Protein–RNA interactions for Protein: Q9BRL7

SEC22C, Vesicle-trafficking protein SEC22c, humanhuman

Predictions only

Length 303 aa.

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Protein RNA Prediction (catRAPID) Interaction (ENCODE eCLIP)
Gene UniProt Accession Transcript Symbol Ensembl Transcript ID Length Transcript Status Prediction Score Prediction z-Score p-Value Fold Change
SEC22CQ9BRL7 HOXB8-203ENST00000576562 743 ntAPPRIS ALT1 TSL 2 BASIC12.85□□□□□ -0.35
SEC22CQ9BRL7 KLK3-204ENST00000593997 1035 ntTSL 1 (best) BASIC12.85□□□□□ -0.35
SEC22CQ9BRL7 AC027682.4-201ENST00000605277 798 ntTSL 5 BASIC12.85□□□□□ -0.35
SEC22CQ9BRL7 LINC01607-201ENST00000607172 621 ntTSL 2 BASIC12.85□□□□□ -0.35
SEC22CQ9BRL7 TMEM114-205ENST00000624696 560 ntTSL 2 BASIC12.85□□□□□ -0.35
SEC22CQ9BRL7 DRD2-201ENST00000346454 2433 ntTSL 1 (best) BASIC12.85□□□□□ -0.35
SEC22CQ9BRL7 MAP7-202ENST00000432797 4375 ntAPPRIS ALT2 TSL 2 BASIC12.85□□□□□ -0.35
SEC22CQ9BRL7 AC012617.1-204ENST00000586340 2305 ntBASIC12.85□□□□□ -0.35
SEC22CQ9BRL7 SLC35E2-202ENST00000355439 2078 ntAPPRIS ALT2 TSL 1 (best) BASIC12.85□□□□□ -0.35
SEC22CQ9BRL7 DLL4-201ENST00000249749 3372 ntAPPRIS P1 TSL 1 (best) BASIC12.85□□□□□ -0.35
SEC22CQ9BRL7 ABCB9-203ENST00000346530 3399 ntTSL 5 BASIC12.85□□□□□ -0.35
SEC22CQ9BRL7 HDHD3-201ENST00000238379 1834 ntAPPRIS P1 TSL 1 (best) BASIC12.85□□□□□ -0.35
SEC22CQ9BRL7 PMP22-201ENST00000312280 1810 ntAPPRIS P1 TSL 1 (best) BASIC12.85□□□□□ -0.35
SEC22CQ9BRL7 NUP98-204ENST00000397004 3923 ntTSL 1 (best) BASIC12.85□□□□□ -0.35
SEC22CQ9BRL7 FTO-214ENST00000636218 2227 ntTSL 5 BASIC12.85□□□□□ -0.35
SEC22CQ9BRL7 AC092117.1-201ENST00000621230 3250 ntBASIC12.85□□□□□ -0.35
SEC22CQ9BRL7 TM4SF19-203ENST00000446879 1582 ntTSL 1 (best) BASIC12.85□□□□□ -0.35
SEC22CQ9BRL7 PNKD-203ENST00000273077 3021 ntAPPRIS P4 TSL 1 (best) BASIC12.85□□□□□ -0.35
SEC22CQ9BRL7 AC068760.1-201ENST00000493579 1953 ntBASIC12.85□□□□□ -0.35
SEC22CQ9BRL7 MX1-218ENST00000619682 1980 ntTSL 5 BASIC12.85□□□□□ -0.35
SEC22CQ9BRL7 HCG27-201ENST00000383331 1720 ntTSL 1 (best) BASIC12.85□□□□□ -0.35
SEC22CQ9BRL7 ZSCAN32-205ENST00000439568 1746 ntTSL 2 BASIC12.85□□□□□ -0.35
SEC22CQ9BRL7 RIC1-203ENST00000414202 6774 ntAPPRIS P1 TSL 5 BASIC12.85□□□□□ -0.35
SEC22CQ9BRL7 RNF170-209ENST00000534961 4116 ntAPPRIS P1 TSL 1 (best) BASIC12.85□□□□□ -0.35
SEC22CQ9BRL7 RMDN1-201ENST00000406452 3063 ntAPPRIS P1 TSL 1 (best) BASIC12.85□□□□□ -0.35
SEC22CQ9BRL7 TJAP1-204ENST00000372449 2695 ntTSL 5 BASIC12.85□□□□□ -0.35
SEC22CQ9BRL7 TJAP1-205ENST00000372452 2665 ntAPPRIS P1 TSL 5 BASIC12.85□□□□□ -0.35
SEC22CQ9BRL7 PATL2-208ENST00000560780 1863 ntAPPRIS ALT2 TSL 2 BASIC12.85□□□□□ -0.35
SEC22CQ9BRL7 DPYSL2-204ENST00000521913 4805 ntTSL 1 (best) BASIC12.85□□□□□ -0.35
SEC22CQ9BRL7 MICAL1-202ENST00000358807 3645 ntAPPRIS P3 TSL 1 (best) BASIC12.85□□□□□ -0.35
SEC22CQ9BRL7 CELF1-201ENST00000310513 4583 ntAPPRIS ALT1 TSL 1 (best) BASIC12.84□□□□□ -0.35
SEC22CQ9BRL7 ZIK1-204ENST00000597850 4181 ntAPPRIS P3 TSL 1 (best) BASIC12.84□□□□□ -0.35
SEC22CQ9BRL7 ZC2HC1A-201ENST00000263849 3352 ntAPPRIS P1 TSL 1 (best) BASIC12.84□□□□□ -0.35
SEC22CQ9BRL7 ELAC2-201ENST00000338034 3148 ntAPPRIS P1 TSL 1 (best) BASIC12.84□□□□□ -0.35
SEC22CQ9BRL7 TMBIM6-203ENST00000423828 3254 ntAPPRIS ALT2 TSL 2 BASIC12.84□□□□□ -0.35
SEC22CQ9BRL7 AP003555.1-202ENST00000511013 1755 ntTSL 1 (best) BASIC12.84□□□□□ -0.35
SEC22CQ9BRL7 OS9-206ENST00000435406 2346 ntTSL 2 BASIC12.84□□□□□ -0.35
SEC22CQ9BRL7 CLDN6-201ENST00000328796 1369 ntAPPRIS P1 TSL 1 (best) BASIC12.84□□□□□ -0.35
SEC22CQ9BRL7 MFAP4-202ENST00000395592 1932 ntAPPRIS ALT2 TSL 1 (best) BASIC12.84□□□□□ -0.35
SEC22CQ9BRL7 DHCR24-201ENST00000371269 4250 ntAPPRIS P1 TSL 1 (best) BASIC12.84□□□□□ -0.35
SEC22CQ9BRL7 IFNA6-202ENST00000380210 1544 ntAPPRIS P1 BASIC12.84□□□□□ -0.35
SEC22CQ9BRL7 MUTYH-211ENST00000456914 1692 ntAPPRIS ALT2 TSL 1 (best) BASIC12.84□□□□□ -0.35
SEC22CQ9BRL7 GATB-201ENST00000263985 2385 ntAPPRIS P1 TSL 1 (best) BASIC12.84□□□□□ -0.35
SEC22CQ9BRL7 FOXP1-202ENST00000318789 7114 ntAPPRIS P3 TSL 1 (best) BASIC12.84□□□□□ -0.35
SEC22CQ9BRL7 FOXP1-222ENST00000615603 7140 ntTSL 5 BASIC12.84□□□□□ -0.35
SEC22CQ9BRL7 ZNF541-202ENST00000314121 4631 ntAPPRIS ALT2 TSL 5 BASIC12.84□□□□□ -0.35
SEC22CQ9BRL7 ZFP64-203ENST00000361387 2545 ntAPPRIS P1 TSL 1 (best) BASIC12.84□□□□□ -0.35
SEC22CQ9BRL7 PNPLA5-205ENST00000597664 2537 ntAPPRIS P1 TSL 1 (best) BASIC12.84□□□□□ -0.35
SEC22CQ9BRL7 PLLP-205ENST00000613167 7578 ntTSL 5 BASIC12.84□□□□□ -0.35
SEC22CQ9BRL7 CELF4-201ENST00000334919 3542 ntAPPRIS ALT1 TSL 1 (best) BASIC12.84□□□□□ -0.35
SEC22CQ9BRL7 ATXN7-201ENST00000295900 7224 ntAPPRIS P3 TSL 1 (best) BASIC12.84□□□□□ -0.35
SEC22CQ9BRL7 LINC01121-201ENST00000378479 1095 ntTSL 1 (best) BASIC12.84□□□□□ -0.35
SEC22CQ9BRL7 CYTH4-203ENST00000405206 636 ntTSL 4 BASIC12.84□□□□□ -0.35
SEC22CQ9BRL7 SMIM19-202ENST00000416469 691 ntAPPRIS P1 TSL 1 (best) BASIC12.84□□□□□ -0.35
SEC22CQ9BRL7 TM4SF19-TCTEX1D2-201ENST00000442633 964 ntAPPRIS P1 TSL 1 (best) BASIC12.84□□□□□ -0.35
SEC22CQ9BRL7 LAMTOR4-205ENST00000468582 621 ntTSL 2 BASIC12.84□□□□□ -0.35
SEC22CQ9BRL7 ZNF7-218ENST00000544249 2125 ntTSL 2 BASIC12.84□□□□□ -0.35
SEC22CQ9BRL7 THTPA-204ENST00000554970 569 ntTSL 4 BASIC12.84□□□□□ -0.35
SEC22CQ9BRL7 THTPA-206ENST00000556015 535 ntTSL 3 BASIC12.84□□□□□ -0.35
SEC22CQ9BRL7 RPL28-209ENST00000560055 670 ntTSL 3 BASIC12.84□□□□□ -0.35
SEC22CQ9BRL7 AC002310.4-201ENST00000568114 377 ntAPPRIS P1 TSL 5 BASIC12.84□□□□□ -0.35
SEC22CQ9BRL7 OAZ1-202ENST00000582888 969 ntAPPRIS ALT1 TSL 5 BASIC12.84□□□□□ -0.35
SEC22CQ9BRL7 ATPAF2-213ENST00000585101 566 ntTSL 4 BASIC12.84□□□□□ -0.35
SEC22CQ9BRL7 LCE1C-202ENST00000607093 644 ntAPPRIS P2 BASIC12.84□□□□□ -0.35
SEC22CQ9BRL7 SPINK2-205ENST00000616980 677 ntTSL 5 BASIC12.84□□□□□ -0.35
SEC22CQ9BRL7 MIR1199-201ENST00000621445 119 ntBASIC12.84□□□□□ -0.35
SEC22CQ9BRL7 BORCS5-202ENST00000314565 4840 ntAPPRIS P1 TSL 1 (best) BASIC12.84□□□□□ -0.35
SEC22CQ9BRL7 SMOC2-202ENST00000356284 3117 ntAPPRIS P1 TSL 1 (best) BASIC12.84□□□□□ -0.35
SEC22CQ9BRL7 ANKRD11-203ENST00000378330 9132 ntAPPRIS P2 TSL 1 (best) BASIC12.84□□□□□ -0.35
SEC22CQ9BRL7 HYOU1-218ENST00000614668 1569 ntTSL 1 (best) BASIC12.84□□□□□ -0.35
SEC22CQ9BRL7 BEND5-201ENST00000371833 1716 ntAPPRIS P1 TSL 1 (best) BASIC12.84□□□□□ -0.35
SEC22CQ9BRL7 AC098936.1-201ENST00000442318 2885 ntTSL 2 BASIC12.84□□□□□ -0.35
SEC22CQ9BRL7 MAP7-201ENST00000354570 4152 ntAPPRIS P3 TSL 1 (best) BASIC12.84□□□□□ -0.35
SEC22CQ9BRL7 KARS-201ENST00000302445 2005 ntTSL 1 (best) BASIC12.84□□□□□ -0.35
SEC22CQ9BRL7 UQCRFS1-201ENST00000304863 3475 ntAPPRIS P1 TSL 1 (best) BASIC12.84□□□□□ -0.35
SEC22CQ9BRL7 ARGLU1-203ENST00000400198 3390 ntTSL 1 (best) BASIC12.84□□□□□ -0.35
SEC22CQ9BRL7 LSMEM2-201ENST00000316436 1494 ntAPPRIS P1 TSL 1 (best) BASIC12.84□□□□□ -0.35
SEC22CQ9BRL7 MAGEF1-201ENST00000317897 1636 ntAPPRIS P1 BASIC12.84□□□□□ -0.35
SEC22CQ9BRL7 LCOR-203ENST00000371097 4852 ntAPPRIS P3 TSL 1 (best) BASIC12.84□□□□□ -0.35
SEC22CQ9BRL7 ATL3-203ENST00000538786 1920 ntAPPRIS ALT2 TSL 2 BASIC12.84□□□□□ -0.35
SEC22CQ9BRL7 LRSAM1-203ENST00000373322 2849 ntAPPRIS P1 TSL 1 (best) BASIC12.84□□□□□ -0.35
SEC22CQ9BRL7 INTS5-201ENST00000330574 3285 ntAPPRIS P1 TSL 1 (best) BASIC12.84□□□□□ -0.35
SEC22CQ9BRL7 NTRK2-203ENST00000323115 3708 ntAPPRIS ALT1 TSL 1 (best) BASIC12.84□□□□□ -0.35
SEC22CQ9BRL7 AC125611.4-201ENST00000553259 4166 ntTSL 2 BASIC12.84□□□□□ -0.35
SEC22CQ9BRL7 AC090505.1-201ENST00000430515 1834 ntBASIC12.83□□□□□ -0.35
SEC22CQ9BRL7 R3HDML-201ENST00000217043 1377 ntAPPRIS P1 TSL 1 (best) BASIC12.83□□□□□ -0.36
SEC22CQ9BRL7 SNRPF-201ENST00000266735 1389 ntAPPRIS P1 TSL 1 (best) BASIC12.83□□□□□ -0.36
SEC22CQ9BRL7 ABCC6P1-201ENST00000546162 2943 ntTSL 2 BASIC12.83□□□□□ -0.36
SEC22CQ9BRL7 WASHC2C-210ENST00000623400 4616 ntAPPRIS ALT2 TSL 1 (best) BASIC12.83□□□□□ -0.36
SEC22CQ9BRL7 AP001972.5-201ENST00000624624 2338 ntBASIC12.83□□□□□ -0.36
SEC22CQ9BRL7 GFAP-201ENST00000253408 3135 ntTSL 5 BASIC12.83□□□□□ -0.36
SEC22CQ9BRL7 MPL-202ENST00000413998 1887 ntAPPRIS ALT2 TSL 1 (best) BASIC12.83□□□□□ -0.36
SEC22CQ9BRL7 GOLGA8H-201ENST00000566740 1899 ntAPPRIS P1 TSL 5 BASIC12.83□□□□□ -0.36
SEC22CQ9BRL7 GOLGA8J-201ENST00000567927 1899 ntAPPRIS P1 TSL 5 BASIC12.83□□□□□ -0.36
SEC22CQ9BRL7 NFKB1-201ENST00000226574 4085 ntAPPRIS P3 TSL 1 (best) BASIC12.83□□□□□ -0.36
SEC22CQ9BRL7 CEMIP-201ENST00000220244 7226 ntAPPRIS P1 TSL 1 (best) BASIC12.83□□□□□ -0.36
SEC22CQ9BRL7 PI4KA-201ENST00000255882 6752 ntAPPRIS P1 TSL 1 (best) BASIC12.83□□□□□ -0.36
SEC22CQ9BRL7 OPA1-202ENST00000361510 6492 ntAPPRIS ALT2 TSL 5 BASIC12.83□□□□□ -0.36
SEC22CQ9BRL7 ECHDC1-220ENST00000528402 1449 ntTSL 1 (best) BASIC12.83□□□□□ -0.36
SEC22CQ9BRL7 EFCAB2-203ENST00000366523 1233 ntAPPRIS P1 TSL 3 BASIC12.83□□□□□ -0.36
Retrieved 100 of 98,524 protein–RNA pairs in 66.7 ms