 1699 ntAPPRIS P2 TSL 1 (best) BASIC15.31■□□□□ 0.04
RAI2Q9Y5P3 ZXDC-202ENST00000389709 3405 ntAPPRIS P4 TSL 1 (best) BASIC15.31■□□□□ 0.04
RAI2Q9Y5P3 AC003986.2-201ENST00000419944 1711 ntTSL 3 BASIC15.31■□□□□ 0.04
RAI2Q9Y5P3 HSD17B6-205ENST00000554643 1751 ntAPPRIS P1 TSL 5 BASIC15.31■□□□□ 0.04
RAI2Q9Y5P3 MUC1-228ENST00000620103 1811 ntAPPRIS ALT2 TSL 5 BASIC15.31■□□□□ 0.04
RAI2Q9Y5P3 RHPN1-201ENST00000289013 3683 ntAPPRIS P1 TSL 1 (best) BASIC15.31■□□□□ 0.04
RAI2Q9Y5P3 EML4-201ENST00000318522 5549 ntAPPRIS P3 TSL 1 (best) BASIC15.31■□□□□ 0.04
RAI2Q9Y5P3 DHFR-201ENST00000439211 3917 ntAPPRIS P1 TSL 1 (best) BASIC15.31■□□□□ 0.04
RAI2Q9Y5P3 NCAPH2-201ENST00000299821 1996 ntAPPRIS ALT2 TSL 1 (best) BASIC15.31■□□□□ 0.04
RAI2Q9Y5P3 NOX3-201ENST00000159060 2042 ntAPPRIS P1 TSL 1 (best) BASIC15.31■□□□□ 0.04
RAI2Q9Y5P3 PI16-203ENST00000611814 2083 ntAPPRIS P1 TSL 5 BASIC15.31■□□□□ 0.04
RAI2Q9Y5P3 TM4SF4-201ENST00000305354 2101 ntAPPRIS P1 TSL 1 (best) BASIC15.31■□□□□ 0.04
RAI2Q9Y5P3 NEK5-204ENST00000617045 2127 ntAPPRIS P1 TSL 2 BASIC15.31■□□□□ 0.04
RAI2Q9Y5P3 TMEM40-202ENST00000314124 2308 ntAPPRIS P3 TSL 2 BASIC15.31■□□□□ 0.04
RAI2Q9Y5P3 BRF1-205ENST00000440513 2368 ntTSL 2 BASIC15.31■□□□□ 0.04
RAI2Q9Y5P3 SLC22A7-203ENST00000372589 2549 ntAPPRIS ALT2 TSL 2 BASIC15.31■□□□□ 0.04
RAI2Q9Y5P3 CBS-204ENST00000398165 2605 ntAPPRIS P1 TSL 1 (best) BASIC15.3■□□□□ 0.04
RAI2Q9Y5P3 UROC1-202ENST00000383579 2735 ntTSL 1 (best) BASIC15.3■□□□□ 0.04
RAI2Q9Y5P3 DPYSL3-201ENST00000343218 5476 ntTSL 1 (best) BASIC15.3■□□□□ 0.04
RAI2Q9Y5P3 SLC12A5-209ENST00000616201 2955 ntTSL 5 BASIC15.3■□□□□ 0.04
RAI2Q9Y5P3 PAK4-205ENST00000593690 3025 ntAPPRIS P1 TSL 1 (best) BASIC15.3■□□□□ 0.04
RAI2Q9Y5P3 SLC26A1-202ENST00000398516 3109 ntAPPRIS P1 TSL 1 (best) BASIC15.3■□□□□ 0.04
RAI2Q9Y5P3 CBX8-201ENST00000269385 3791 ntAPPRIS P1 TSL 1 (best) BASIC15.3■□□□□ 0.04
RAI2Q9Y5P3 ATRNL1-201ENST00000355044 8479 ntAPPRIS P1 TSL 1 (best) BASIC15.3■□□□□ 0.04
RAI2Q9Y5P3 CMA1-202ENST00000250378 937 ntAPPRIS P1 TSL 1 (best) BASIC15.3■□□□□ 0.04
RAI2Q9Y5P3 DEGS1-201ENST00000323699 2101 ntAPPRIS P1 TSL 1 (best) BASIC15.3■□□□□ 0.04
RAI2Q9Y5P3 ZNRD1-201ENST00000332435 864 ntAPPRIS P1 TSL 1 (best) BASIC15.3■□□□□ 0.04
RAI2Q9Y5P3 NPAS2-201ENST00000335681 4007 ntAPPRIS P1 TSL 1 (best) BASIC15.3■□□□□ 0.04
RAI2Q9Y5P3 KITLG-202ENST00000347404 1948 ntTSL 1 (best) BASIC15.3■□□□□ 0.04
RAI2Q9Y5P3 ZMYND10-202ENST00000360165 1757 ntAPPRIS ALT1 TSL 1 (best) BASIC15.3■□□□□ 0.04
RAI2Q9Y5P3 TRA2A-202ENST00000392502 2229 ntAPPRIS ALT2 TSL 2 BASIC15.3■□□□□ 0.04
RAI2Q9Y5P3 CYB5R3-203ENST00000402438 1050 ntTSL 5 BASIC15.3■□□□□ 0.04
RAI2Q9Y5P3 NLRX1-202ENST00000409109 4092 ntAPPRIS P1 TSL 1 (best) BASIC15.3■□□□□ 0.04
RAI2Q9Y5P3 AC007319.1-202ENST00000412276 829 ntTSL 5 BASIC15.3■□□□□ 0.04
RAI2Q9Y5P3 RHD-204ENST00000417538 1333 ntAPPRIS ALT2 TSL 1 (best) BASIC15.3■□□□□ 0.04
RAI2Q9Y5P3 SYNPR-202ENST00000450542 1004 ntTSL 1 (best) BASIC15.3■□□□□ 0.04
RAI2Q9Y5P3 CTBP2P5-201ENST00000454986 1264 ntBASIC15.3■□□□□ 0.04
RAI2Q9Y5P3 AC115284.1-201ENST00000488257 547 ntTSL 4 BASIC15.3■□□□□ 0.04
RAI2Q9Y5P3 AC026434.2-201ENST00000506094 1078 ntBASIC15.3■□□□□ 0.04
RAI2Q9Y5P3 AC008808.1-201ENST00000508923 432 ntTSL 3 BASIC15.3■□□□□ 0.04
RAI2Q9Y5P3 LRRC6-205ENST00000519595 1736 ntAPPRIS ALT1 TSL 1 (best) BASIC15.3■□□□□ 0.04
RAI2Q9Y5P3 UBE2V2-205ENST00000521346 1322 ntTSL 3 BASIC15.3■□□□□ 0.04
RAI2Q9Y5P3 CHCHD7-211ENST00000521831 573 ntTSL 2 BASIC15.3■□□□□ 0.04
RAI2Q9Y5P3 C11orf16-202ENST00000525780 1685 ntTSL 1 (best) BASIC15.3■□□□□ 0.04
RAI2Q9Y5P3 USH1C-207ENST00000527720 2278 ntTSL 1 (best) BASIC15.3■□□□□ 0.04
RAI2Q9Y5P3 CCKBR-204ENST00000531712 463 ntTSL 1 (best) BASIC15.3■□□□□ 0.04
RAI2Q9Y5P3 OVOL1-AS1-202ENST00000532454 494 ntTSL 2 BASIC15.3■□□□□ 0.04
RAI2Q9Y5P3 HIRIP3-204ENST00000564026 988 ntTSL 2 BASIC15.3■□□□□ 0.04
RAI2Q9Y5P3 TBC1D3G-201ENST00000569055 2065 ntAPPRIS P1 TSL 1 (best) BASIC15.3■□□□□ 0.04
RAI2Q9Y5P3 GNRHR2-203ENST00000581100 1187 ntBASIC15.3■□□□□ 0.04
RAI2Q9Y5P3 AC087164.1-202ENST00000583062 2158 ntTSL 1 (best) BASIC15.3■□□□□ 0.04
Retrieved 100 of 98,524 protein–RNA pairs in 57.6 ms