Protein–RNA interactions for Protein: Q8N5M4

TTC9C, Tetratricopeptide repeat protein 9C, humanhuman

Predictions only

Length 171 aa.

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Protein RNA Prediction (catRAPID) Interaction (ENCODE eCLIP)
Gene UniProt Accession Transcript Symbol Ensembl Transcript ID Length Transcript Status Prediction Score Prediction z-Score p-Value Fold Change
TTC9CQ8N5M4 HMOX2-204ENST00000414777 1752 ntAPPRIS P1 TSL 5 BASIC12.02□□□□□ -0.49
TTC9CQ8N5M4 NEK11-205ENST00000507910 1841 ntAPPRIS ALT2 TSL 1 (best) BASIC12.02□□□□□ -0.49
TTC9CQ8N5M4 FKBP6-204ENST00000431982 1446 ntAPPRIS ALT2 TSL 2 BASIC12.02□□□□□ -0.49
TTC9CQ8N5M4 ACOT7-210ENST00000608083 1403 ntAPPRIS ALT2 TSL 1 (best) BASIC12.02□□□□□ -0.49
TTC9CQ8N5M4 LINGO1-201ENST00000355300 3055 ntAPPRIS P1 TSL 1 (best) BASIC12.02□□□□□ -0.49
TTC9CQ8N5M4 FAM219A-204ENST00000379081 3543 ntTSL 5 BASIC12.02□□□□□ -0.49
TTC9CQ8N5M4 CICP23-201ENST00000605013 2741 ntBASIC12.02□□□□□ -0.49
TTC9CQ8N5M4 EHF-210ENST00000531794 1481 ntTSL 1 (best) BASIC12.02□□□□□ -0.49
TTC9CQ8N5M4 REC8-209ENST00000611366 2331 ntAPPRIS P1 TSL 1 (best) BASIC12.02□□□□□ -0.49
TTC9CQ8N5M4 PTPRU-205ENST00000460170 5337 ntTSL 1 (best) BASIC12.01□□□□□ -0.49
TTC9CQ8N5M4 PDZD4-201ENST00000164640 3689 ntAPPRIS P3 TSL 1 (best) BASIC12.01□□□□□ -0.49
TTC9CQ8N5M4 SRSF5-203ENST00000553521 2815 ntAPPRIS P1 TSL 1 (best) BASIC12.01□□□□□ -0.49
TTC9CQ8N5M4 GNB2-202ENST00000393924 1524 ntAPPRIS P1 TSL 1 (best) BASIC12.01□□□□□ -0.49
TTC9CQ8N5M4 TPO-203ENST00000346956 2923 ntTSL 5 BASIC12.01□□□□□ -0.49
TTC9CQ8N5M4 UBE4B-201ENST00000253251 4772 ntAPPRIS P1 TSL 1 (best) BASIC12.01□□□□□ -0.49
TTC9CQ8N5M4 EPHA5-202ENST00000354839 3427 ntAPPRIS ALT2 TSL 1 (best) BASIC12.01□□□□□ -0.49
TTC9CQ8N5M4 MFRP-205ENST00000619721 3917 ntAPPRIS P1 TSL 1 (best) BASIC12.01□□□□□ -0.49
TTC9CQ8N5M4 GAK-201ENST00000314167 4442 ntAPPRIS P1 TSL 1 (best) BASIC12.01□□□□□ -0.49
TTC9CQ8N5M4 AC073082.1-201ENST00000602369 2103 ntAPPRIS P1 TSL 5 BASIC12.01□□□□□ -0.49
TTC9CQ8N5M4 APC2-201ENST00000233607 10151 ntAPPRIS P1 TSL 1 (best) BASIC12.01□□□□□ -0.49
TTC9CQ8N5M4 GOPC-201ENST00000052569 4590 ntAPPRIS P1 TSL 1 (best) BASIC12.01□□□□□ -0.49
TTC9CQ8N5M4 AKT1S1-205ENST00000391833 3640 ntAPPRIS P1 TSL 2 BASIC12.01□□□□□ -0.49
TTC9CQ8N5M4 RBM26-203ENST00000438737 4132 ntTSL 5 BASIC12.01□□□□□ -0.49
TTC9CQ8N5M4 PTBP1-201ENST00000349038 3155 ntAPPRIS P3 TSL 1 (best) BASIC12.01□□□□□ -0.49
TTC9CQ8N5M4 BCAR1-207ENST00000538440 3192 ntAPPRIS ALT2 TSL 2 BASIC12.01□□□□□ -0.49
TTC9CQ8N5M4 PHLDB2-204ENST00000431670 6127 ntAPPRIS P1 TSL 1 (best) BASIC12.01□□□□□ -0.49
TTC9CQ8N5M4 HNRNPU-204ENST00000440865 3207 ntTSL 2 BASIC12.01□□□□□ -0.49
TTC9CQ8N5M4 CSPG4-201ENST00000308508 8290 ntAPPRIS P1 TSL 1 (best) BASIC12.01□□□□□ -0.49
TTC9CQ8N5M4 GRIN2C-201ENST00000293190 4261 ntAPPRIS P3 TSL 1 (best) BASIC12.01□□□□□ -0.49
TTC9CQ8N5M4 BAG1-210ENST00000634734 3786 ntAPPRIS ALT2 TSL 1 (best) BASIC12.01□□□□□ -0.49
TTC9CQ8N5M4 MAPT-213ENST00000571987 2277 ntAPPRIS P4 TSL 5 BASIC12.01□□□□□ -0.49
TTC9CQ8N5M4 CLEC1B-201ENST00000298527 952 ntAPPRIS P1 TSL 1 (best) BASIC12.01□□□□□ -0.49
TTC9CQ8N5M4 ZSCAN2-203ENST00000334141 993 ntTSL 1 (best) BASIC12.01□□□□□ -0.49
TTC9CQ8N5M4 PXMP4-202ENST00000344022 989 ntTSL 2 BASIC12.01□□□□□ -0.49
TTC9CQ8N5M4 SLC18B1-202ENST00000367918 472 ntTSL 5 BASIC12.01□□□□□ -0.49
TTC9CQ8N5M4 SPDYC-201ENST00000377185 991 ntAPPRIS P1 TSL 1 (best) BASIC12.01□□□□□ -0.49
TTC9CQ8N5M4 BAX-206ENST00000415969 540 ntTSL 1 (best) BASIC12.01□□□□□ -0.49
TTC9CQ8N5M4 FXYD1-202ENST00000455515 594 ntAPPRIS P1 TSL 2 BASIC12.01□□□□□ -0.49
TTC9CQ8N5M4 AC078785.1-203ENST00000467342 573 ntTSL 4 BASIC12.01□□□□□ -0.49
TTC9CQ8N5M4 AP001360.1-202ENST00000526934 479 ntTSL 3 BASIC12.01□□□□□ -0.49
TTC9CQ8N5M4 AP006333.1-201ENST00000543817 575 ntTSL 4 BASIC12.01□□□□□ -0.49
TTC9CQ8N5M4 AL132639.3-201ENST00000556537 530 ntTSL 4 BASIC12.01□□□□□ -0.49
TTC9CQ8N5M4 AC124287.1-201ENST00000582249 838 ntTSL 3 BASIC12.01□□□□□ -0.49
TTC9CQ8N5M4 TUBB6-203ENST00000586653 788 ntTSL 2 BASIC12.01□□□□□ -0.49
TTC9CQ8N5M4 AC005262.2-201ENST00000587701 452 ntTSL 5 BASIC12.01□□□□□ -0.49
TTC9CQ8N5M4 KXD1-204ENST00000595073 1095 ntAPPRIS P1 TSL 5 BASIC12.01□□□□□ -0.49
TTC9CQ8N5M4 AL359258.3-201ENST00000622910 2331 ntBASIC12.01□□□□□ -0.49
TTC9CQ8N5M4 HDHD3-201ENST00000238379 1834 ntAPPRIS P1 TSL 1 (best) BASIC12.01□□□□□ -0.49
TTC9CQ8N5M4 CMPK1-203ENST00000371873 2930 ntAPPRIS P1 TSL 1 (best) BASIC12.01□□□□□ -0.49
TTC9CQ8N5M4 LEF1-202ENST00000379951 3477 ntTSL 1 (best) BASIC12.01□□□□□ -0.49
TTC9CQ8N5M4 KCNMA1-219ENST00000480683 2963 ntTSL 1 (best) BASIC12.01□□□□□ -0.49
TTC9CQ8N5M4 COX10-AS1-202ENST00000449363 1944 ntTSL 2 BASIC12.01□□□□□ -0.49
TTC9CQ8N5M4 GSTO2-203ENST00000450629 1391 ntTSL 5 BASIC12.01□□□□□ -0.49
TTC9CQ8N5M4 CELF4-223ENST00000603232 1906 ntAPPRIS ALT1 TSL 1 (best) BASIC12.01□□□□□ -0.49
TTC9CQ8N5M4 GGT6-201ENST00000301395 2534 ntTSL 2 BASIC12.01□□□□□ -0.49
TTC9CQ8N5M4 KRT8P22-201ENST00000562317 1415 ntBASIC12.01□□□□□ -0.49
TTC9CQ8N5M4 LINC00221-202ENST00000619530 1499 ntTSL 2 BASIC12.01□□□□□ -0.49
TTC9CQ8N5M4 PODN-202ENST00000371500 3287 ntAPPRIS ALT2 TSL 1 (best) BASIC12.01□□□□□ -0.49
TTC9CQ8N5M4 BRF1-203ENST00000379937 3314 ntTSL 1 (best) BASIC12.01□□□□□ -0.49
TTC9CQ8N5M4 NDUFV1-202ENST00000415352 1512 ntAPPRIS ALT1 TSL 2 BASIC12.01□□□□□ -0.49
TTC9CQ8N5M4 RDM1-224ENST00000619262 1535 ntAPPRIS ALT2 TSL 1 (best) BASIC12.01□□□□□ -0.49
TTC9CQ8N5M4 MGRN1-202ENST00000399577 6425 ntAPPRIS ALT2 TSL 1 (best) BASIC12.01□□□□□ -0.49
TTC9CQ8N5M4 GTF2IRD1-205ENST00000476977 5868 ntTSL 1 (best) BASIC12.01□□□□□ -0.49
TTC9CQ8N5M4 PCM1-201ENST00000325083 6820 ntAPPRIS P1 TSL 1 (best) BASIC12□□□□□ -0.49
TTC9CQ8N5M4 INSIG1-201ENST00000340368 3010 ntAPPRIS P1 TSL 1 (best) BASIC12□□□□□ -0.49
TTC9CQ8N5M4 ZNF772-202ENST00000356584 1799 ntAPPRIS ALT2 TSL 2 BASIC12□□□□□ -0.49
TTC9CQ8N5M4 ITSN1-210ENST00000399353 3913 ntTSL 1 (best) BASIC12□□□□□ -0.49
TTC9CQ8N5M4 AIFM2-202ENST00000373248 2570 ntAPPRIS P1 TSL 1 (best) BASIC12□□□□□ -0.49
TTC9CQ8N5M4 RCOR2-201ENST00000301459 2604 ntAPPRIS P1 TSL 1 (best) BASIC12□□□□□ -0.49
TTC9CQ8N5M4 RNASEH1-201ENST00000315212 1887 ntAPPRIS P1 TSL 1 (best) BASIC12□□□□□ -0.49
TTC9CQ8N5M4 TOM1L1-201ENST00000348161 1895 ntTSL 2 BASIC12□□□□□ -0.49
TTC9CQ8N5M4 NIPA1-201ENST00000337435 6567 ntAPPRIS P4 TSL 1 (best) BASIC12□□□□□ -0.49
TTC9CQ8N5M4 CICP24-201ENST00000605464 2705 ntBASIC12□□□□□ -0.49
TTC9CQ8N5M4 ZMYM3-206ENST00000373988 6021 ntAPPRIS ALT1 TSL 5 BASIC12□□□□□ -0.49
TTC9CQ8N5M4 SYCE1-202ENST00000343131 1113 ntAPPRIS ALT2 TSL 1 (best) BASIC12□□□□□ -0.49
TTC9CQ8N5M4 CALY-202ENST00000368555 783 ntTSL 2 BASIC12□□□□□ -0.49
TTC9CQ8N5M4 ZNF165-201ENST00000377325 2107 ntAPPRIS P1 TSL 1 (best) BASIC12□□□□□ -0.49
TTC9CQ8N5M4 RTN4RL2-202ENST00000395120 582 ntTSL 1 (best) BASIC12□□□□□ -0.49
TTC9CQ8N5M4 MIOX-203ENST00000395733 1021 ntTSL 1 (best) BASIC12□□□□□ -0.49
TTC9CQ8N5M4 PES1-204ENST00000402284 2144 ntTSL 5 BASIC12□□□□□ -0.49
TTC9CQ8N5M4 PIN1P1-201ENST00000412108 996 ntBASIC12□□□□□ -0.49
TTC9CQ8N5M4 SOCS2P1-201ENST00000417727 557 ntBASIC12□□□□□ -0.49
TTC9CQ8N5M4 AC073133.1-201ENST00000426187 432 ntTSL 3 BASIC12□□□□□ -0.49
TTC9CQ8N5M4 AL022316.1-201ENST00000428765 572 ntTSL 4 BASIC12□□□□□ -0.49
TTC9CQ8N5M4 MYCLP2-201ENST00000449268 967 ntBASIC12□□□□□ -0.49
TTC9CQ8N5M4 CXorf40A-211ENST00000450602 1204 ntAPPRIS P3 TSL 3 BASIC12□□□□□ -0.49
TTC9CQ8N5M4 KRBOX4-206ENST00000478600 730 ntAPPRIS ALT2 TSL 2 BASIC12□□□□□ -0.49
TTC9CQ8N5M4 KRBOX4-207ENST00000487081 1247 ntAPPRIS ALT2 TSL 1 (best) BASIC12□□□□□ -0.49
TTC9CQ8N5M4 AC025442.1-201ENST00000521596 481 ntTSL 2 BASIC12□□□□□ -0.49
TTC9CQ8N5M4 AC008750.2-202ENST00000532688 729 ntTSL 3 BASIC12□□□□□ -0.49
TTC9CQ8N5M4 AC009088.3-201ENST00000563605 357 ntTSL 3 BASIC12□□□□□ -0.49
TTC9CQ8N5M4 RN7SL204P-201ENST00000582831 262 ntBASIC12□□□□□ -0.49
TTC9CQ8N5M4 NOP53-AS1-201ENST00000602048 540 ntTSL 4 BASIC12□□□□□ -0.49
TTC9CQ8N5M4 AC133539.2-201ENST00000604757 467 ntBASIC12□□□□□ -0.49
TTC9CQ8N5M4 ALDH3B1-203ENST00000612297 1231 ntTSL 3 BASIC12□□□□□ -0.49
TTC9CQ8N5M4 KISS1-202ENST00000625357 435 ntAPPRIS ALT2 TSL 5 BASIC12□□□□□ -0.49
TTC9CQ8N5M4 ZNF618-201ENST00000288466 9109 ntAPPRIS P3 TSL 2 BASIC12□□□□□ -0.49
TTC9CQ8N5M4 CROT-201ENST00000331536 3175 ntAPPRIS P1 TSL 1 (best) BASIC12□□□□□ -0.49
TTC9CQ8N5M4 ANKRD50-202ENST00000515641 4212 ntTSL 2 BASIC12□□□□□ -0.49
TTC9CQ8N5M4 C4B-201ENST00000425700 5237 ntTSL 1 (best) BASIC12□□□□□ -0.49
Retrieved 100 of 98,524 protein–RNA pairs in 42.5 ms