Protein–RNA interactions for Protein: Q9NP79

VTA1, Vacuolar protein sorting-associated protein VTA1 homolog, humanhuman

Predictions only

Length 307 aa.

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Protein RNA Prediction (catRAPID) Interaction (ENCODE eCLIP)
Gene UniProt Accession Transcript Symbol Ensembl Transcript ID Length Transcript Status Prediction Score Prediction z-Score p-Value Fold Change
VTA1Q9NP79 GALNT6-201ENST00000356317 2809 ntAPPRIS P1 TSL 1 (best) BASIC16.76■□□□□ 0.27
VTA1Q9NP79 ZDHHC13-201ENST00000399351 2283 ntTSL 1 (best) BASIC16.76■□□□□ 0.27
VTA1Q9NP79 LSP1-204ENST00000406638 2640 ntAPPRIS ALT2 TSL 2 BASIC16.76■□□□□ 0.27
VTA1Q9NP79 PRMT2-207ENST00000440086 1932 ntTSL 1 (best) BASIC16.76■□□□□ 0.27
VTA1Q9NP79 ATG9B-212ENST00000639579 4539 ntAPPRIS P1 TSL 1 (best) BASIC16.76■□□□□ 0.27
VTA1Q9NP79 PLCXD2-204ENST00000477665 1721 ntTSL 1 (best) BASIC16.76■□□□□ 0.27
VTA1Q9NP79 AC009242.1-201ENST00000634300 2706 ntTSL 5 BASIC16.76■□□□□ 0.27
VTA1Q9NP79 SHANK1-204ENST00000391814 6622 ntAPPRIS ALT2 TSL 5 BASIC16.75■□□□□ 0.27
VTA1Q9NP79 THUMPD3-210ENST00000515662 2390 ntAPPRIS P1 TSL 1 (best) BASIC16.75■□□□□ 0.27
VTA1Q9NP79 HACE1-201ENST00000262903 4576 ntAPPRIS P1 TSL 1 (best) BASIC16.75■□□□□ 0.27
VTA1Q9NP79 ADRB1-201ENST00000369295 2853 ntAPPRIS P1 BASIC16.75■□□□□ 0.27
VTA1Q9NP79 ZC3H14-204ENST00000336693 2007 ntTSL 1 (best) BASIC16.75■□□□□ 0.27
VTA1Q9NP79 MFSD5-202ENST00000534842 2038 ntTSL 2 BASIC16.75■□□□□ 0.27
VTA1Q9NP79 RAB40B-206ENST00000571995 3859 ntAPPRIS P1 TSL 1 (best) BASIC16.75■□□□□ 0.27
VTA1Q9NP79 ARL8B-201ENST00000256496 3005 ntAPPRIS P1 TSL 1 (best) BASIC16.75■□□□□ 0.27
VTA1Q9NP79 UNC5D-203ENST00000416672 3532 ntAPPRIS ALT2 TSL 5 BASIC16.75■□□□□ 0.27
VTA1Q9NP79 RRM2-202ENST00000360566 3673 ntTSL 1 (best) BASIC16.75■□□□□ 0.27
VTA1Q9NP79 HMGXB3-202ENST00000503427 5275 ntAPPRIS ALT2 TSL 5 BASIC16.75■□□□□ 0.27
VTA1Q9NP79 SLC41A3-211ENST00000508835 1480 ntTSL 2 BASIC16.75■□□□□ 0.27
VTA1Q9NP79 TUBB4B-201ENST00000340384 1637 ntAPPRIS P1 TSL 1 (best) BASIC16.75■□□□□ 0.27
VTA1Q9NP79 AMT-204ENST00000427987 1646 ntTSL 5 BASIC16.75■□□□□ 0.27
VTA1Q9NP79 ALOX15-205ENST00000574640 2422 ntTSL 2 BASIC16.75■□□□□ 0.27
VTA1Q9NP79 AHDC1-202ENST00000374011 6438 ntAPPRIS P1 TSL 5 BASIC16.75■□□□□ 0.27
VTA1Q9NP79 CLIC5-208ENST00000544153 2051 ntTSL 2 BASIC16.75■□□□□ 0.27
VTA1Q9NP79 C6orf52-201ENST00000259983 619 ntAPPRIS P2 TSL 5 BASIC16.75■□□□□ 0.27
VTA1Q9NP79 GAD1-203ENST00000375272 1252 ntTSL 1 (best) BASIC16.75■□□□□ 0.27
VTA1Q9NP79 FXNP2-201ENST00000411625 547 ntBASIC16.75■□□□□ 0.27
VTA1Q9NP79 PDIA3P2-201ENST00000428073 158 ntBASIC16.75■□□□□ 0.27
VTA1Q9NP79 EEF1DP6-201ENST00000449232 372 ntBASIC16.75■□□□□ 0.27
VTA1Q9NP79 AL035414.1-201ENST00000451327 857 ntBASIC16.75■□□□□ 0.27
VTA1Q9NP79 AC234782.1-201ENST00000451950 919 ntBASIC16.75■□□□□ 0.27
VTA1Q9NP79 CICP12-201ENST00000455801 843 ntBASIC16.75■□□□□ 0.27
VTA1Q9NP79 AP001547.1-201ENST00000527440 374 ntTSL 3 BASIC16.75■□□□□ 0.27
VTA1Q9NP79 AC103988.2-201ENST00000561804 725 ntBASIC16.75■□□□□ 0.27
VTA1Q9NP79 AC105105.3-201ENST00000585470 646 ntTSL 5 BASIC16.75■□□□□ 0.27
VTA1Q9NP79 NDUFB5-216ENST00000611971 951 ntTSL 2 BASIC16.75■□□□□ 0.27
VTA1Q9NP79 NPIPB11-202ENST00000614927 1216 ntTSL 5 BASIC16.75■□□□□ 0.27
VTA1Q9NP79 LINC01517-203ENST00000616194 908 ntTSL 5 BASIC16.75■□□□□ 0.27
VTA1Q9NP79 TMBIM7P-203ENST00000641617 1718 ntBASIC16.75■□□□□ 0.27
VTA1Q9NP79 TBL3-205ENST00000568546 6803 ntAPPRIS P2 TSL 1 (best) BASIC16.75■□□□□ 0.27
VTA1Q9NP79 TACC3-201ENST00000313288 2781 ntAPPRIS P1 TSL 1 (best) BASIC16.75■□□□□ 0.27
VTA1Q9NP79 FGF11-201ENST00000293829 3063 ntAPPRIS P1 TSL 1 (best) BASIC16.75■□□□□ 0.27
VTA1Q9NP79 BCL2L13-206ENST00000399782 1381 ntAPPRIS ALT2 TSL 1 (best) BASIC16.75■□□□□ 0.27
VTA1Q9NP79 SH3PXD2B-203ENST00000519643 1394 ntTSL 1 (best) BASIC16.75■□□□□ 0.27
VTA1Q9NP79 RUNX1-201ENST00000300305 6222 ntAPPRIS P3 TSL 1 (best) BASIC16.75■□□□□ 0.27
VTA1Q9NP79 LTBR-201ENST00000228918 2260 ntAPPRIS P3 TSL 1 (best) BASIC16.75■□□□□ 0.27
VTA1Q9NP79 NPNT-201ENST00000305572 3003 ntTSL 1 (best) BASIC16.75■□□□□ 0.27
VTA1Q9NP79 SGPP1-201ENST00000247225 3312 ntAPPRIS P1 TSL 1 (best) BASIC16.75■□□□□ 0.27
VTA1Q9NP79 RGS6-210ENST00000553530 5685 ntAPPRIS P3 TSL 1 (best) BASIC16.74■□□□□ 0.27
VTA1Q9NP79 ANXA11-203ENST00000422982 2534 ntAPPRIS P3 TSL 1 (best) BASIC16.74■□□□□ 0.27
VTA1Q9NP79 TRPV4-204ENST00000536838 2514 ntTSL 1 (best) BASIC16.74■□□□□ 0.27
VTA1Q9NP79 IGSF8-202ENST00000368086 2366 ntAPPRIS P2 TSL 1 (best) BASIC16.74■□□□□ 0.27
VTA1Q9NP79 ZBED1P1-201ENST00000502364 1930 ntBASIC16.74■□□□□ 0.27
VTA1Q9NP79 MAGEB2-201ENST00000378988 1610 ntAPPRIS P1 TSL 1 (best) BASIC16.74■□□□□ 0.27
VTA1Q9NP79 HMBS-216ENST00000543090 1347 ntTSL 5 BASIC16.74■□□□□ 0.27
VTA1Q9NP79 SMARCD1-202ENST00000394963 3658 ntAPPRIS P1 TSL 1 (best) BASIC16.74■□□□□ 0.27
VTA1Q9NP79 CELF6-201ENST00000287202 3345 ntAPPRIS P3 TSL 1 (best) BASIC16.74■□□□□ 0.27
VTA1Q9NP79 TUBGCP2-204ENST00000417178 4029 ntTSL 2 BASIC16.74■□□□□ 0.27
VTA1Q9NP79 AC068418.2-201ENST00000577309 3703 ntBASIC16.74■□□□□ 0.27
VTA1Q9NP79 FXYD5-201ENST00000342879 1580 ntAPPRIS P2 TSL 1 (best) BASIC16.74■□□□□ 0.27
VTA1Q9NP79 NFATC1-207ENST00000545796 3558 ntTSL 2 BASIC16.74■□□□□ 0.27
VTA1Q9NP79 ACOT7-210ENST00000608083 1403 ntAPPRIS ALT2 TSL 1 (best) BASIC16.74■□□□□ 0.27
VTA1Q9NP79 MAP2K3-201ENST00000316920 1246 ntTSL 5 BASIC16.74■□□□□ 0.27
VTA1Q9NP79 C6orf136-202ENST00000376471 614 ntTSL 3 BASIC16.74■□□□□ 0.27
VTA1Q9NP79 APRT-201ENST00000378364 947 ntAPPRIS P1 TSL 1 (best) BASIC16.74■□□□□ 0.27
VTA1Q9NP79 AC078875.1-201ENST00000431907 724 ntBASIC16.74■□□□□ 0.27
VTA1Q9NP79 AL139412.1-202ENST00000452465 675 ntTSL 3 BASIC16.74■□□□□ 0.27
VTA1Q9NP79 PGRMC2-206ENST00000512483 1144 ntTSL 5 BASIC16.74■□□□□ 0.27
VTA1Q9NP79 CCNC-217ENST00000523985 958 ntTSL 2 BASIC16.74■□□□□ 0.27
VTA1Q9NP79 C14orf132-204ENST00000556728 774 ntAPPRIS P1 TSL 2 BASIC16.74■□□□□ 0.27
VTA1Q9NP79 PRKXP1-201ENST00000561423 1122 ntBASIC16.74■□□□□ 0.27
VTA1Q9NP79 MIR4722-201ENST00000578292 60 ntBASIC16.74■□□□□ 0.27
VTA1Q9NP79 AL645941.3-201ENST00000580587 577 ntTSL 4 BASIC16.74■□□□□ 0.27
VTA1Q9NP79 MIR4706-201ENST00000582134 82 ntBASIC16.74■□□□□ 0.27
VTA1Q9NP79 AC008763.1-201ENST00000601797 843 ntTSL 3 BASIC16.74■□□□□ 0.27
VTA1Q9NP79 NEAT1-203ENST00000601801 487 ntTSL 4 BASIC16.74■□□□□ 0.27
VTA1Q9NP79 CYP4B1-215ENST00000640628 969 ntTSL 5 BASIC16.74■□□□□ 0.27
VTA1Q9NP79 EVA1A-202ENST00000393913 1802 ntAPPRIS P2 TSL 1 (best) BASIC16.74■□□□□ 0.27
VTA1Q9NP79 RDX-201ENST00000343115 4491 ntAPPRIS P1 TSL 1 (best) BASIC16.74■□□□□ 0.27
VTA1Q9NP79 AC008969.1-201ENST00000550135 6438 ntTSL 2 BASIC16.74■□□□□ 0.27
VTA1Q9NP79 PLIN1-202ENST00000430628 2900 ntAPPRIS P1 TSL 5 BASIC16.74■□□□□ 0.27
VTA1Q9NP79 ICA1L-201ENST00000358299 3457 ntAPPRIS P1 TSL 2 BASIC16.74■□□□□ 0.27
VTA1Q9NP79 SLC45A1-202ENST00000471889 2784 ntTSL 5 BASIC16.74■□□□□ 0.27
VTA1Q9NP79 EEPD1-205ENST00000534978 2769 ntAPPRIS P1 TSL 2 BASIC16.74■□□□□ 0.27
VTA1Q9NP79 PCNP-201ENST00000265260 2342 ntAPPRIS P1 TSL 1 (best) BASIC16.74■□□□□ 0.27
VTA1Q9NP79 CLPTM1-203ENST00000546079 2342 ntTSL 2 BASIC16.74■□□□□ 0.27
VTA1Q9NP79 MXD1-201ENST00000264444 5587 ntAPPRIS P1 TSL 1 (best) BASIC16.74■□□□□ 0.27
VTA1Q9NP79 HLA-DQB2-231ENST00000435145 2026 ntBASIC16.74■□□□□ 0.27
VTA1Q9NP79 FAM227A-201ENST00000355830 2417 ntAPPRIS P5 TSL 5 BASIC16.74■□□□□ 0.27
VTA1Q9NP79 CCDC120-202ENST00000496529 2415 ntAPPRIS P3 TSL 2 BASIC16.74■□□□□ 0.27
VTA1Q9NP79 MBD1-204ENST00000347968 3091 ntTSL 1 (best) BASIC16.73■□□□□ 0.27
VTA1Q9NP79 KCNN2-201ENST00000264773 2512 ntAPPRIS P2 TSL 1 (best) BASIC16.73■□□□□ 0.27
VTA1Q9NP79 MAGEA1-201ENST00000356661 1710 ntAPPRIS P1 TSL 1 (best) BASIC16.73■□□□□ 0.27
VTA1Q9NP79 C9orf172-201ENST00000436881 4387 ntAPPRIS P1 BASIC16.73■□□□□ 0.27
VTA1Q9NP79 CASP6-202ENST00000352981 1347 ntTSL 1 (best) BASIC16.73■□□□□ 0.27
VTA1Q9NP79 ABHD15-201ENST00000307201 3592 ntAPPRIS P1 TSL 1 (best) BASIC16.73■□□□□ 0.27
VTA1Q9NP79 SLC4A3-201ENST00000273063 4246 ntTSL 1 (best) BASIC16.73■□□□□ 0.27
VTA1Q9NP79 DEPDC5-203ENST00000400242 2395 ntTSL 1 (best) BASIC16.73■□□□□ 0.27
VTA1Q9NP79 KIFC3-206ENST00000541240 3047 ntTSL 2 BASIC16.73■□□□□ 0.27
VTA1Q9NP79 ELAVL3-201ENST00000359227 4729 ntAPPRIS P3 TSL 3 BASIC16.73■□□□□ 0.27
Retrieved 100 of 98,524 protein–RNA pairs in 60 ms